ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart46f01 |
|---|---|
| Clone Library Name | barley_pub |
>ARCA_RHIET (O31017) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine| dihydrolase) (AD) Length = 409 Score = 32.0 bits (71), Expect = 0.36 Identities = 18/65 (27%), Positives = 25/65 (38%) Frame = -1 Query: 234 NRGLRRPPGCWTASRISSLVLDLTCSPLKWNCGRFLSSCVRASNKWAAISAGRQSNYWWT 55 N +R P CW + TC+P+ W R + RA K+ I G WW Sbjct: 153 NTLFQRDPSCWIYGGV-------TCNPMFWPARRAETLIQRAIYKFHPIFLGGDFQIWWG 205 Query: 54 GRARP 40 +P Sbjct: 206 DSDQP 210
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 28.5 bits (62), Expect(2) = 0.51 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 19/77 (24%) Frame = +1 Query: 73 LTPGGDCCPFITRP------------DARRQEPTTIPLQRG-------AGEVKHER*NPR 195 +TP G+CCP ++ ++ EP +P+ G AG + Sbjct: 86 VTPPGECCPVCSQTPGGGNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGE 145 Query: 196 RGPTSRRPPQSPVAGDG 246 RGP R P+ P DG Sbjct: 146 RGPKGRPGPRGPQGIDG 162 Score = 21.6 bits (44), Expect(2) = 0.51 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 5/53 (9%) Frame = +3 Query: 261 PGVSTSSASPRHPLASSAAWYARPFTAR-----KSSPATATIALLHGSAASRG 404 PG + P HP +RPF+A+ + S + + L+ GS G Sbjct: 167 PGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVG 219
>NIMA_EMENI (P11837) G2-specific protein kinase nimA (EC 2.7.11.1) (Never in| mitosis) Length = 699 Score = 30.8 bits (68), Expect = 0.80 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Frame = -1 Query: 330 GGRTMRRCSRAGGAGRPSWWTRR----GRTTCSISCNRGLRRPPGCWTASR 190 GGRT+ ++A GRP +R R+ CS+ R PP W R Sbjct: 630 GGRTLVELAQARAGGRPIDEVKRCASDSRSGCSVPMKSADRDPPAVWDPER 680
>ADA12_MOUSE (Q61824) ADAM 12 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 12) (Meltrin alpha) Length = 903 Score = 30.8 bits (68), Expect = 0.80 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 9/71 (12%) Frame = +2 Query: 146 HFNGEQVRSSTRDEIRDAVQHPGGRLSPRLQEMEHVVLPRRVHQL---------GLPAPP 298 HFN + R S + + D + R P+LQ + V+LP +HQ LPA P Sbjct: 779 HFNTPKDRHSLKCQNMDISRPLDARAVPQLQSPQRVLLP--LHQTPRAPSGPARPLPASP 836 Query: 299 AREQRRMVRPP 331 A Q + +R P Sbjct: 837 AVRQAQGIRKP 847
>SF3A1_ARATH (Q8RXF1) Probable splicing factor 3 subunit 1| Length = 785 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 197 AVQHPGGRLSPRLQEMEHVVLPRRVHQLGLPAPPAREQRRMVRPP 331 + Q+PG +PR + + + HQL +P PP Q M RPP Sbjct: 574 SAQYPG---APRPLGVPMMQPMHQQHQLTMPGPPGHPQMMMNRPP 615
>ARCA1_RHIME (Q92ZT2) Arginine deiminase 1 (EC 3.5.3.6) (ADI 1) (Arginine| dihydrolase 1) (AD 1) Length = 409 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/59 (27%), Positives = 24/59 (40%) Frame = -1 Query: 234 NRGLRRPPGCWTASRISSLVLDLTCSPLKWNCGRFLSSCVRASNKWAAISAGRQSNYWW 58 N +R P CW + + TC+P+ W R + RA K+ G + WW Sbjct: 153 NTLFQRDPSCWIYNGV-------TCNPMFWPARRAETLIQRAVYKFHPSFKGAAFDIWW 204
