Clone Name | rbart46e01 |
---|---|
Clone Library Name | barley_pub |
>LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A chain)| Length = 3075 Score = 30.4 bits (67), Expect = 1.8 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -1 Query: 150 VAHTNCRVCQCFVQGNHHSSAFELIHACEC 61 V NCR C+C V+G+H + C+C Sbjct: 894 VTAKNCRACECHVKGSHSAVCHLETGLCDC 923
>DEOC_PHOLL (Q7N932) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 259 Score = 30.4 bits (67), Expect = 1.8 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -2 Query: 359 ACSVSLGESDTLIARIDRRSTVVSALLGKNACSVTVNAGIDY 234 AC V+ E+D L+ I + A L + A +++NAG D+ Sbjct: 124 ACKVACAEADVLLKVIIETGELKEASLIRKASEISINAGADF 165
>FZD5_XENLA (P58421) Frizzled 5 precursor (Frizzled-5) (Fz-5) (Xfz5)| Length = 559 Score = 30.4 bits (67), Expect = 1.8 Identities = 12/37 (32%), Positives = 18/37 (48%) Frame = -1 Query: 129 VCQCFVQGNHHSSAFELIHACECDDVKQRF*SDSGMF 19 V C++ H+ +E H C C KQR+ D +F Sbjct: 449 VVACYIYEQHYREHWEKTHNCSCPGDKQRYRPDYAVF 485
>CDK10_HUMAN (Q15131) Cell division protein kinase 10 (EC 2.7.11.22)| (Serine/threonine-protein kinase PISSLRE) Length = 360 Score = 29.6 bits (65), Expect = 3.1 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -1 Query: 198 DALPMTHHSSLLLLPRVAHTNCRVCQCFVQGNHHSSAFELIHACECD 58 D +P++ + LL R+ H N + V GNH S F ++ CE D Sbjct: 77 DGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQD 123
>LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A chain)| Length = 3084 Score = 29.3 bits (64), Expect = 4.0 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = -1 Query: 156 PRVAHTNCRVCQCFVQGNHHSSAFELIHACEC 61 PR A +C+ C C QG+ HS C C Sbjct: 1506 PRAAGGSCQTCDCNPQGSVHSDCDRASGQCVC 1537
>V2A_CMVMB (Q66145) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)| Length = 857 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -1 Query: 171 SLLLLPRVAHTNCRVCQCFVQGNHHSSAFELIHACECDDVK 49 +LLL PR +H + + V + S F CE DDV+ Sbjct: 129 ALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYSEECEADDVQ 169
>V2A_CMVB (Q66136) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)| Length = 857 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -1 Query: 171 SLLLLPRVAHTNCRVCQCFVQGNHHSSAFELIHACECDDVK 49 +LLL PR +H + + V + S F CE DDV+ Sbjct: 129 ALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYSEECEADDVQ 169
>HIS82_METCA (Q608S3) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 371 Score = 28.5 bits (62), Expect = 6.9 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%) Frame = -2 Query: 380 TGSYHDGACSVSLGES-DTLIARIDRRSTVVSALLGKNACSVTVNAGIDYAFIVAL---- 216 T HDG+ G +T++ R+D + VV N + G Y+F+ AL Sbjct: 135 TAPAHDGSRGPRFGHDLETMLERVDPDTRVVFIANPNNPTGTLLGRGELYSFLAALPEHV 194 Query: 215 AVVLDEMHYQ 186 V+DE +++ Sbjct: 195 IAVVDEAYFE 204
>V2A_CMVII (Q83262) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)| Length = 857 Score = 28.1 bits (61), Expect = 9.0 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = -1 Query: 171 SLLLLPRVAHTNCRVCQCFVQGNHHSSAFELIHACECDDVK 49 +LLL PR +H + + V + S F CE DD++ Sbjct: 129 ALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYSEECEADDIQ 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,387,006 Number of Sequences: 219361 Number of extensions: 737251 Number of successful extensions: 1979 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1934 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1979 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)