ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart46d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105767.1| Zea mays PCO096351 mRNA sequence 64 3e-07
2gb|AY596567.1| Saccharum officinarum clone SCJFLR1035G04, comple... 56 8e-05
3gb|BC083038.1| Xenopus laevis hypothetical LOC494856, mRNA (cDNA... 42 1.2
4ref|NM_126080.1| Arabidopsis thaliana unknown protein AT5G66815 ... 40 4.8
5ref|XM_362557.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 4.8
6ref|XM_958884.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.8
7gb|AC099174.7| Rattus norvegicus 4 BAC CH230-98I1 (Children's Ho... 40 4.8
8ref|XM_331838.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.8
9ref|XM_976614.1| PREDICTED: Mus musculus chromodomain helicase D... 40 4.8
10ref|XM_976650.1| PREDICTED: Mus musculus chromodomain helicase D... 40 4.8
11ref|XM_976731.1| PREDICTED: Mus musculus chromodomain helicase D... 40 4.8
12ref|XM_976687.1| PREDICTED: Mus musculus chromodomain helicase D... 40 4.8
13ref|XM_977271.1| PREDICTED: Mus musculus chromodomain helicase D... 40 4.8
14ref|XM_897304.2| PREDICTED: Mus musculus chromodomain helicase D... 40 4.8
15ref|XM_977193.1| PREDICTED: Mus musculus chromodomain helicase D... 40 4.8
16ref|XM_977233.1| PREDICTED: Mus musculus chromodomain helicase D... 40 4.8
17ref|XM_977302.1| PREDICTED: Mus musculus chromodomain helicase D... 40 4.8
18ref|XM_503816.1| Yarrowia lipolytica CLIB122, YALI0E11363g predi... 40 4.8
19ref|XM_965921.1| PREDICTED: Tribolium castaneum similar to CG321... 40 4.8
20gb|AC154883.13| Mus musculus chromosome 7, clone RP23-8I8, compl... 40 4.8
21emb|X03811.1|DSHSP82 Drosophila simulans gene fragment for heat ... 40 4.8
22emb|X03810.1|DMHSP82 Drosophila melanogaster gene for heat shock... 40 4.8
23emb|X00065.1|DMHS83 Drosophila melanogaster 5'end of heat shock ... 40 4.8
24emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 4.8
25gb|AC132058.5| Rattus norvegicus 18 BAC CH230-229M9 (Children's ... 40 4.8
26emb|AL132979.2|ATT3A5 Arabidopsis thaliana DNA chromosome 3, BAC... 40 4.8
27dbj|AB110192.1| Oryza sativa (japonica cultivar-group) mRNA for ... 40 4.8
28gb|AY122080.1| Drosophila melanogaster AT20544 full insert cDNA 40 4.8
29gb|AC097725.2| Drosophila melanogaster 3L BAC RP98-48E19 (Roswel... 40 4.8
30dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 40 4.8
31gb|AC007048.5| Arabidopsis thaliana chromosome 2 clone F23N11 ma... 40 4.8
32gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map ... 40 4.8
33gb|AC006260.4| Arabidopsis thaliana chromosome 2 clone T2N18 map... 40 4.8
34dbj|AB206577.1| Arabidopsis thaliana PCLL gene for putative tran... 40 4.8
35ref|NM_079175.2| Drosophila melanogaster Heat shock protein 83 C... 40 4.8
36gb|AC099754.2| Homo sapiens chromosome 3 clone RP11-592A5, compl... 40 4.8
37gb|BC029703.1| Mus musculus chromodomain helicase DNA binding pr... 40 4.8
38dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
39gb|AY085340.1| Arabidopsis thaliana clone 14679 mRNA, complete s... 40 4.8
40gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 40 4.8
41gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15 40 4.8
42dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
43dbj|AP000420.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 4.8
44dbj|AB025604.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 4.8
45dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 4.8
46dbj|AK106053.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
47dbj|AK071776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
48dbj|AK068966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
49emb|BX294130.5| Zebrafish DNA sequence from clone DKEY-263O22 in... 40 4.8
50gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11... 40 4.8
51emb|CR847128.1| Takifugu rubripes DNA, highly conserved vertebra... 40 4.8
52emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 4.8
53gb|U57473.1|DMU57473 Drosophila melanogaster heat shock protein ... 40 4.8
54gb|U57472.1|DMU57472 Drosophila melanogaster heat shock protein ... 40 4.8
55gb|U57471.1|DMU57471 Drosophila melanogaster heat shock protein ... 40 4.8
56gb|U57470.1|DMU57470 Drosophila melanogaster heat shock protein ... 40 4.8
57gb|U57469.1|DMU57469 Drosophila melanogaster heat shock protein ... 40 4.8
58gb|U57468.1|DMU57468 Drosophila melanogaster heat shock protein ... 40 4.8
59gb|U57467.1|DMU57467 Drosophila melanogaster heat shock protein ... 40 4.8
60gb|U57466.1|DMU57466 Drosophila melanogaster heat shock protein ... 40 4.8
61gb|U57465.1|DMU57465 Drosophila melanogaster heat shock protein ... 40 4.8
62gb|U57464.1|DMU57464 Drosophila melanogaster heat shock protein ... 40 4.8
63gb|U57463.1|DMU57463 Drosophila melanogaster heat shock protein ... 40 4.8
64gb|U57462.1|DMU57462 Drosophila melanogaster heat shock protein ... 40 4.8
65gb|U57461.1|DMU57461 Drosophila melanogaster heat shock protein ... 40 4.8
66gb|U57460.1|DMU57460 Drosophila melanogaster heat shock protein ... 40 4.8
67gb|U57459.1|DMU57459 Drosophila melanogaster heat shock protein ... 40 4.8 
>gb|AY105767.1| Zea mays PCO096351 mRNA sequence
          Length = 1391

