>gb|BT009310.1| Triticum aestivum clone wlm1.pk0022.d1:fis, full insert mRNA sequence
          Length = 1470

 Score =  385 bits (194), Expect = e-104
 Identities = 347/395 (87%), Gaps = 16/395 (4%)
 Strand = Plus / Minus

                                                                        
Query: 51   tggatcgatcaagagctctaagctactgccatggaaatttggaagcaagcgaagcatcca 110
            |||| ||||||||||||||||||||||  |||||||||||||| |||||| ||||| |||
Sbjct: 1345 tggaccgatcaagagctctaagctactaacatggaaatttggaggcaagcaaagcaacca 1286

                                                                        
Query: 111  tggaggaaaaacgtacgctagctagctaggtcagcgccaagtctatgcaccgcttcttcc 170
            |||||||||||||    |||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 1285 tggaggaaaaacg----ctagctggctaggtcagcgcgaagtctatgcaccgcttcttcc 1230

                                                                        
Query: 171  acaccgcgtgcgccggagtgagcgctacgctggtggcgtccatggatctcttgtttgtct 230
            | ||||||||||||||||||  |||| || |||   ||||||||||||||||| ||||||
Sbjct: 1229 agaccgcgtgcgccggagtggccgctgcgttgg---cgtccatggatctcttgcttgtct 1173

                                                                        
Query: 231  tgg---cggtgccgtagtcgtcgtgctcgggggcgtgcctcggcgccggcgccgtgagaa 287
            |||   |  ||| | |||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1172 tgggcaccatgctgcagtcctcgtgctcgggcgcgtgactcggcgccggcgccgtgagaa 1113

                                                                        
Query: 288  ggtcgacaccgaagagtcgcacggtcctcatcacgggtgccggcgatggggtggagaccg 347
            ||||||| |||||||||||||||||||||||||||||||||||||| |||| ||   |||
Sbjct: 1112 ggtcgacgccgaagagtcgcacggtcctcatcacgggtgccggcgacggggcgg---ccg 1056

                                                                        
Query: 348  tcgcgttgacgaaggtcgtcg---tcgtggtggtcttggaccggagcttgcagtcgatga 404
             |||||||||||| |||||||   |||| |||||||||||||||||||||||||||||||
Sbjct: 1055 ccgcgttgacgaaagtcgtcgtcatcgtcgtggtcttggaccggagcttgcagtcgatga 996

                                               
Query: 405  agagctggctgttgccggaggcggcgcggtagaac 439
            |||||||| || |||| ||||| | ||||||||||
Sbjct: 995  agagctggttgctgcctgaggcagagcggtagaac 961

>ref|XM_475850.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1185

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 268  cggcgccggcgccgtgagaaggtcgacaccgaa 300
            |||||||| ||||||||| ||||||||||||||
Sbjct: 1065 cggcgccgccgccgtgagcaggtcgacaccgaa 1033



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 385 ccggagcttgcagtcgatgaagagctg 411
           ||||| |||||||||||||||||||||
Sbjct: 939 ccggaccttgcagtcgatgaagagctg 913

>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
             complete sequence
          Length = 177861

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 268   cggcgccggcgccgtgagaaggtcgacaccgaa 300
             |||||||| ||||||||| ||||||||||||||
Sbjct: 15121 cggcgccgccgccgtgagcaggtcgacaccgaa 15089



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 385   ccggagcttgcagtcgatgaagagctg 411
             ||||| |||||||||||||||||||||
Sbjct: 14995 ccggaccttgcagtcgatgaagagctg 14969

>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
             complete sequence
          Length = 141715

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 268   cggcgccggcgccgtgagaaggtcgacaccgaa 300
             |||||||| ||||||||| ||||||||||||||
Sbjct: 90306 cggcgccgccgccgtgagcaggtcgacaccgaa 90274



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 385   ccggagcttgcagtcgatgaagagctg 411
             ||||| |||||||||||||||||||||
Sbjct: 90180 ccggaccttgcagtcgatgaagagctg 90154

>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
              complete sequence
          Length = 166218

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 268    cggcgccggcgccgtgagaaggtcgacaccgaa 300
              |||||||| ||||||||| ||||||||||||||
Sbjct: 114809 cggcgccgccgccgtgagcaggtcgacaccgaa 114777



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 385    ccggagcttgcagtcgatgaagagctg 411
              ||||| |||||||||||||||||||||
Sbjct: 114683 ccggaccttgcagtcgatgaagagctg 114657

