Clone Information

BLAST Search Result

Clone Name	rbart46f06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	WDTC1_MOUSE (Q80ZK9) WD and tetratricopeptide repeats protein 1	62	1e-09
2	WDTC1_HUMAN (Q8N5D0) WD and tetratricopeptide repeats protein 1	62	1e-09
3	Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124	43	7e-04
4	WDR71_HUMAN (Q9BRP4) WD-repeat protein 71 (Protein G-16)	38	0.017
5	WDR71_CHICK (Q5ZK69) WD-repeat protein 71	38	0.022
6	Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800	37	0.029
7	WDR22_MOUSE (Q80T85) WD-repeat protein 22	37	0.049
8	WDR22_HUMAN (Q96JK2) WD-repeat protein 22 (Breakpoint cluster re...	37	0.049
9	KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Kat...	35	0.11
10	PFS2_YEAST (P42841) Protein PFS2	34	0.24
11	KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog	34	0.32
12	YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4	33	0.71
13	TAF5_DROME (P49846) Transcription initiation factor TFIID subuni...	32	0.93
14	WDS_DROME (Q9V3J8) Protein will die slowly	32	0.93
15	MORG1_XENTR (Q5XGI5) Mitogen-activated protein kinase organizer ...	32	0.93
16	MORG1_XENLA (Q3KQ62) Mitogen-activated protein kinase organizer ...	32	0.93
17	WDR12_HUMAN (Q9GZL7) WD-repeat protein 12 (YTM1 homolog)	32	1.6
18	KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Kat...	32	1.6
19	YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2	32	1.6
20	NLE1_BOVIN (Q58D20) Notchless homolog 1	32	1.6
21	KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Kat...	32	1.6
22	KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Kat...	32	1.6
23	WDR12_RAT (P61480) WD-repeat protein 12	31	2.1
24	WDR12_MOUSE (Q9JJA4) WD-repeat protein 12 (YTM1 homolog)	31	2.1
25	PRP4_ARATH (O22212) U4/U6 small nuclear ribonucleoprotein PRP4-l...	31	2.1
26	WDR26_MOUSE (Q8C6G8) WD-repeat protein 26	31	2.1
27	WDR26_HUMAN (Q9H7D7) WD-repeat protein 26	31	2.1
28	WDR57_MOUSE (Q6PE01) WD-repeat protein 57	31	2.7
29	TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subuni...	31	2.7
30	PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20	31	2.7
31	MORG1_BRARE (Q6DH44) Mitogen-activated protein kinase organizer ...	31	2.7
32	KTNB1_ARATH (Q8H0T9) Katanin p80 WD40-containing subunit B1 homo...	31	2.7
33	WDR57_PONPY (Q5RF51) WD-repeat protein 57	31	2.7
34	WDR57_HUMAN (Q96DI7) WD-repeat protein 57 (Prp8-binding protein)...	31	2.7
35	WSB2_MOUSE (O54929) WD repeat and SOCS box-containing protein 2 ...	31	2.7
36	PWP2_YEAST (P25635) Periodic tryptophan protein 2 (U3 small nucl...	31	2.7
37	TAF5_HUMAN (Q15542) Transcription initiation factor TFIID subuni...	30	3.5
38	WSB2_HUMAN (Q9NYS7) WD repeat and SOCS box-containing protein 2 ...	30	3.5
39	TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associ...	30	4.6
40	HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1	30	4.6
41	WDR5_MOUSE (P61965) WD-repeat protein 5 (BMP2-induced 3-kb gene ...	30	4.6
42	WDR5_HUMAN (P61964) WD-repeat protein 5 (BMP2-induced 3-kb gene ...	30	4.6
43	TAF73_SCHPO (O74319) Transcription initiation factor TFIID subun...	30	4.6
44	MAK11_YEAST (P20484) Protein MAK11 (Maintenance of killer protei...	30	4.6
45	TAF5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associ...	30	6.0
46	Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143	30	6.0
47	YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466	30	6.0
48	HEX_ADE01 (Q04965) Hexon protein (Late protein 2) (Fragment)	30	6.0
49	WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A	30	6.0
50	HEX_ADEB3 (P03278) Hexon protein (Late protein 2)	29	7.9
51	GBLP_DICDI (P46800) Guanine nucleotide-binding protein beta subu...	29	7.9
52	WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A	29	7.9
53	WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A	29	7.9
54	COPA_YEAST (P53622) Coatomer subunit alpha (Alpha-coat protein) ...	29	7.9
55	THOC6_RAT (Q6AY87) THO complex subunit 6 homolog (WD-repeat prot...	29	7.9
56	GBB2_CAEEL (Q20636) Guanine nucleotide-binding protein beta subu...	29	7.9
57	SEL10_CAEEL (Q93794) F-box/WD-repeat protein sel-10 (Suppressor/...	29	7.9