>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91 antigen) Length = 4544 Score = 29.3 bits (64), Expect = 2.3 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 8/56 (14%) Frame = -1 Query: 282 PSWWTRRGRTTCS-------ISCNRGLRRPPG-CWTASRISSLVLDLTCSPLKWNC 139 P WT G C +C RPPG C T LD C PL+W C Sbjct: 1029 PEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDE--FQCRLDGLCIPLRWRC 1082
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 28.9 bits (63), Expect = 3.0 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = -1 Query: 288 GRPSWWTRRGRTTCSISCNRG--LRRPPGCWTASRISSLVLDL 166 G P W+T RG I RG L PPGC +S I++L +L Sbjct: 210 GNPKWYTDRG-----IPYRRGYLLYGPPGCGKSSFITALAGEL 247
>DZIP3_HUMAN (Q86Y13) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-) (DAZ-interacting| protein 3) (RNA-binding ubiquitin ligase of 138 kDa) (hRUL138) Length = 1208 Score = 28.9 bits (63), Expect = 3.0 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 258 CPGVSTSSASPRHPLASSAAWYARPFTARKSSPATA 365 CPGV +++ PR PL + AW A P + P +A Sbjct: 989 CPGVVSATGQPRAPLMTGIAW-ALPAPVGDAVPPSA 1023
>DP87_DICDI (Q04503) Prespore protein DP87 precursor| Length = 555 Score = 28.9 bits (63), Expect = 3.0 Identities = 23/80 (28%), Positives = 39/80 (48%) Frame = +3 Query: 168 GQAREMKSATRSNIPAAASVPGCRRWNTWSCPGVSTSSASPRHPLASSAAWYARPFTARK 347 G + +A+ ++ AA+S P S S +S+ P ASS+A P +A Sbjct: 471 GSTSDSSAASSADSSAASSSPS-------SSAASSAASSEPSSSAASSSA----PSSASS 519 Query: 348 SSPATATIALLHGSAASRGA 407 S+P++A+ + SA+S A Sbjct: 520 SAPSSASSSAPSSSASSSAA 539
>ENV1_MOUSE (P10404) Retrovirus-related Env polyprotein precursor [Contains:| Coat protein GP70] (Fragment) Length = 313 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 37 YGSSSTSPPIVGLTPGGDCCPFI 105 Y SS+ S I G TPGG C P + Sbjct: 163 YDSSAVSSDIKGATPGGRCNPLV 185
>ENV_MCFF3 (P03388) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP70; Spike protein p15E; R protein] Length = 640 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 37 YGSSSTSPPIVGLTPGGDCCPFI 105 Y SS+ S I G TPGG C P + Sbjct: 163 YDSSAVSSDIKGATPGGRCNPLV 185
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = +3 Query: 210 PAAASVPGCRRWNTWSCPGVSTSSASPRHPLASSAAWYARPFTARKSSPATA 365 P+AA+ CRR S P + S A P A++AA +P +A A A Sbjct: 206 PSAAASSCCRRRRACSSPTTAWSGACGAGPTAATAAQPGKPRSAAAPGRARA 257
>ENV_RSFFV (P03389) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP70; Spike protein p15E] Length = 408 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 37 YGSSSTSPPIVGLTPGGDCCPFI 105 Y SS+ S I G TPGG C P + Sbjct: 163 YDSSAVSSDIKGATPGGRCNPLV 185
>DPOL1_AERPE (O93745) DNA polymerase 1 (EC 2.7.7.7) (DNA polymerase I)| Length = 959 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Frame = +1 Query: 106 TRPDARRQEPTTIPLQRGAGEVKHER*NPR----RGPTSRRPPQSPVAGD 243 T P+ +EP ++ L+R KHE N RG T PQS ++ D Sbjct: 65 TLPETTGKEPASMSLRRNQPSSKHEEYNSESGDVRGLTLEPSPQSELSDD 114
>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL| receptor) (Scavenger receptor class F member 1) Length = 830 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = -1 Query: 312 RCSRAGGAG--RPSWWTRRGRTTCSISCN 232 RC +A GA +P WW RR CS CN Sbjct: 171 RCEQATGACVCKPGWWGRR----CSFRCN 195
