Clone Name | rbart46e03 |
---|---|
Clone Library Name | barley_pub |
>gb|AF220602.1| Lycopersicon pimpinellifolium Rio Grande 76R Pto locus, complete sequence Length = 60831 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 gtacaaaattatatccaacaa 184 ||||||||||||||||||||| Sbjct: 46338 gtacaaaattatatccaacaa 46318
>gb|U23440.1|TTU23440 Tetrahymena thermophila RP internal deletion sequence Length = 2779 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 aaaattatatccaacaaactg 188 ||||||||||||||||||||| Sbjct: 26 aaaattatatccaacaaactg 6
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 tacaaaattatatccaacaaa 185 ||||||||||||||||||||| Sbjct: 24977122 tacaaaattatatccaacaaa 24977142 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 gcagccgcgccgacaccggcg 266 ||||||||||||||||||||| Sbjct: 4690553 gcagccgcgccgacaccggcg 4690533
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 aaagttaaccaacaaccaaac 43 ||||||||||||||||||||| Sbjct: 749186 aaagttaaccaacaaccaaac 749166
>dbj|AP004733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0023I22 Length = 170029 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 tacaaaattatatccaacaaa 185 ||||||||||||||||||||| Sbjct: 29455 tacaaaattatatccaacaaa 29475
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0530H05 Length = 145952 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 tacaaaattatatccaacaaa 185 ||||||||||||||||||||| Sbjct: 71677 tacaaaattatatccaacaaa 71697
>dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1212_B09 Length = 130728 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 aaagttaaccaacaaccaaac 43 ||||||||||||||||||||| Sbjct: 26386 aaagttaaccaacaaccaaac 26366
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 gcagccgcgccgacaccggcg 266 ||||||||||||||||||||| Sbjct: 53152 gcagccgcgccgacaccggcg 53132
>dbj|AK070038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035D03, full insert sequence Length = 1277 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 gcagccgcgccgacaccggcg 266 ||||||||||||||||||||| Sbjct: 900 gcagccgcgccgacaccggcg 880
>gb|AY853716.1| Uncultured bacteriophage clone 76, genomic sequence Length = 2604 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 ccttgcagccgcgccgacac 261 |||||||||||||||||||| Sbjct: 1669 ccttgcagccgcgccgacac 1650
>ref|XM_420409.1| PREDICTED: Gallus gallus similar to SET domain-containing protein 7; histone H3-lysine 4-specific methyltransferase; H3-K4-HMTase; histone H3-K4 methyltransferase (LOC422443), mRNA Length = 1281 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 tatatccaacaaactgcatgtcgg 196 ||||||||||||||| |||||||| Sbjct: 464 tatatccaacaaactccatgtcgg 441
>gb|AC137981.2| Mus musculus BAC clone RP24-156N24 from chromosome 10, complete sequence Length = 151463 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 aaaattatatccaacaaact 187 |||||||||||||||||||| Sbjct: 31887 aaaattatatccaacaaact 31906
>gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, complete sequence Length = 170056 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tcgattcaaagttaaccaac 35 |||||||||||||||||||| Sbjct: 82267 tcgattcaaagttaaccaac 82248
>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence Length = 245623 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 aaaattatatccaacaaact 187 |||||||||||||||||||| Sbjct: 31229 aaaattatatccaacaaact 31210
>emb|AJ850280.1| Vicia sativa partial LINE retrotransposon, clone TvsL29 Length = 543 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gtacaaaattatatccaaca 183 |||||||||||||||||||| Sbjct: 186 gtacaaaattatatccaaca 205
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 caacaaactgcatgtcggtc 198 |||||||||||||||||||| Sbjct: 3421667 caacaaactgcatgtcggtc 3421686
>gb|AC100795.2| Homo sapiens chromosome 18, clone RP11-956K8, complete sequence Length = 193569 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ctaaacccccacccccaaac 242 |||||||||||||||||||| Sbjct: 71655 ctaaacccccacccccaaac 71674
>emb|CR523863.1| Gallus gallus finished cDNA, clone ChEST230n19 Length = 1353 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 tatatccaacaaactgcatgtcgg 196 ||||||||||||||| |||||||| Sbjct: 468 tatatccaacaaactccatgtcgg 445
>gb|AF234581.1|AF234581 Acanthobrahmaea europaea dopa decarboxylase mRNA, partial cds Length = 709 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcaaagttaaccaacaacca 40 |||||||||||||||||||| Sbjct: 612 tcaaagttaaccaacaacca 593
>gb|AC046202.5| Homo sapiens chromosome 18, clone RP11-318I15, complete sequence Length = 179210 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ctaaacccccacccccaaac 242 |||||||||||||||||||| Sbjct: 162364 ctaaacccccacccccaaac 162383
>gb|AC007223.5| Homo sapiens chromosome 16 clone RP11-468I15, complete sequence Length = 159520 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cccccacccccaaaccttgc 247 |||||||||||||||||||| Sbjct: 97360 cccccacccccaaaccttgc 97341
>gb|AC119900.7| Mus musculus chromosome 8, clone RP24-235K6, complete sequence Length = 174540 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ctaaacccccacccccaaac 242 |||||||||||||||||||| Sbjct: 97718 ctaaacccccacccccaaac 97699
>emb|AL935289.4| Zebrafish DNA sequence from clone CH211-232C12, complete sequence Length = 154174 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 aaacccccacccccaaacct 244 |||||||||||||||||||| Sbjct: 85141 aaacccccacccccaaacct 85122 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,953,453 Number of Sequences: 3902068 Number of extensions: 2953453 Number of successful extensions: 59438 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59324 Number of HSP's gapped (non-prelim): 114 length of query: 283 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 261 effective length of database: 17,147,199,772 effective search space: 4475419140492 effective search space used: 4475419140492 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)