>WDTC1_MOUSE (Q80ZK9) WD and tetratricopeptide repeats protein 1|
          Length = 677

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = -1

Query: 556 FIWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTP 416
           FIW K   N +R ++GDE IVNC++PHP    +A+SGID  V+LW P
Sbjct: 563 FIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNP 609

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>WDTC1_HUMAN (Q8N5D0) WD and tetratricopeptide repeats protein 1|
          Length = 677

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = -1

Query: 556 FIWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTP 416
           FIW K   N +R ++GDE IVNC++PHP    +A+SGID  V+LW P
Sbjct: 563 FIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNP 609

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>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124|
          Length = 1683

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTPS 413
            IWR RDG  L+ + G +  VN +   P   T+AS+  DN VKLW  S
Sbjct: 1430 IWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVS 1476



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
            +W ++DG  L+ + G +  VN +   P   T+AS+  D  +KLW
Sbjct: 1223 LWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLW 1266



 Score = 38.1 bits (87), Expect = 0.017
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTPS 413
            +W  RDG   R + G E  V  +   P   TIAS G D  +KLW  S
Sbjct: 1098 LW-SRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTS 1143



 Score = 36.6 bits (83), Expect = 0.049
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
            +W+  DG  L+ + G E  VN +   P    +AS+  D+ +KLW
Sbjct: 1139 LWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLW 1182



 Score = 33.1 bits (74), Expect = 0.54
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
            +WR  DG+ L    G   +V      P    IAS+  D  VK+W
Sbjct: 1556 LWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIW 1599



 Score = 32.7 bits (73), Expect = 0.71
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
            +W  +DG+ L+ + G++ I   I   P    IAS+  D  VK+W
Sbjct: 1389 LWHSQDGSLLKTLPGNKAIYG-ISFTPQGDLIASANADKTVKIW 1431



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
            +W    GN ++++     +V  +  +P    +AS+  D  VKLW
Sbjct: 1514 LWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLW 1557



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
            +WR  DG  ++ ++G    V  +        IAS+  DN +KLW
Sbjct: 1265 LWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLW 1308



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
            +W   DG F + ++G    V  +   P    IAS+  D  ++LW
Sbjct: 1472 LWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLW 1515



 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
            +W    G  L  + G    V  +   P   TIA+   D  VKLW
Sbjct: 1181 LWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLW 1224

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>WDR71_HUMAN (Q9BRP4) WD-repeat protein 71 (Protein G-16)|
          Length = 392

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWT 419
           IW+  +G   R +EG    VNC    P  + + S G+D  +K+W+
Sbjct: 118 IWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWS 162

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>WDR71_CHICK (Q5ZK69) WD-repeat protein 71|
          Length = 392

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWT 419
           IW+  +G   R +EG    VNC    P  + + S G+D  +K+W+
Sbjct: 118 IWQAANGEIRRLLEGHVYDVNCCRFFPSGLVVLSGGMDAQLKIWS 162

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>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800|
          Length = 1258

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTPS 413
           +W  +DG  L+ + G    V C+   P   T+ASS  D+ +KLW  S
Sbjct: 752 LWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVS 798



 Score = 35.8 bits (81), Expect = 0.084
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W  RDG  ++ + G E  V  +  HP   T+AS+  D  +KLW
Sbjct: 710 LWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLW 753



 Score = 33.1 bits (74), Expect = 0.54
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTPS 413
            +W  + G ++ ++EG    +  I   P + T+AS+  D+ V+LW  S
Sbjct: 962  LWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNIS 1008

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>WDR22_MOUSE (Q80T85) WD-repeat protein 22|
          Length = 946

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTP 416
           I R  +G F+  ++G   IVN +  +PH   I SSG++  +K+W+P
Sbjct: 318 IGRVVNGAFM-VLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP 362

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>WDR22_HUMAN (Q96JK2) WD-repeat protein 22 (Breakpoint cluster region protein 2)|
           (BCRP2)
          Length = 942

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTP 416
           I R  +G F+  ++G   IVN +  +PH   I SSG++  +K+W+P
Sbjct: 318 IGRVVNGAFM-VLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP 362

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>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 657

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W       LR + G +  +  ++ HP+   +AS  +D D+KLW
Sbjct: 88  VWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 131

