Clone Name | rbart46d09 |
---|---|
Clone Library Name | barley_pub |
>gb|U01963.1|HVU01963 Hordeum vulgare CM 72 germin subunit mRNA, complete cds Length = 1006 Score = 848 bits (428), Expect = 0.0 Identities = 428/428 (100%) Strand = Plus / Minus Query: 52 tgcaaaatgcaaactatattttttgacaaagatggcaataaaaggtagtacattcaattc 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 tgcaaaatgcaaactatattttttgacaaagatggcaataaaaggtagtacattcaattc 939 Query: 112 ctcgtattggttctgaagattaaaccatgaggctaacttattcaatttattacaactgca 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 ctcgtattggttctgaagattaaaccatgaggctaacttattcaatttattacaactgca 879 Query: 172 tgcgagattaaccggaagcttgaatacatgtcttctgctgagaatcattaaattttgcta 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 878 tgcgagattaaccggaagcttgaatacatgtcttctgctgagaatcattaaattttgcta 819 Query: 232 ccatgcatatacagaattatgcattgattatttaaggaaggctcccaggaattaaaaccc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 ccatgcatatacagaattatgcattgattatttaaggaaggctcccaggaattaaaaccc 759 Query: 292 agcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgccttggt 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 agcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgccttggt 699 Query: 352 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 639 Query: 412 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 579 Query: 472 ctggaagt 479 |||||||| Sbjct: 578 ctggaagt 571
>gb|M21962.1|WHTGAMINA Triticum aestivum germin protein precursor, mRNA, complete cds Length = 1012 Score = 434 bits (219), Expect = e-118 Identities = 366/411 (89%), Gaps = 8/411 (1%) Strand = Plus / Minus Query: 77 acaaagatggcaataaaaggtagtacattcaattcctcgtattggttctga----agatt 132 ||||||| | |||||||| ||||||||||||||||||| |||||||||||| || | Sbjct: 974 acaaagacgacaataaaaagtagtacattcaattcctcatattggttctgatcgaaggct 915 Query: 133 aaaccatgaggctaacttattcaat-ttattaca--actgcatgcgagattaaccggaag 189 | |||||||||||||||| |||||| |||||||| ||| ||||||||||||||| ||| Sbjct: 914 acaccatgaggctaacttgttcaatcttattacacgactacatgcgagattaacctgaaa 855 Query: 190 cttgaatacatgtcttctgctgagaatcattaaattttgctaccatgcatatacagaatt 249 ||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||| Sbjct: 854 cttgaatacatgtcttctggtgagaattattaaattttgctagcatgcatatatggaatt 795 Query: 250 atgcattgattattt-aaggaaggctcccaggaattaaaacccagcggcgaacttggact 308 || | | || |||| | |||||||||| || ||||||||||||||||| |||||||||| Sbjct: 794 atataattatcatttcagggaaggctcctagaaattaaaacccagcggcaaacttggact 735 Query: 309 tgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggcgtcggga 368 |||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 734 tgagaagttccacgaccctggcctccacccggagtgccttggtgagcaccggcgttggga 675 Query: 369 taggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttttggctgt 428 | |||||||| ||||||||||||||||| ||||| ||||| ||||| ||||| ||||||| Sbjct: 674 tgggcgggttggagccgaagagcgtgaggggcacgaagacaatgccggggttctggctgt 615 Query: 429 tgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagt 479 ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 614 tgaaggagacgaccatggaggcctcggtcttaccgacgttgaactggaagt 564
>gb|M63223.1|WHTGERMIN Wheat germin 9f-2.8 gene, complete cds Length = 2822 Score = 434 bits (219), Expect = e-118 Identities = 366/411 (89%), Gaps = 8/411 (1%) Strand = Plus / Minus Query: 77 acaaagatggcaataaaaggtagtacattcaattcctcgtattggttctga----agatt 132 ||||||| | |||||||| ||||||||||||||||||| |||||||||||| || | Sbjct: 2687 acaaagacgacaataaaaagtagtacattcaattcctcatattggttctgatcgaaggct 2628 Query: 133 aaaccatgaggctaacttattcaat-ttattaca--actgcatgcgagattaaccggaag 189 | |||||||||||||||| |||||| |||||||| ||| ||||||||||||||| ||| Sbjct: 2627 acaccatgaggctaacttgttcaatcttattacacgactacatgcgagattaacctgaaa 2568 Query: 190 cttgaatacatgtcttctgctgagaatcattaaattttgctaccatgcatatacagaatt 249 ||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||| Sbjct: 2567 cttgaatacatgtcttctggtgagaattattaaattttgctagcatgcatatatggaatt 2508 Query: 250 atgcattgattattt-aaggaaggctcccaggaattaaaacccagcggcgaacttggact 308 || | | || |||| | |||||||||| || ||||||||||||||||| |||||||||| Sbjct: 2507 atataattatcatttcagggaaggctcctagaaattaaaacccagcggcaaacttggact 2448 Query: 309 tgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggcgtcggga 368 |||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 2447 tgagaagttccacgaccctggcctccacccggagtgccttggtgagcaccggcgttggga 2388 Query: 369 taggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttttggctgt 428 | |||||||| ||||||||||||||||| ||||| ||||| ||||| ||||| ||||||| Sbjct: 2387 tgggcgggttggagccgaagagcgtgaggggcacgaagacaatgccggggttctggctgt 2328 Query: 429 tgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagt 479 ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2327 tgaaggagacgaccatggaggcctcggtcttaccgacgttgaactggaagt 2277 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 acgtaaactttggaacatgtttgacttacaaatggtaattggacaaatata 51 ||||||||| | |||||||||||||||| ||| |||||| ||||||||||| Sbjct: 2775 acgtaaactatagaacatgtttgacttataaaaggtaatcggacaaatata 2725
