Clone Name | rbart46d11 |
---|---|
Clone Library Name | barley_pub |
>FABI_BRANA (P80030) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast| precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) Length = 385 Score = 48.1 bits (113), Expect = 5e-06 Identities = 21/30 (70%), Positives = 26/30 (86%) Frame = -1 Query: 381 ASAITGSTVYVDNGLNTMGLAVDSPTVSSL 292 ASAITG+T+YVDNGLN+MG+A+DSP L Sbjct: 354 ASAITGATIYVDNGLNSMGVALDSPVFKDL 383
>FABI1_RHIME (P58380) Enoyl-[acyl-carrier-protein] reductase [NADH] 1 (EC| 1.3.1.9) (NADH-dependent enoyl-ACP reductase 1) Length = 272 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Frame = -1 Query: 381 ASAITGSTVYVDNGLNTMGL-AVDSPTVSSL 292 +S +TG +VD+G +T+G+ AVD+P +S L Sbjct: 240 SSGVTGEVHHVDSGYHTVGMKAVDAPDISVL 270
>PYRH_CHLTR (O84685) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = +1 Query: 40 LLRRQSATLNTVSATTTSEIATLQMGQRGGAGLLKRSISTAIPSFFSCPQL 192 L + QS +N VSA +ATL G L + + S SCPQL Sbjct: 62 LSQSQSLQINRVSADQMGMLATLINGMALADALKTEDVPNLLTSTLSCPQL 112
>DRL42_ARATH (Q9FKZ1) Probable disease resistance protein At5g66900| Length = 809 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -2 Query: 170 EGMAVEIDLLSSPAPPLWPICNVAISDVVVADTVFSVADWRLNKL 36 +G++ +DLLS PAP +C+V D V+ DW L +L Sbjct: 139 DGLSKRMDLLSVPAPVFRDLCSVPKLDKVIVG-----LDWPLGEL 178
>PYRH_CHLMU (P71147) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 40 LLRRQSATLNTVSATTTSEIATLQMGQRGGAGLLKRSISTAIPSFFSCPQL 192 L + Q+ +N VSA +ATL G L + + S SCPQL Sbjct: 62 LSQSQNLQINRVSADQMGMLATLINGMALADALKTEDVPNLLTSTLSCPQL 112
>Y2081_MYCTU (Q10689) Hypothetical protein Rv2081c/MT2143| Length = 146 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 6/35 (17%) Frame = +1 Query: 49 RQSATLNTVSATTTSEIATL------QMGQRGGAG 135 R SAT+ + +TT+ IATL Q+ +RGGAG Sbjct: 56 RVSATIKAAAPSTTAAIATLATAANGQLRERGGAG 90
>FABI_AQUAE (O67505) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 270 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -1 Query: 381 ASAITGSTVYVDNGLNTMGL 322 A AITG V+VDNG + MG+ Sbjct: 237 ARAITGEVVHVDNGYHIMGV 256
>PYRH_CHLPN (Q9Z7K7) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 248 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/51 (33%), Positives = 22/51 (43%) Frame = +1 Query: 40 LLRRQSATLNTVSATTTSEIATLQMGQRGGAGLLKRSISTAIPSFFSCPQL 192 L ++ +N VSA +ATL G L I + S SCPQL Sbjct: 60 LAEQKELQINRVSADQMGMLATLINGMAVADALKAEDIPCLLTSTLSCPQL 110
>LYAM3_SHEEP (P98109) P-selectin precursor (Granule membrane protein 140)| (GMP-140) (PADGEM) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (CD62P antigen) Length = 769 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -2 Query: 323 LQLTAPRYLRCCDSGRWTYFPDSPRLDCV 237 L+L ++ C SGRWT P S ++D V Sbjct: 544 LKLEGSNHVECTASGRWTAPPPSCKVDTV 572
>NSPS_VIBCH (Q9KU25) Norspermidine sensor precursor (Norspermidine-binding| protein) Length = 359 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 82 TTTSEIATLQMGQRGGAGLLKRSISTAIPSFF 177 T SE+ + RG G+LK S+ T +P+ + Sbjct: 149 TQWSEVVDIAPAHRGRVGMLKDSVETLLPALY 180
>CYAA_PODAN (Q01513) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)| (Adenylyl cyclase) Length = 2145 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +2 Query: 275 TYQNHNNEDTVGLSTARPMVLSPLST*TVEP 367 T+ H E L RP +LSP S +VEP Sbjct: 1999 THSKHEKEQAQDLREIRPAILSPGSELSVEP 2029
>K0056_HUMAN (P42695) Protein KIAA0056| Length = 1498 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 274 HLPESQQRRYRGAVNCKTHGVKSIVDVNSRASD 372 HLP+S + + AV CK +G + ++V S A D Sbjct: 768 HLPKSTRDKVTDAVKCKLNGFQWSLEVISSAVD 800 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,822,580 Number of Sequences: 219361 Number of extensions: 822356 Number of successful extensions: 1870 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1847 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1869 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)