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>PFS2_YEAST (P42841) Protein PFS2|
          Length = 465

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTP 416
           IW   +G   R + G    V   + HP    IAS+  DN VKLW P
Sbjct: 203 IWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWDP 248

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>KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog|
          Length = 694

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W       LR + G +  ++ ++ HP    +AS  +D+++KLW
Sbjct: 89  LWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLW 132



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W    G  +         VN ++ HP+   +AS   D  VKLW
Sbjct: 173 LWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLW 216

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>YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4|
          Length = 395

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -1

Query: 556 FIWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDND--VKLW 422
           +IW  +    L+ ++G    V C + HP    IAS+ ++ D  +K+W
Sbjct: 345 YIWNLQTREILQTLDGHNTAVMCTDCHPGQNIIASAALEPDMRIKIW 391

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>TAF5_DROME (P49846) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 85 kDa subunit)
           (p85) (TAFII-80)
          Length = 704

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W       LR   G    V+C++ HP++  +A+   D  V+LW
Sbjct: 518 LWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLW 561

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>WDS_DROME (Q9V3J8) Protein will die slowly|
          Length = 361

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -1

Query: 556 FIWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDND--VKLW 422
           +IW  +    ++ ++G    V C   HP    IAS+ ++ND  +KLW
Sbjct: 311 YIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357

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>MORG1_XENTR (Q5XGI5) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 314

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W    G  +R   G    VNC++ +  A  I S  ID+ ++ W
Sbjct: 93  LWDVAQGQVVRKFRGHAGKVNCVQFNEEATVIMSGSIDSSIRCW 136

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>MORG1_XENLA (Q3KQ62) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 314

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W    G  +R   G    VNC++ +  A  I S  ID+ ++ W
Sbjct: 93  LWDVAQGQVVRKFRGHAGKVNCVQFNEEATVIISGSIDSSIRCW 136

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>WDR12_HUMAN (Q9GZL7) WD-repeat protein 12 (YTM1 homolog)|
          Length = 423

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTP 416
           +W    G+    + G++ + NCI   P    +AS   D  ++LW P
Sbjct: 282 VWDVESGSLKSTLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDP 326

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>KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 655

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W       LR + G +  +  ++ HP+   +AS   D ++KLW
Sbjct: 89  VWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132



 Score = 29.3 bits (64), Expect = 7.9
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W    G  +    G    VN +E HP+   +AS   D  ++ W
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216

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>YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2|
          Length = 501

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 535 GNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           G  LR M G    V C   +P +  IAS+G D  V++W
Sbjct: 287 GACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVW 324

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>NLE1_BOVIN (Q58D20) Notchless homolog 1|
          Length = 485

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -1

Query: 556 FIWRK-RDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           F+W    D   L  M G + ++N +   P +  IAS+  D  +KLW
Sbjct: 354 FLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLW 399

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>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 690

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           I+       +R + G    + C++ HP    +AS   D +VKLW
Sbjct: 85  IYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLW 128

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>KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 658

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W       LR + G +  +  ++ HP+   +AS   D ++KLW
Sbjct: 89  VWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132



 Score = 29.3 bits (64), Expect = 7.9
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W    G  +    G    VN +E HP+   +AS   D  ++ W
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216

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>WDR12_RAT (P61480) WD-repeat protein 12|
          Length = 423

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTP 416
           +W    G     + G++ + NCI   P    +AS   D  ++LW P
Sbjct: 282 VWDVESGGLKSTLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDP 326

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>WDR12_MOUSE (Q9JJA4) WD-repeat protein 12 (YTM1 homolog)|
          Length = 423

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTP 416
           +W    G     + G++ + NCI   P    +AS   D  ++LW P
Sbjct: 282 VWDVESGGLKSTLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDP 326

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>PRP4_ARATH (O22212) U4/U6 small nuclear ribonucleoprotein PRP4-like protein|
          Length = 554

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTPS 413
           IW  RD + ++++ G E  V  ++    +  IA+   D  +KLWT S
Sbjct: 492 IWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSS 538

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>WDR26_MOUSE (Q8C6G8) WD-repeat protein 26|
          Length = 514

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -1

Query: 556 FIWRKRDGNFLRAMEGDECIVNCIEPHPHAMT-IASSGIDNDVKLWTPS 413
           +IW KR    +  + G    VNC+  +P   + +AS+  D  V++W P+
Sbjct: 449 YIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGPA 497

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>WDR26_HUMAN (Q9H7D7) WD-repeat protein 26|
          Length = 514