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 248 cttcttctcatcatcagagtcgtcatcctgcttcttgcggccatagttcccc 299
           ||||||||||||||| ||||||||||| |  |||||||||||||||| ||||
Sbjct: 646 cttcttctcatcatccgagtcgtcatcatctttcttgcggccatagtacccc 595



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 314 accgtatgaaccctgggtctcctctccatagggcttgggcttctggta 361
           ||||||||||||||| ||||||||  ||||||| || |||||| ||||
Sbjct: 529 accgtatgaaccctgtgtctcctcgtcatagggttttggcttccggta 482
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>gb|AY596567.1| Saccharum officinarum clone SCJFLR1035G04, complete sequence
          Length = 1677

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 248 cttcttctcatcatcagagtcgtcatcctgcttcttgcggccatagttcccc 299
           ||||||||||||||| ||||| ||||| |  |||||||||||||||| ||||
Sbjct: 440 cttcttctcatcatccgagtcatcatcatctttcttgcggccatagtacccc 491



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 318 tatgaaccctgggtctcctctccatagggcttgggcttctggta 361
           ||||||||||| |||||||| ||||| || || |||||| ||||
Sbjct: 525 tatgaaccctgtgtctcctcgccatacggttttggcttccggta 568
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>gb|BC083038.1| Xenopus laevis hypothetical LOC494856, mRNA (cDNA clone MGC:98809
           IMAGE:3399968), complete cds
          Length = 2169

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 248 cttcttctcatcatcagagtc 268
           |||||||||||||||||||||
Sbjct: 339 cttcttctcatcatcagagtc 319
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>ref|NM_126080.1| Arabidopsis thaliana unknown protein AT5G66815 mRNA, complete cds
          Length = 501

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 167 attgtgacggcggtgggggtggtg 190
           |||||||||||||||| |||||||
Sbjct: 341 attgtgacggcggtggtggtggtg 318
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>ref|XM_362557.1| Magnaporthe grisea 70-15 hypothetical protein (MG08140.4) partial
            mRNA
          Length = 2655

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 253  tctcatcatcagagtcgtcatcct 276
            ||||||||||||||||||| ||||
Sbjct: 1951 tctcatcatcagagtcgtcgtcct 1928
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>ref|XM_958884.1| Neurospora crassa OR74A hypothetical protein (NCU02640.1) partial
           mRNA
          Length = 372

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 191 cttctcgtaacgttccttct 210
           ||||||||||||||||||||
Sbjct: 294 cttctcgtaacgttccttct 275
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>gb|AC099174.7| Rattus norvegicus 4 BAC CH230-98I1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 197530

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    cggcggtgggggtggtgctt 193
              ||||||||||||||||||||
Sbjct: 190829 cggcggtgggggtggtgctt 190810
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>ref|XM_331838.1| Neurospora crassa OR74A hypothetical protein (NCU02640.1) partial
           mRNA
          Length = 372

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 191 cttctcgtaacgttccttct 210
           ||||||||||||||||||||
Sbjct: 294 cttctcgtaacgttccttct 275
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>ref|XM_976614.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 2,
            transcript variant 2 (Chd2), mRNA
          Length = 5848