>gb|M63224.1|WHTGERMINA Wheat germin 9f-3.8 gene, complete cds Length = 3761 Score = 371 bits (187), Expect = 1e-99 Identities = 347/395 (87%), Gaps = 4/395 (1%) Strand = Plus / Minus Query: 88 aataaaaggtagtacatt-caattcctcgtattggttctgaagattaaaccatgaggcta 146 ||||||| | |||||||| |||||| |||||||||||| |||| | ||| |||| || Sbjct: 2189 aataaaaagcagtacatttcaattcatcgtattggttccgaaggctgaactgcgaggtta 2130 Query: 147 acttattcaat-ttattacaactgcatgcgagattaaccggaagcttgaatacatgtctt 205 ||||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 2129 acttattcaatcttattacaactgcatg-gagcttaaccagaagcttgaatacatgtctt 2071 Query: 206 ctgctgagaatcattaaattttgctaccatgcatatacagaattatgcattgattattta 265 ||| |||||||||||| |||||||| |||||||||| ||||||| |||||| |||| Sbjct: 2070 ctgtggagaatcattaatttttgctagcatgcatatatcgaattatatattgatcatttc 2011 Query: 266 aggaa-ggctcccaggaattaaaacccagcggcgaacttggacttgagaagttccacgac 324 ||| |||||||||||||||| ||||| | ||||||||||| ||||||||||||||||| Sbjct: 2010 agggctggctcccaggaattaagacccaccagcgaacttggatttgagaagttccacgac 1951 Query: 325 ccctgcctccacccggagcgccttggtgagcaccggcgtcgggataggcgggtttgagcc 384 ||| |||||||||||||| ||||||||||||||||| | ||||| |||||||| ||||| Sbjct: 1950 cccagcctccacccggagagccttggtgagcaccggtttggggatgggcgggttggagcc 1891 Query: 385 gaagagcgtgagcggcacaaagacgatgccagggttttggctgttgaaggagacgaccat 444 |||||||||||| ||||| ||||||| || ||| | |||||||||||| |||||||||| Sbjct: 1890 gaagagcgtgagtggcacgaagacgacgctggggctctggctgttgaagaagacgaccat 1831 Query: 445 ggaggcctccgtcttaccgacgttgaactggaagt 479 ||||||||||||||||||||||||||||||||||| Sbjct: 1830 ggaggcctccgtcttaccgacgttgaactggaagt 1796
>emb|Y09917.1|TAPSBGER3 T.aestivum mRNA for germin-like protein 3 Length = 1027 Score = 289 bits (146), Expect = 4e-75 Identities = 281/322 (87%), Gaps = 8/322 (2%) Strand = Plus / Minus Query: 162 tacaactgcatgcgagattaaccggaagcttgaatacatgtcttctgctgagaatcatta 221 |||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 855 tacaactgcatg-gagcttaaccagaagcttgaatacatgtcttctgcagagaatcatta 797 Query: 222 aattttgctaccatgcatatacagaattatgcattgattatttaaggaa-ggctcccagg 280 ||||| || | |||||||||| ||||||| |||||| |||| ||| |||||||||| Sbjct: 796 aatttcgccagcatgcatatatcgaattatatattgatcatttcagggctggctcccagg 737 Query: 281 aattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccgg 340 |||||| ||||| | ||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 736 aattaagacccaccagcgaagttggatttgagaagttccacgaccccagcctccacccgg 677 Query: 341 agcgccttggtgagcaccggcgtcgggataggcgggtttgagcc---gaagagcgtgagc 397 || ||||||||||||||||| || ||||| |||||||| || || ||||||||||| Sbjct: 676 agagccttggtgagcaccggtgtggggatgggcgggttggatccgaagaagagcgtga-- 619 Query: 398 ggcacaaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtc 457 |||| |||||||| || ||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 618 -gcacgaagacgattccggggttctggctgttgaaggagacgaccatggaggcatgtgtc 560 Query: 458 ttaccgacgttgaactggaagt 479 |||||||||||||||||||||| Sbjct: 559 ttaccgacgttgaactggaagt 538
>emb|Y09916.1|TAPSBGER2 T.aestivum mRNA for germin-like protein 2, partial Length = 764 Score = 283 bits (143), Expect = 3e-73 Identities = 185/199 (92%) Strand = Plus / Minus Query: 281 aattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccgg 340 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 508 aattaaaacccagcggcgaacttggacttgagtagttccacgaccccggcctccacccgg 449 Query: 341 agcgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggc 400 ||||||||||||||||||||||| ||||| || || || |||||||||||| |||| ||| Sbjct: 448 agcgccttggtgagcaccggcgttgggatgggtggattggagccgaagagcatgagtggc 389 Query: 401 acaaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtctta 460 || ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 388 acgaagacgatgccggggttctggctgttgaaggagacgaccatggaggcctcggtctta 329 Query: 461 ccgacgttgaactggaagt 479 || |||||||||||||||| Sbjct: 328 ccaacgttgaactggaagt 310 Score = 137 bits (69), Expect = 4e-29 Identities = 147/169 (86%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 77 acaaagatggcaataaaaggtagtacattcaattcctcgtattggttctgaagattaaac 136 ||||||| | |||||||| | ||||||| ||||||| | |||||| ||||||| | ||| Sbjct: 701 acaaagacgacaataaaaagaagtacatacaattccccatattggatctgaaggcttaac 642 Query: 137 catgaggctaacttattcaat-ttattacaactgcatgcgagattaaccggaagcttgaa 195 |||| |||||||||||||||| ||||||||| ||||||||||||||||| | ||||||| Sbjct: 641 catggggctaacttattcaatcttattacaattgcatgcgagattaacccggagcttgag 582 Query: 196 tacatgtcttctgctg-agaatcattaaa-ttttgctaccatgcatata 242 |||||||||| ||||| ||||| |||||| |||||||| |||||||||| Sbjct: 581 tacatgtcttttgctgaagaattattaaatttttgctagcatgcatata 533