>CHEB2_BRAJA (Q89T55) Chemotaxis response regulator protein-glutamate| methylesterase of group 2 operon (EC 3.1.1.61) Length = 397 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +3 Query: 282 ASPRHPLASSAAWYARPFTARKSSPATATIALLHGSAASR 401 ASP AS PF AR ++PA A ALL G+ ++R Sbjct: 159 ASPPLAPASPPPAARAPFVARPAAPAPAANALLPGALSTR 198
>MYOD1_HUMAN (P15172) Myoblast determination protein 1 (Myogenic factor 3)| (Myf-3) Length = 319 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = +2 Query: 182 DEIRDAVQHPGGRLSPRLQEMEHVVLPRRVHQLGLPAPPAREQRRMVRPPLHRQ 343 +++ + H G L P EH P VH PAP ARE + P H Q Sbjct: 44 EDLDPRLMHVGALLKPE----EHSHFPAAVH----PAPGAREDEHVRAPSGHHQ 89
>DXS_WOLSU (Q7M7Z0) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) Length = 619 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 158 EQVRSSTRDEIRDAVQHPGGRLSPRLQEMEHVV 256 E+V S R+ I + V H GG LS L +E +V Sbjct: 12 EEVSLSIRERILEVVSHNGGHLSSTLGAVELIV 44
>RNB_HHV1M (P56958) RNA-binding protein (Vmw21)| Length = 161 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = +1 Query: 43 SSSTSPPIVGLTPGGDCCPFITRPDARRQEPTTIPLQRGAGEVKHER*NPRRGPTSRRPP 222 S + PP + TP P + RP +EP +P V + +PR+ P S R P Sbjct: 76 SEAVRPPTIPRTPRVPREPRVPRPPREPREP-RVPRASRDPRVPRDPRDPRQ-PRSPREP 133 Query: 223 QSP 231 +SP Sbjct: 134 RSP 136
>IF2_CORJK (Q4JV51) Translation initiation factor IF-2| Length = 922 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -1 Query: 333 RGGRTMRRCSRAGGAGRPSWWTRRGR 256 RGGR RR AG GRP R+GR Sbjct: 274 RGGRGGRRGGTAGAFGRPGGAPRKGR 299
>COFG_SYNP6 (Q5N4D1) FO synthase subunit 1 (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1) Length = 336 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%) Frame = +2 Query: 182 DEIRDAVQHPGGRLSPRLQEMEHVV--LPRRV 271 DE+R+A+ G +L PRL H+V LP+R+ Sbjct: 287 DELREALAQQGWQLQPRLPVYPHLVDRLPQRL 318
>ARS_VOLCA (Q10723) Arylsulfatase precursor (EC 3.1.6.1) (AS) (Aryl-sulfate| sulphohydrolase) Length = 649 Score = 28.1 bits (61), Expect = 5.2 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +3 Query: 189 SATRSNIPAAASVPGCRRWNTWSCPGVSTSSASPRHPLASSAAWYARPFTA---RKSSPA 359 +A + AAA PG RR TW+ G S+ + +A+S + PF A R S P Sbjct: 572 AAAAAAAAAAAQQPGRRRMYTWTSAGRQLSATA--SAIATSPQPRSEPFVAEVERHSVPV 629 Query: 360 TATI 371 A + Sbjct: 630 PAEV 633
>RNF38_MOUSE (Q8BI21) RING finger protein 38| Length = 518 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/64 (28%), Positives = 25/64 (39%) Frame = +2 Query: 140 QFHFNGEQVRSSTRDEIRDAVQHPGGRLSPRLQEMEHVVLPRRVHQLGLPAPPAREQRRM 319 Q HF+GE+ + R+ V+ GR RL + H L A E+ R Sbjct: 105 QHHFSGERCNTPARNRRSPPVRRQRGR-RERLSRHNSISQDENYHHLPYAQQQAIEEPRA 163 Query: 320 VRPP 331 PP Sbjct: 164 FHPP 167
>RNF38_HUMAN (Q9H0F5) RING finger protein 38| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/64 (28%), Positives = 25/64 (39%) Frame = +2 Query: 140 QFHFNGEQVRSSTRDEIRDAVQHPGGRLSPRLQEMEHVVLPRRVHQLGLPAPPAREQRRM 319 Q HF+GE+ + R+ V+ GR RL + H L A E+ R Sbjct: 102 QHHFSGERCNTPARNRRSPPVRRQRGR-RDRLSRHNSISQDENYHHLPYAQQQAIEEPRA 160 Query: 320 VRPP 331 PP Sbjct: 161 FHPP 164