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttcttctcatcatcagagtcgtc 271
            |||||| |||||||||||||||||
Sbjct: 3938 cttcttgtcatcatcagagtcgtc 3915
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>ref|XM_976650.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 2,
            transcript variant 3 (Chd2), mRNA
          Length = 5845

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttcttctcatcatcagagtcgtc 271
            |||||| |||||||||||||||||
Sbjct: 3938 cttcttgtcatcatcagagtcgtc 3915
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>ref|XM_976731.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 2,
            transcript variant 5 (Chd2), mRNA
          Length = 6199

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttcttctcatcatcagagtcgtc 271
            |||||| |||||||||||||||||
Sbjct: 3995 cttcttgtcatcatcagagtcgtc 3972
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>ref|XM_976687.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 2,
            transcript variant 4 (Chd2), mRNA
          Length = 6123

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttcttctcatcatcagagtcgtc 271
            |||||| |||||||||||||||||
Sbjct: 3919 cttcttgtcatcatcagagtcgtc 3896
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>ref|XM_977271.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 2,
            transcript variant 4 (Chd2), mRNA
          Length = 6123

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttcttctcatcatcagagtcgtc 271
            |||||| |||||||||||||||||
Sbjct: 3919 cttcttgtcatcatcagagtcgtc 3896
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>ref|XM_897304.2| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 2,
            transcript variant 3 (Chd2), mRNA
          Length = 5794

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttcttctcatcatcagagtcgtc 271
            |||||| |||||||||||||||||
Sbjct: 3590 cttcttgtcatcatcagagtcgtc 3567
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>ref|XM_977193.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 2,
            transcript variant 2 (Chd2), mRNA
          Length = 5848

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttcttctcatcatcagagtcgtc 271
            |||||| |||||||||||||||||
Sbjct: 3938 cttcttgtcatcatcagagtcgtc 3915
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>ref|XM_977233.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 2,
            transcript variant 3 (Chd2), mRNA
          Length = 5845

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttcttctcatcatcagagtcgtc 271
            |||||| |||||||||||||||||
Sbjct: 3938 cttcttgtcatcatcagagtcgtc 3915
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>ref|XM_977302.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 2,
            transcript variant 5 (Chd2), mRNA
          Length = 6199

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttcttctcatcatcagagtcgtc 271
            |||||| |||||||||||||||||
Sbjct: 3995 cttcttgtcatcatcagagtcgtc 3972
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>ref|XM_503816.1| Yarrowia lipolytica CLIB122, YALI0E11363g predicted mRNA
          Length = 1125

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 255 tcatcatcagagtcgtcatc 274
           ||||||||||||||||||||
Sbjct: 983 tcatcatcagagtcgtcatc 964
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>ref|XM_965921.1| PREDICTED: Tribolium castaneum similar to CG32156-PC, isoform C
            (LOC659634), mRNA
          Length = 2544

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  gttcttcttctcatcatcag 264
            ||||||||||||||||||||
Sbjct: 1104 gttcttcttctcatcatcag 1085
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>gb|AC154883.13| Mus musculus chromosome 7, clone RP23-8I8, complete sequence
          Length = 213537

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 248    cttcttctcatcatcagagtcgtc 271
              |||||| |||||||||||||||||
Sbjct: 163057 cttcttgtcatcatcagagtcgtc 163080
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>emb|X03811.1|DSHSP82 Drosophila simulans gene fragment for heat shock protein hsp 82
          Length = 3072

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 203  ttccttcttctcatcatcaaactcatcg 230
            |||||||||||||||||||  |||||||
Sbjct: 2634 ttccttcttctcatcatcagcctcatcg 2607
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>emb|X03810.1|DMHSP82 Drosophila melanogaster gene for heat shock protein hsp 82
          Length = 5024

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 203  ttccttcttctcatcatcaaactcatcg 230
            |||||||||||||||||||  |||||||
Sbjct: 2841 ttccttcttctcatcatcagcctcatcg 2814
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>emb|X00065.1|DMHS83 Drosophila melanogaster 5'end of heat shock gene hsp83
          Length = 3292

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 203  ttccttcttctcatcatcaaactcatcg 230
            |||||||||||||||||||  |||||||
Sbjct: 2854 ttccttcttctcatcatcagcctcatcg 2827
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>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
              hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    tcatcatcagagtcgtcatc 274
              ||||||||||||||||||||
Sbjct: 689220 tcatcatcagagtcgtcatc 689201
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>gb|AC132058.5| Rattus norvegicus 18 BAC CH230-229M9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 228492