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 268      cggcgccggcgccgtgagaaggtcgacaccgaa 300
                |||||||| ||||||||| ||||||||||||||
Sbjct: 27083725 cggcgccgccgccgtgagcaggtcgacaccgaa 27083693



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 385      ccggagcttgcagtcgatgaagagctg 411
                ||||| |||||||||||||||||||||
Sbjct: 27083599 ccggaccttgcagtcgatgaagagctg 27083573



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       gaggggggaaacgggggaaa 45
                ||||||||||||||||||||
Sbjct: 25666517 gaggggggaaacgggggaaa 25666498

>ref|NM_192160.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1182

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 268  cggcgccggcgccgtgagaaggtcgacaccgaagag 303
            |||||||||||||||||| ||||| || ||||||||
Sbjct: 1077 cggcgccggcgccgtgagcaggtccacgccgaagag 1042



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 cttgcagtcgatgaagagct 410
           ||||||||||||||||||||
Sbjct: 966 cttgcagtcgatgaagagct 947

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 268      cggcgccggcgccgtgagaaggtcgacaccgaagag 303
                |||||||||||||||||| ||||| || ||||||||
Sbjct: 28613164 cggcgccggcgccgtgagcaggtccacgccgaagag 28613199



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 391      cttgcagtcgatgaagagct 410
                ||||||||||||||||||||
Sbjct: 28613275 cttgcagtcgatgaagagct 28613294

>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034C09
          Length = 170226

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 268    cggcgccggcgccgtgagaaggtcgacaccgaagag 303
              |||||||||||||||||| ||||| || ||||||||
Sbjct: 139603 cggcgccggcgccgtgagcaggtccacgccgaagag 139638



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    cttgcagtcgatgaagagct 410
              ||||||||||||||||||||
Sbjct: 139714 cttgcagtcgatgaagagct 139733

>gb|BT017462.1| Zea mays clone EL01N0407E07.c mRNA sequence
          Length = 1115

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 380 ttggaccggagcttgcagtcgatgaagagct 410
           |||| ||| ||||||||||||||||||||||
Sbjct: 725 ttgggccgcagcttgcagtcgatgaagagct 695

>emb|CR392343.29| Zebrafish DNA sequence from clone CH211-195G6 in linkage group 22,
             complete sequence
          Length = 194465

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 97    aagcgaagcatccatggaggaaa 119
             |||||||||||||||||||||||
Sbjct: 47241 aagcgaagcatccatggaggaaa 47219

>gb|AY528721.1| Triticum aestivum S-like RNase (WRN3) mRNA, partial cds
          Length = 799

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 403 gaagagctggctgttgccgga 423
           |||||||||||||||||||||
Sbjct: 587 gaagagctggctgttgccgga 567

>gb|AC090064.3| Homo sapiens chromosome 5 clone CTB-43C3, complete sequence
          Length = 124882

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    tctaagctactgccatggaaa 87
             |||||||||||||||||||||
Sbjct: 41778 tctaagctactgccatggaaa 41758

>gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complete sequence
          Length = 240957

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    tctaagctactgccatggaaa 87
             |||||||||||||||||||||
Sbjct: 15874 tctaagctactgccatggaaa 15854

>gb|AC107956.8| Homo sapiens chromosome 11, clone RP11-452G18, complete sequence
          Length = 188571

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 87     atttggaagcaagcgaagcatccat 111
              |||||||||||||| ||||||||||
Sbjct: 151406 atttggaagcaagctaagcatccat 151382

>gb|AC003692.1|AC003692 Human Chromosome 11 pac pDJ306b4, complete sequence
          Length = 71664

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 87    atttggaagcaagcgaagcatccat 111
             |||||||||||||| ||||||||||
Sbjct: 52862 atttggaagcaagctaagcatccat 52886

>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 34      aaacgggggaaaatacatgg 53
               ||||||||||||||||||||
Sbjct: 1088799 aaacgggggaaaatacatgg 1088780

>gb|AC159450.1| Trypanosoma brucei chromosome 7 clone RPCI93-5F10, complete sequence
          Length = 154291

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aaacgggggaaaatacatgg 53
             ||||||||||||||||||||
Sbjct: 81691 aaacgggggaaaatacatgg 81710

>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07,
             complete sequence
          Length = 147122

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    gaggggggaaacgggggaaa 45
             ||||||||||||||||||||
Sbjct: 78886 gaggggggaaacgggggaaa 78867

>gb|AC133464.11| Mus musculus chromosome 16, clone RP24-459O21, complete sequence
          Length = 142742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    aggggggaaacgggggaaaa 46
             ||||||||||||||||||||
Sbjct: 18676 aggggggaaacgggggaaaa 18695