>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) Length = 4543 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 8/56 (14%) Frame = -1 Query: 282 PSWWTRRGRTTCS-------ISCNRGLRRPPG-CWTASRISSLVLDLTCSPLKWNC 139 P WT G C +C RPPG C T LD C P++W C Sbjct: 1027 PVHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDE--FQCRLDGLCIPMRWRC 1080
>ATS19_HUMAN (Q8TE59) ADAMTS-19 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 19) (ADAM-TS 19) (ADAM-TS19) Length = 1207 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +3 Query: 204 NIPAAASVPGCRRWNTWSCPGVSTSSASPRHPL 302 N P A +PG R W C S ++SP+H L Sbjct: 682 NPPCPAGLPGFR---DWQCQAYSVRTSSPKHIL 711
>GAL83_YEAST (Q04739) Glucose repression protein GAL83 (SPM1 protein)| Length = 417 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = -3 Query: 301 SGWRGEAELVDTPGQDHVFHL---LQPGTEAAAGMLD---RVADFISRA 173 +GWR LV PGQ + H+ L PGT ++D R +D++ A Sbjct: 182 TGWRKMIGLVPVPGQPGLMHVKLQLPPGTHRFRFIVDNELRFSDYLPTA 230
>LIN13_CAEEL (Q11107) Zinc finger protein lin-13 (Abnormal cell lineage protein| 13) Length = 2248 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/47 (25%), Positives = 23/47 (48%) Frame = -3 Query: 343 LAVKGRAYHAALLASGWRGEAELVDTPGQDHVFHLLQPGTEAAAGML 203 +++ G +H L +G + E + + HVFH+L + + G L Sbjct: 2128 MSMHGNTFHCNLCTTGTKTVEEFAEHCRKAHVFHILVKSSHSTRGEL 2174
>ANP_NOTCO (P24856) Ice-structuring glycoprotein precursor (ISGP) (Antifreeze| glycopeptide polyprotein) (AFGP polyprotein) [Contains: AFGP7 (AFGP 7); AFGP8 (AFGP 8); AFGP8-like] (Fragment) Length = 790 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 213 AAASVPGCRRWNTWSCPGVSTSSASPRHPLASSAAWYARPFTARKSSPATATIALLHGSA 392 A A+ P N + ++A+P A++AA A P TA + ATA A +A Sbjct: 673 ATAATPATAALNFAATAATPATAATPALIFAATAATAATPATAAFNFAATAATAATPATA 732 Query: 393 AS 398 A+ Sbjct: 733 AT 734 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = +3 Query: 213 AAASVPGCRRWNTWSCPGVSTSSASPRHPLASSAAWYARP------FTARKSSPAT-ATI 371 A A+ P +N + ++A+P A++AA A P F A ++PAT AT Sbjct: 384 ATAATPATPAFNFAATAATPATAATPALIFAATAATAATPATAALNFAATAATPATAATP 443 Query: 372 ALLHGSAASRGA 407 AL+ + A+ A Sbjct: 444 ALIFAATAATAA 455 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +3 Query: 213 AAASVPGCRRWNTWSCPGVSTSSASPRHPLASSAAWYARPFTARKSSPATATIALLHGSA 392 A A+ P N + ++A+P A++AA A P TA + ATA A +A Sbjct: 180 ATAATPATAALNFAATAATPATAATPALIFAATAATAATPATAALNFAATAATAATPATA 239 Query: 393 A 395 A Sbjct: 240 A 240 Score = 27.7 bits (60), Expect = 6.8 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%) Frame = +3 Query: 213 AAASVPGCRRWNTWSCPGVSTSSASPRHPLASSAAWYARP------FTARKSSPAT-ATI 371 A A+ P N + + A+P A++AA A P F A ++PAT AT Sbjct: 10 ATAATPATAALNFAATAATPATPATPALIFAATAATAATPATAALNFAATAATPATAATP 69 Query: 372 ALLHGSAASRGA 407 AL+ +AA+ A Sbjct: 70 ALIFAAAAATAA 81 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +3 Query: 213 AAASVPGCRRWNTWSCPGVSTSSASPRHPLASSAAWYARPFTARKSSPATATIALLHGSA 392 A A+ P N + ++A+P A++AA A P TA + ATA A +A Sbjct: 469 ATAATPATAALNFAATAATPATAATPALIFAATAATAATPATAAFNFAATAATAATPATA 528 Query: 393 A 395 A Sbjct: 529 A 529