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    gggagacaagaccatcttta 97
             ||||||||||||||||||||
Sbjct: 97450 gggagacaagaccatcttta 97469
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>emb|AL132979.2|ATT3A5 Arabidopsis thaliana DNA chromosome 3, BAC clone T3A5
          Length = 84196

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   gttcttcttctcatcatcag 264
             ||||||||||||||||||||
Sbjct: 56222 gttcttcttctcatcatcag 56203
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>dbj|AB110192.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein,
            complete cds, clone: 21C4BG001
          Length = 1460

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 174  cggcggtgggggtggtgcttctcgtaacgttccttcttctcatcatca 221
            ||||| ||| ||||||||||||  ||||| | |||||| |||||||||
Sbjct: 1177 cggcgatggtggtggtgcttctgataacgctgcttcttttcatcatca 1130
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>gb|AY122080.1| Drosophila melanogaster AT20544 full insert cDNA
          Length = 2932

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 203  ttccttcttctcatcatcaaactcatcg 230
            |||||||||||||||||||  |||||||
Sbjct: 1028 ttccttcttctcatcatcagcctcatcg 1001
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>gb|AC097725.2| Drosophila melanogaster 3L BAC RP98-48E19 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 176521

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 203    ttccttcttctcatcatcaaactcatcg 230
              |||||||||||||||||||  |||||||
Sbjct: 138184 ttccttcttctcatcatcagcctcatcg 138157
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>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    ctgcttcttgcggccatagt 294
              ||||||||||||||||||||
Sbjct: 210636 ctgcttcttgcggccatagt 210617
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>gb|AC007048.5| Arabidopsis thaliana chromosome 2 clone F23N11 map mi148, complete
             sequence
          Length = 61384

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   gttcttcttctcatcatcag 264
             ||||||||||||||||||||
Sbjct: 21341 gttcttcttctcatcatcag 21322
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>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete sequence
          Length = 134151

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    gttcttcttctcatcatcag 264
              ||||||||||||||||||||
Sbjct: 128924 gttcttcttctcatcatcag 128905
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>gb|AC006260.4| Arabidopsis thaliana chromosome 2 clone T2N18 map ve018, complete
             sequence
          Length = 80736

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   gttcttcttctcatcatcag 264
             ||||||||||||||||||||
Sbjct: 71214 gttcttcttctcatcatcag 71233
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>dbj|AB206577.1| Arabidopsis thaliana PCLL gene for putative transcription factor,
            complete cds
          Length = 4554

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  gttcttcttctcatcatcag 264
            ||||||||||||||||||||
Sbjct: 1296 gttcttcttctcatcatcag 1277
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>ref|NM_079175.2| Drosophila melanogaster Heat shock protein 83 CG1242-RA (Hsp83), mRNA
          Length = 2904

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 203  ttccttcttctcatcatcaaactcatcg 230
            |||||||||||||||||||  |||||||
Sbjct: 1028 ttccttcttctcatcatcagcctcatcg 1001
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>gb|AC099754.2| Homo sapiens chromosome 3 clone RP11-592A5, complete sequence
          Length = 197310

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 320    tgaaccctgggtctcctctccata 343
              |||| |||||||||||||||||||
Sbjct: 121135 tgaatcctgggtctcctctccata 121158
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>gb|BC029703.1| Mus musculus chromodomain helicase DNA binding protein 2, mRNA (cDNA
            clone IMAGE:5356213), partial cds
          Length = 3218

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttcttctcatcatcagagtcgtc 271
            |||||| |||||||||||||||||
Sbjct: 2378 cttcttgtcatcatcagagtcgtc 2355
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                               
Query: 174     cggcggtgggggtggtgcttctcgtaacgttccttcttctcatcatca 221
               ||||| ||| ||||||||||||  ||||| | |||||| |||||||||
Sbjct: 6827529 cggcgatggtggtggtgcttctgataacgctgcttcttttcatcatca 6827576
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>gb|AY085340.1| Arabidopsis thaliana clone 14679 mRNA, complete sequence
          Length = 498

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 167 attgtgacggcggtgggggtggtg 190
           |||||||||||||||| |||||||
Sbjct: 338 attgtgacggcggtggtggtggtg 315
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>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
          Length = 96102

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 gttcttcttctcatcatcag 264
           ||||||||||||||||||||
Sbjct: 143 gttcttcttctcatcatcag 162
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>gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15
          Length = 89490