>emb|Y14203.1|HVY14203 Hordeum vulgare mRNA for oxalate oxidase (HvOxOa) Length = 970 Score = 248 bits (125), Expect = 1e-62 Identities = 179/197 (90%) Strand = Plus / Minus Query: 283 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggag 342 |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 767 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 708 Query: 343 cgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcac 402 ||||||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| Sbjct: 707 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 648 Query: 403 aaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttacc 462 ||||||||||||||||| |||||||||||||| || |||||| |||| ||||||||||| Sbjct: 647 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 588 Query: 463 gacgttgaactggaagt 479 |||||||||||||||| Sbjct: 587 aacgttgaactggaagt 571
>gb|L15737.1|BLYGERMIN Barley germin mRNA, partial cds Length = 603 Score = 238 bits (120), Expect = 1e-59 Identities = 174/192 (90%) Strand = Plus / Minus Query: 288 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 347 ||||| ||||||||||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 601 acccaccggcgaacttggacttgagaagttccacgactccggcctccacccggagagcct 542 Query: 348 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 407 |||||||||| ||||| ||||| || |||| ||||||||||| ||||||||||| |||| Sbjct: 541 tggtgagcacgggcgtggggatgggagggtcggagccgaagagtgtgagcggcacgaaga 482 Query: 408 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 467 ||||||||||||| |||||||||||||| || |||||| |||| ||||||||||| |||| Sbjct: 481 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 422 Query: 468 tgaactggaagt 479 |||||||||||| Sbjct: 421 tgaactggaagt 410
>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene) Length = 828 Score = 230 bits (116), Expect = 3e-57 Identities = 176/196 (89%) Strand = Plus / Minus Query: 284 taaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagc 343 |||||||| ||||| ||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 671 taaaaccctgcggcaaacttggacttgagaagttccacgaccccagcatccacacggagc 612 Query: 344 gccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcaca 403 |||||||||||||||||||||||||| || ||||| || ||||||| ||||| |||||| Sbjct: 611 gccttggtgagcaccggcgtcgggatcggtgggttggaaccgaagactgtgagtggcaca 552 Query: 404 aagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccg 463 ||||||||||| ||||| |||||||||||||| || |||||||| ||||||||||| || Sbjct: 551 aagacgatgcctgggttctggctgttgaaggacacaaccatggatgcctccgtcttgcca 492 Query: 464 acgttgaactggaagt 479 ||||||||||| |||| Sbjct: 491 acgttgaactgaaagt 476
>emb|Y09918.1|TAPSBGER4 T.aestivum mRNA for germin-like protein 4, partial Length = 572 Score = 222 bits (112), Expect = 8e-55 Identities = 184/208 (88%) Strand = Plus / Minus Query: 272 gctcccaggaattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcc 331 ||||||||| ||||| ||||| | ||||||||||||||||||||||| |||||||| ||| Sbjct: 332 gctcccagggattaagacccaccagcgaacttggacttgagaagttcgacgaccccggcc 273 Query: 332 tccacccggagcgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagc 391 ||||||| || |||||||||||||||||||| ||||| |||||||| || ||||||||| Sbjct: 272 tccacccttagtgccttggtgagcaccggcgtggggattggcgggttggaaccgaagagc 213 Query: 392 gtgagcggcacaaagacgatgccagggttttggctgttgaaggagacgaccatggaggcc 451 |||||||||| || |||||||| ||||| || ||||||||||| || |||||| ||||| Sbjct: 212 atgagcggcacgaaaacgatgccggggttctgtctgttgaaggaaacaaccatgtaggcc 153 Query: 452 tccgtcttaccgacgttgaactggaagt 479 || |||||||| |||||||||||||||| Sbjct: 152 tctgtcttaccaacgttgaactggaagt 125 Score = 113 bits (57), Expect = 5e-22 Identities = 94/105 (89%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 109 ttcctcgtattggttctgaagattaaaccatgaggctaacttattcaat-ttattacaac 167 ||||||||||||| ||||||| |||||| |||||||||||||||||| |||||||||| Sbjct: 498 ttcctcgtattggctctgaaggctaaaccgcgaggctaacttattcaatcttattacaac 439 Query: 168 tgcatgcgagattaaccggaagcttgaatacatgtcttctgctga 212 |||||||||| ||| | ||||||||||||| ||||||||||||| Sbjct: 438 tgcatgcgagcttagctagaagcttgaatacgtgtcttctgctga 394