>V33P_ADE40 (P11805) 33 kDa phosphoprotein| Length = 211 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = +3 Query: 210 PAAASVPGCRRWNTWSCPGVSTSSASPRHPLASS--AAWYARPFTARKSSPAT 362 P S+ RRW+T S G T+ A+P L + + R+ SPAT Sbjct: 90 PQPCSLKASRRWDTVSIAGSPTAPAAPTKRLEKTPRVRKTSSAIATRQDSPAT 142
>RNB_HHV11 (P04487) RNA-binding protein (Vmw21)| Length = 161 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = +1 Query: 43 SSSTSPPIVGLTPGGDCCPFITRPDARRQEPTTIPLQRGAGEVKHER*NPRRGPTSRRPP 222 S + PP + TP P + RP +EP +P V + +PR+ P S R P Sbjct: 76 SEAVRPPTIPRTPRVPREPRVPRPPREPREP-RVPRAPRDPRVPRDPRDPRQ-PRSPREP 133 Query: 223 QSP 231 +SP Sbjct: 134 RSP 136
>RSPO3_MOUSE (Q2TJ95) R-spondin-3 precursor (Roof plate-specific spondin-3)| (Cysteine-rich and single thrombospondin domain-containing protein 1) (Cristin-1) (Nucleopondin) (Cabriolet) Length = 277 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Frame = +2 Query: 167 RSSTRDEIRDAVQHPG--GRLSPRLQEMEHVVLPRRVHQLGLPAPPAREQRR 316 + T +RD +QHP G L P E ++ R+ G RE++R Sbjct: 169 KRGTETRVRDILQHPSAKGNLCPPTSETRTCIVQRKKCSKGERGKKGRERKR 220
>PUR92_YEAST (P38009) Bifunctional purine biosynthesis protein ADE17 [Includes:| Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP synthetase) (ATIC)] Length = 592 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/39 (28%), Positives = 19/39 (48%) Frame = -1 Query: 330 GGRTMRRCSRAGGAGRPSWWTRRGRTTCSISCNRGLRRP 214 G ++ C+R G +WW R+ I +G++RP Sbjct: 446 GQQSRIHCTRLAGDKADNWWFRQHPRVLEIKWAKGVKRP 484
>VE2_HPV30 (P36790) Regulatory protein E2| Length = 378 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/73 (30%), Positives = 32/73 (43%) Frame = +3 Query: 183 MKSATRSNIPAAASVPGCRRWNTWSCPGVSTSSASPRHPLASSAAWYARPFTARKSSPAT 362 + S RSN+ +V +NT+ P +TS+ + ASSA RP T S T Sbjct: 199 VSSTLRSNVSPVETVVEYNTYNTYQTP--TTSTPVGANEAASSARPGKRPRTTEPDSTDT 256 Query: 363 ATIALLHGSAASR 401 + S A+R Sbjct: 257 TRQSAARESHANR 269
>GLNE_BIFLO (Q8G654) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 1076 Score = 27.7 bits (60), Expect = 6.8 Identities = 9/29 (31%), Positives = 15/29 (51%) Frame = -1 Query: 117 VRASNKWAAISAGRQSNYWWTGRARPVDL 31 ++ W +A R +Y W+GRA D+ Sbjct: 957 IQLRKAWTLCTAARNGSYLWSGRANQADI 985
>NUDT8_HUMAN (Q8WV74) Nucleoside diphosphate-linked moiety X motif 8,| mitochondrial precursor (EC 3.6.1.-) (Nudix motif 8) Length = 236 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +2 Query: 200 VQHPGGRLSPRLQEMEHVVLPRRVHQLGLPAP 295 V PGG+ P Q++ H L +LGL P Sbjct: 64 VSFPGGKCDPADQDVVHTALRETREELGLAVP 95
>YR51_CAEEL (Q09321) Hypothetical protein F42A8.1| Length = 370 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 3/50 (6%) Frame = -1 Query: 333 RGGRTMRRCSRAGGAGRPSWWTRRGRTTCS---ISCNRGLRRPPGCWTAS 193 +G RC +G WW + T C RG P GC +++ Sbjct: 26 KGAAARARCWTSGNGRPAQWWQEGDQVTRGKYFYECRRGQLEPLGCLSST 75