>ref|XM_819790.1| Trypanosoma brucei TREU927 clone RPCI93-5F10 kinesin (Tb927.7.4110)
           partial mRNA
          Length = 2685

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 34  aaacgggggaaaatacatgg 53
           ||||||||||||||||||||
Sbjct: 301 aaacgggggaaaatacatgg 282

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 360     aggtcgtcgtcgtggtggtc 379
               ||||||||||||||||||||
Sbjct: 2227262 aggtcgtcgtcgtggtggtc 2227243

>gb|AY341860.1| Oryza sativa (japonica cultivar-group) WRKY20 mRNA, complete cds
          Length = 1630

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 aggtcgtcgtcgtggtggtc 379
           ||||||||||||||||||||
Sbjct: 216 aggtcgtcgtcgtggtggtc 197

>ref|XM_796893.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein kinase
           C, iota type (nPKC-iota) (Atypical protein kinase
           C-lambda/iota) (aPKC-lambda/iota), transcript variant 2
           (LOC581257), mRNA
          Length = 1600

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gcaccgcttcttccacaccg 176
           ||||||||||||||||||||
Sbjct: 492 gcaccgcttcttccacaccg 511

>ref|XM_775182.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein kinase C,
            iota type (nPKC-iota) (Atypical protein kinase
            C-lambda/iota) (aPKC-lambda/iota), transcript variant 1
            (LOC581257), mRNA
          Length = 2131

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  gcaccgcttcttccacaccg 176
            ||||||||||||||||||||
Sbjct: 1023 gcaccgcttcttccacaccg 1042

>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    gtgcctcggcgccggcgccg 281
              ||||||||||||||||||||
Sbjct: 339846 gtgcctcggcgccggcgccg 339827

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 265     cctcggcgccggcgccgtga 284
               ||||||||||||||||||||
Sbjct: 5106373 cctcggcgccggcgccgtga 5106354

>tpg|BK005060.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY
           transcription factor 57 (WRKY57) gene, complete cds
          Length = 3018

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 aggtcgtcgtcgtggtggtc 379
           ||||||||||||||||||||
Sbjct: 167 aggtcgtcgtcgtggtggtc 148

>gb|AC046144.15| Homo sapiens 3 BAC RP11-628J14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188840

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   gtccatggatctcttgtttg 227
             ||||||||||||||||||||
Sbjct: 18966 gtccatggatctcttgtttg 18947

>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin
             biosynthetic gene cluster, complete sequence
          Length = 95700

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 306   gcacggtcctcatcacgggtgccg 329
             ||||||||||||||||||| ||||
Sbjct: 60909 gcacggtcctcatcacgggcgccg 60886

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 262     gtgcctcggcgccggcgccg 281
               ||||||||||||||||||||
Sbjct: 1098829 gtgcctcggcgccggcgccg 1098848

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    aggtcgtcgtcgtggtggtc 379
              ||||||||||||||||||||
Sbjct: 102790 aggtcgtcgtcgtggtggtc 102809

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 363     tcgtcgtcgtggtggtcttg 382
               ||||||||||||||||||||
Sbjct: 7273416 tcgtcgtcgtggtggtcttg 7273435

>dbj|AK061799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H08, full
           insert sequence
          Length = 950

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 aggtcgtcgtcgtggtggtc 379
           ||||||||||||||||||||
Sbjct: 189 aggtcgtcgtcgtggtggtc 170

>emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chromosome 16,
           complete sequence
          Length = 170444

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 27  aggggggaaacgggggaaaa 46
           ||||||||||||||||||||
Sbjct: 766 aggggggaaacgggggaaaa 747

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    aggtcgtcgtcgtggtggtc 379
              ||||||||||||||||||||
Sbjct: 102790 aggtcgtcgtcgtggtggtc 102809

>emb|BX000503.2|CNS08CDT Oryza sativa chromosome 12, . BAC OSJNBb0077A02 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 131346

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    aggtcgtcgtcgtggtggtc 379
              ||||||||||||||||||||
Sbjct: 102790 aggtcgtcgtcgtggtggtc 102809

>emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa0096E03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161808

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   aggtcgtcgtcgtggtggtc 379
             ||||||||||||||||||||
Sbjct: 54399 aggtcgtcgtcgtggtggtc 54418


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,875,471
Number of Sequences: 3902068
Number of extensions: 2875471
Number of successful extensions: 61895
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61134
Number of HSP's gapped (non-prelim): 757
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)