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -1

Query: 556 FIWRKRDGNFLRAMEGDECIVNCIEPHPHAMT-IASSGIDNDVKLWTPS 413
           +IW KR    +  + G    VNC+  +P   + +AS+  D  V++W P+
Sbjct: 449 YIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGPA 497

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>WDR57_MOUSE (Q6PE01) WD-repeat protein 57|
          Length = 358

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 517 MEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           + G E  V C + HP+  T+AS+G D  + LW
Sbjct: 63  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLW 94

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>TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 100 kDa subunit)
           (TAF(II)100) (TAFII-100) (TAFII100)
          Length = 801

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W       LR   G    VNC   HP++  +A+   D  V+LW
Sbjct: 612 LWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLW 655

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>PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20|
          Length = 606

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W    G+ +   EG +  V  ++ HP    +AS G D+ VK+W
Sbjct: 352 MWHMPGGDLIMCGEGHKDWVAGVDFHPAGTCLASGGGDSAVKIW 395

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>MORG1_BRARE (Q6DH44) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 315

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W    G   R + G    VNC++ +  A  + S  ID  V+ W
Sbjct: 93  LWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCW 136

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>KTNB1_ARATH (Q8H0T9) Katanin p80 WD40-containing subunit B1 homolog 1|
          Length = 837

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W    G  L   +  E  +  ++ HPH   +A+   D  VK W
Sbjct: 169 VWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFW 212

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>WDR57_PONPY (Q5RF51) WD-repeat protein 57|
          Length = 357

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 517 MEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           + G E  V C + HP+  T+AS+G D  + LW
Sbjct: 62  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLW 93

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>WDR57_HUMAN (Q96DI7) WD-repeat protein 57 (Prp8-binding protein) (hPRP8BP) (U5|
           snRNP-specific 40 kDa protein) (38 kDa splicing factor)
          Length = 357

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 517 MEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           + G E  V C + HP+  T+AS+G D  + LW
Sbjct: 62  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLW 93

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>WSB2_MOUSE (O54929) WD repeat and SOCS box-containing protein 2 (WSB-2) (SOCS|
           box-containing WD protein SWiP-2)
          Length = 404

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/63 (22%), Positives = 26/63 (41%)
 Frame = -1

Query: 556 FIWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTPSXXXXXXXXXXXE 377
           F+W  R    +R +EG +  V   +  P +  + ++  D  V +W P            +
Sbjct: 222 FLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGARLRSLHHTQ 281

Query: 376 LKP 368
           L+P
Sbjct: 282 LEP 284

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>PWP2_YEAST (P25635) Periodic tryptophan protein 2 (U3 small nucleolar|
           RNA-associated protein 1) (U3 snoRNA-associated protein
           1)
          Length = 923

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWT 419
           +W  + G  L A+ G E  V+C+        +AS+  D  +++W+
Sbjct: 457 VWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWS 501

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>TAF5_HUMAN (Q15542) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 100 kDa subunit)
           (TAF(II)100) (TAFII-100) (TAFII100)
          Length = 800

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W       LR   G    VNC   HP++  +A+   D  V+LW
Sbjct: 611 LWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLW 654

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>WSB2_HUMAN (Q9NYS7) WD repeat and SOCS box-containing protein 2 (WSB-2) (CS|
           box-containing WD protein)
          Length = 404

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = -1

Query: 556 FIWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTP 416
           F+W  R    +R +EG +  V   +  P +  + ++  D +V +W P
Sbjct: 222 FLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDP 268

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>TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associated|
           factor-associated factor 65 kDa subunit 5L
           (PCAF-associated factor 65 beta) (PAF65-beta)
          Length = 589

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W  + GN +R   G    V  +   P+   +AS+G D  +KLW
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 495



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 526 LRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWT 419
           LR   G    V+C++ HP++  +A+   D  V+LW+
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454

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>HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1|
          Length = 1356

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
            IW    G   + +EG    V+ +   P    +AS  ID  +K+W
Sbjct: 1119 IWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIW 1162



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
            IW    G   + +EG    V  +   P    +AS   DN +K+W
Sbjct: 1203 IWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIW 1246

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>WDR5_MOUSE (P61965) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)|
           (WD-repeat protein BIG-3)
          Length = 334

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -1

Query: 556 FIWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDND--VKLW 422
           +IW  +    ++ ++G   +V     HP    IAS+ ++ND  +KLW
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

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>WDR5_HUMAN (P61964) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)|
          Length = 334

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -1

Query: 556 FIWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDND--VKLW 422
           +IW  +    ++ ++G   +V     HP    IAS+ ++ND  +KLW
Sbjct: 284 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