>TILS_METCA (Q607F5) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 439 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = +2 Query: 230 RLQEMEHVVLPRR-VHQLGLPAPPAREQRRMVRPPLHRQEVVARHG 364 RLQ E +L RR +H+ GL APPA+ R+ R+EVV G Sbjct: 253 RLQPDEQRLLLRRWIHKRGLRAPPAKLLERI------RKEVVETAG 292
>GUN4_BACS5 (P28622) Endoglucanase 4 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase 4) (Cellulase 4) (EG-IV) Length = 636 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/40 (27%), Positives = 17/40 (42%) Frame = -1 Query: 177 VLDLTCSPLKWNCGRFLSSCVRASNKWAAISAGRQSNYWW 58 +LD +KW FL + + WA + G + WW Sbjct: 113 LLDDMLDQIKWATDYFLKAHTGPNEFWAQVGDGNADHGWW 152
>CI094_HUMAN (Q496M8) Protein C9orf94 precursor| Length = 467 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = -1 Query: 276 WWTRRGRTTCSISC-NRGLRRP 214 WW+ TCS SC NRG+++P Sbjct: 195 WWSVDRLATCSASCGNRGVQQP 216
>PA2B_BUNFA (P00629) Phospholipase A2 isozyme VB-2 (EC 3.1.1.4) (Toxin V-3)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -1 Query: 171 DLTCSPLKWNCGRFLSSCVRAS 106 D+TC+ K +CGR + C RA+ Sbjct: 74 DITCTDAKGSCGRTVCDCDRAA 95
>PA2A_BUNFA (P00628) Phospholipase A2 isozyme VA (EC 3.1.1.4) (Toxin V-2)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -1 Query: 171 DLTCSPLKWNCGRFLSSCVRAS 106 D+TC+ K +CGR + C RA+ Sbjct: 74 DITCTDAKGSCGRTVCDCDRAA 95
>ENC_DROME (Q8MSX1) Protein encore| Length = 1818 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/56 (28%), Positives = 22/56 (39%) Frame = +3 Query: 231 GCRRWNTWSCPGVSTSSASPRHPLASSAAWYARPFTARKSSPATATIALLHGSAAS 398 G +N P + HP A SA A P + + A T+ L HG A+ Sbjct: 1242 GSIHYNPSYTPSSVAHAGGAHHPSAGSAQIIAAPAASTTTYHALPTLTLAHGGPAT 1297
>PER3_MOUSE (O70361) Period circadian protein 3 (mPER3)| Length = 1113 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Frame = +1 Query: 28 RQIYGSSSTSPPIVGLTPGGDCCPFIT--RPDARRQEPTTIPLQRGAG 165 RQ + P+ +PG CP +T PD + P+ P GAG Sbjct: 726 RQKHKRKKLPAPVDTSSPGAHLCPHVTGLLPDEQHWGPSASPSPLGAG 773
>HEM32_STRAW (Q82P95) Porphobilinogen deaminase 2 (EC 2.5.1.61) (PBG 2)| (Hydroxymethylbilane synthase 2) (HMBS 2) (Pre-uroporphyrinogen synthase 2) Length = 314 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +2 Query: 179 RDEIRDAVQHPGGRLSPRLQEMEHVVLP--RRVHQLGLPAP 295 RD+IRDA+ HPGG L + RRV QL P Sbjct: 106 RDDIRDALVHPGGLTLDELPPGTRIGTSSVRRVAQLAAAYP 146
>MEI3_SCHPO (P08090) 21 kDa protein inducing meiosis and sporulation| Length = 148 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = +3 Query: 270 STSSASPRHPLASSAAWYARPFTARKS-SPATAT 368 S ++++ RHP +S++A R TAR+S SP T+T Sbjct: 3 SQNTSNSRHPASSASALPNRTNTARRSTSPRTST 36 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,442,692 Number of Sequences: 219361 Number of extensions: 1177271 Number of successful extensions: 4515 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 4273 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4509 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