>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene) Length = 867 Score = 222 bits (112), Expect = 8e-55 Identities = 175/196 (89%) Strand = Plus / Minus Query: 284 taaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagc 343 |||||||| ||||| ||||||||||||||||||||||||||||| || ||| | |||||| Sbjct: 671 taaaaccctgcggcaaacttggacttgagaagttccacgaccccagcatccgcacggagc 612 Query: 344 gccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcaca 403 |||||||||||||||||||||||||| || ||||| || ||||||| ||||| |||||| Sbjct: 611 gccttggtgagcaccggcgtcgggatcggtgggttggaaccgaagactgtgagtggcaca 552 Query: 404 aagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccg 463 ||||||||||| ||||| |||||||||||||| || |||||||| ||||||||||| || Sbjct: 551 aagacgatgcctgggttctggctgttgaaggacacaaccatggatgcctccgtcttgcca 492 Query: 464 acgttgaactggaagt 479 ||||||||||| |||| Sbjct: 491 acgttgaactgaaagt 476
>emb|AJ556991.1|TAE556991 Triticum aestivum mRNA for oxalate oxidase precursor (OXO1 gene) Length = 675 Score = 208 bits (105), Expect = 1e-50 Identities = 174/197 (88%) Strand = Plus / Minus Query: 283 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggag 342 ||||||||||||||| ||||||||||| |||||||| |||||||| |||||||||| || Sbjct: 675 ttaaaacccagcggcaaacttggacttcagaagttcgacgaccccggcctccacccttag 616 Query: 343 cgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcac 402 |||||||||||||||||||||||||| || ||||| |||| |||||| || | ||||| Sbjct: 615 agccttggtgagcaccggcgtcgggatgggtgggttggagctgaagagtgtcaatggcac 556 Query: 403 aaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttacc 462 |||||||| || ||||| ||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 555 gaagacgataccggggttctggctgttgaaggagactaccatggatgcctcggtcttacc 496 Query: 463 gacgttgaactggaagt 479 |||||||||||| |||| Sbjct: 495 gacgttgaactgcaagt 479
>emb|AJ504848.1|LPE504848 Lolium perenne mRNA for oxalate oxidase (oxo3 gene) Length = 868 Score = 196 bits (99), Expect = 5e-47 Identities = 174/199 (87%) Strand = Plus / Minus Query: 281 aattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccgg 340 ||||| ||||| || || ||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 674 aattagaaccctgcagcaaacttggacttgagaagttccacgaccccagcgtccacacgg 615 Query: 341 agcgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggc 400 || |||||||||||||| ||||| ||||| ||||| || || ||||||| |||||| ||| Sbjct: 614 agtgccttggtgagcacgggcgtagggatcggcggattggaaccgaagaccgtgagaggc 555 Query: 401 acaaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtctta 460 || ||||||||||| ||||| ||||| |||||||| || |||||||| ||||||||||| Sbjct: 554 acgaagacgatgcctgggttctggctattgaaggacacaaccatggatgcctccgtcttg 495 Query: 461 ccgacgttgaactggaagt 479 || |||||||||||||||| Sbjct: 494 ccaacgttgaactggaagt 476
>ref|XM_469349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 190 bits (96), Expect = 3e-45 Identities = 168/192 (87%) Strand = Plus / Minus Query: 288 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 347 ||||| ||| |||||||||||| || || || ||||| || || |||||||||||||||| Sbjct: 679 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 620 Query: 348 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 407 || |||||||||||||||||| || ||||| |||||||| | |||||||| || |||| Sbjct: 619 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 560 Query: 408 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 467 ||||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||| Sbjct: 559 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 500 Query: 468 tgaactggaagt 479 |||||||||||| Sbjct: 499 tgaactggaagt 488
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 190 bits (96), Expect = 3e-45 Identities = 168/192 (87%) Strand = Plus / Plus Query: 288 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 347 ||||| ||| |||||||||||| || || || ||||| || || |||||||||||||||| Sbjct: 27487933 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 27487992 Query: 348 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 407 || |||||||||||||||||| || ||||| |||||||| | |||||||| || |||| Sbjct: 27487993 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 27488052 Query: 408 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 467 ||||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||| Sbjct: 27488053 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 27488112 Query: 468 tgaactggaagt 479 |||||||||||| Sbjct: 27488113 tgaactggaagt 27488124 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 302 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 