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>TAF73_SCHPO (O74319) Transcription initiation factor TFIID subunit taf73|
           (Transcription initiation factor TFIID 73 kDa subunit)
           (TAFII-73)
          Length = 642

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W       LR   G +  V+C+  HP+A  +A+   D+  ++W
Sbjct: 471 LWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMW 514

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>MAK11_YEAST (P20484) Protein MAK11 (Maintenance of killer protein 11)|
          Length = 468

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +WR +D   +  ++G    VN ++ HP      S   D+ ++LW
Sbjct: 187 VWRVKDWETVGTLKGHTARVNDVDIHPTNRIAISVSDDHSIRLW 230

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>TAF5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associated|
           factor-associated factor 65 kDa subunit 5L
           (PCAF-associated factor 65 beta) (PAF65-beta)
          Length = 589

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W  + GN +R   G    V  +   P+   +AS+G D  +KLW
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495



 Score = 29.6 bits (65), Expect = 6.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 526 LRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWT 419
           LR   G    V+C++ HP++  +A+   D  V+LW+
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454

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>Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143|
          Length = 1191

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -1

Query: 538 DGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWTP 416
           DGN +R     E     +  HP+   +A +  D  V+LWTP
Sbjct: 714 DGNLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVRLWTP 754



 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 538 DGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           DGN L+ ++G +  V  +   P    +AS+  D  V+LW
Sbjct: 631 DGNLLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLW 669

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>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466|
          Length = 1526

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 553  IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
            +W    GN L  ++G    V  +   P    +AS G D  V+LW
Sbjct: 1058 LWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLW 1101

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>HEX_ADE01 (Q04965) Hexon protein (Late protein 2) (Fragment)|
          Length = 467

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 332 QGKLPELCFPLSGLQLLNINHSCSFNGRGSP 424
           + +LP  CFPL G+ + +       NG G+P
Sbjct: 300 EDELPNYCFPLGGIGVTDTYQGIKSNGNGNP 330

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>WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A|
          Length = 405

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W K     + +       V  ++ HP    IA++G+DN VK+W
Sbjct: 171 LWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214

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>HEX_ADEB3 (P03278) Hexon protein (Late protein 2)|
          Length = 911

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 332 QGKLPELCFPLSGLQLLNINHSCSFN 409
           + ++P  CFPLSG+Q+ N +H    N
Sbjct: 374 EDEMPNYCFPLSGVQIGNRSHEVQRN 399

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>GBLP_DICDI (P46800) Guanine nucleotide-binding protein beta subunit-like|
           protein
          Length = 329

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 526 LRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           L   E  +  V+CI   P+  TI S   DN VK+W
Sbjct: 149 LEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIW 183

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>WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A|
          Length = 407

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 496 VNCIEPHPHAMTIASSGIDNDVKLW 422
           V  ++ HP    IA++G+DN VK+W
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVW 214

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>WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A|
          Length = 407

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 496 VNCIEPHPHAMTIASSGIDNDVKLW 422
           V  ++ HP    IA++G+DN VK+W
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVW 214

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>COPA_YEAST (P53622) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)|
          Length = 1201

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLWT 419
           +W  R G  L   E  E  V  ++ HP      S+G D  +K+W+
Sbjct: 37  LWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWS 81

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>THOC6_RAT (Q6AY87) THO complex subunit 6 homolog (WD-repeat protein 58)|
          Length = 341

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 535 GNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           G F RA+ G    ++C+     +  + S G D  V+LW
Sbjct: 158 GTFTRALRGHTDYIHCLALRERSPEVLSGGEDGAVRLW 195

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>GBB2_CAEEL (Q20636) Guanine nucleotide-binding protein beta subunit 2|
          Length = 356

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W  R G  +++ EG E  +N +  HP+    A+   D   +L+
Sbjct: 226 VWDIRSGQCVQSFEGHEADINTVRFHPNGDAFATGSDDATCRLF 269

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>SEL10_CAEEL (Q93794) F-box/WD-repeat protein sel-10 (Suppressor/enhancer of|
           lin-12) (Sel-10 protein)
          Length = 587

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -1

Query: 553 IWRKRDGNFLRAMEGDECIVNCIEPHPHAMTIASSGIDNDVKLW 422
           +W    G  L  + G    V C++      T+ S G D  VK+W
Sbjct: 362 VWDVESGRHLATLHGHHAAVRCVQ--FDGTTVVSGGYDFTVKIW 403


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,171,868
Number of Sequences: 219361
Number of extensions: 1487811
Number of successful extensions: 3970
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 3696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3967
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result