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   gttcttcttctcatcatcag 264
             ||||||||||||||||||||
Sbjct: 89433 gttcttcttctcatcatcag 89452
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>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0479H10
          Length = 139874

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 174   cggcggtgggggtggtgcttctcgtaacgttccttcttctcatcatca 221
             ||||| ||| ||||||||||||  ||||| | |||||| |||||||||
Sbjct: 17054 cggcgatggtggtggtgcttctgataacgctgcttcttttcatcatca 17101
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>dbj|AP000420.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MZN14
          Length = 82890

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   gttcttcttctcatcatcag 264
             ||||||||||||||||||||
Sbjct: 53996 gttcttcttctcatcatcag 54015
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>dbj|AB025604.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15
          Length = 75125

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   gttcttcttctcatcatcag 264
             ||||||||||||||||||||
Sbjct: 66485 gttcttcttctcatcatcag 66466
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>dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUD21
          Length = 69850

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 167   attgtgacggcggtgggggtggtg 190
             |||||||||||||||| |||||||
Sbjct: 20183 attgtgacggcggtggtggtggtg 20160
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>dbj|AK106053.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F05, full
            insert sequence
          Length = 1493

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 174  cggcggtgggggtggtgcttctcgtaacgttccttcttctcatcatca 221
            ||||| ||| ||||||||||||  ||||| | |||||| |||||||||
Sbjct: 1186 cggcgatggtggtggtgcttctgataacgctgcttcttttcatcatca 1139
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>dbj|AK071776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110G05, full
            insert sequence
          Length = 1643

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 174  cggcggtgggggtggtgcttctcgtaacgttccttcttctcatcatca 221
            ||||| ||| ||||||||||||  ||||| | |||||| |||||||||
Sbjct: 1337 cggcgatggtggtggtgcttctgataacgctgcttcttttcatcatca 1290
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>dbj|AK068966.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170C17, full
            insert sequence
          Length = 2406

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 174  cggcggtgggggtggtgcttctcgtaacgttccttcttctcatcatca 221
            ||||| ||| ||||||||||||  ||||| | |||||| |||||||||
Sbjct: 2100 cggcgatggtggtggtgcttctgataacgctgcttcttttcatcatca 2053
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>emb|BX294130.5| Zebrafish DNA sequence from clone DKEY-263O22 in linkage group 19,
              complete sequence
          Length = 205973

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 164    gtaattgtgacggcggtgggggtg 187
              ||||||||||||| ||||||||||
Sbjct: 183196 gtaattgtgacgggggtgggggtg 183219
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>gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11 of 83 of the complete
              sequence
          Length = 297894

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 203    ttccttcttctcatcatcaaactcatcg 230
              |||||||||||||||||||  |||||||
Sbjct: 124306 ttccttcttctcatcatcagcctcatcg 124279
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>emb|CR847128.1| Takifugu rubripes DNA, highly conserved vertebrate non-coding
           sequence, element ID CNE1024
          Length = 216

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  cagcaccaacaagggagaca 85
           ||||||||||||||||||||
Sbjct: 138 cagcaccaacaagggagaca 119
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 255     tcatcatcagagtcgtcatc 274
               ||||||||||||||||||||
Sbjct: 1389892 tcatcatcagagtcgtcatc 1389873
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>gb|U57473.1|DMU57473 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1382

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57472.1|DMU57472 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1382

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57471.1|DMU57471 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1382

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57470.1|DMU57470 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1382

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57469.1|DMU57469 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1382

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57468.1|DMU57468 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1382

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57467.1|DMU57467 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1382

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57466.1|DMU57466 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1385

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57465.1|DMU57465 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1385

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57464.1|DMU57464 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1385

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57463.1|DMU57463 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1385

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57462.1|DMU57462 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1385

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57461.1|DMU57461 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1385

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57460.1|DMU57460 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1385

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932
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>gb|U57459.1|DMU57459 Drosophila melanogaster heat shock protein 83 (Hsp83) gene, partial
           cds
          Length = 1385

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 203 ttccttcttctcatcatcaaactcatcg 230
           |||||||||||||||||||  |||||||
Sbjct: 959 ttccttcttctcatcatcagcctcatcg 932


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,890,561
Number of Sequences: 3902068
Number of extensions: 2890561
Number of successful extensions: 57794
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57601
Number of HSP's gapped (non-prelim): 193
length of query: 364
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 342
effective length of database: 17,147,199,772
effective search space: 5864342322024
effective search space used: 5864342322024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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