361 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 27499871 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27499930 Query: 362 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 421 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 27499931 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 27499990 Query: 422 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagt 479 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||| Sbjct: 27499991 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagt 27500048 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 302 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 361 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 27496890 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27496949 Query: 362 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 421 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 27496950 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 27497009 Query: 422 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagt 479 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||| Sbjct: 27497010 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagt 27497067 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 352 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 411 |||||||||||||||||| |||||||| ||||| || | |||||||| || |||||||| Sbjct: 27492601 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 27492660 Query: 412 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 471 ||||||||| || ||||||||||| || ||||||| |||||||||||| ||||| ||||| Sbjct: 27492661 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 27492720 Query: 472 ctggaagt 479 |||||||| Sbjct: 27492721 ctggaagt 27492728
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 190 bits (96), Expect = 3e-45 Identities = 168/192 (87%) Strand = Plus / Plus Query: 288 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 347 ||||| ||| |||||||||||| || || || ||||| || || |||||||||||||||| Sbjct: 27579256 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 27579315 Query: 348 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 407 || |||||||||||||||||| || ||||| |||||||| | |||||||| || |||| Sbjct: 27579316 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 27579375 Query: 408 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 467 ||||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||| Sbjct: 27579376 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 27579435 Query: 468 tgaactggaagt 479 |||||||||||| Sbjct: 27579436 tgaactggaagt 27579447 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 302 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 361 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 27591194 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27591253 Query: 362 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 421 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 27591254 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 27591313 Query: 422 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagt 479 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||| Sbjct: 27591314 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagt 27591371 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 302 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 361 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 27588213 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27588272 Query: 362 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 421 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 27588273 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 27588332 Query: 422 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagt 479 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||| Sbjct: 27588333 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagt 27588390 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 352 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 411 |||||||||||||||||| |||||||| ||||| || | |||||||| || |||||||| Sbjct: 27583924 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 27583983 Query: 412 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 471 ||||||||| || ||||||||||| || ||||||| |||||||||||| ||||| ||||| Sbjct: 27583984 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 27584043 Query: 472 ctggaagt 479 |||||||| Sbjct: 27584044 ctggaagt 27584051
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 190 bits (96), Expect = 3e-45 Identities = 168/192 (87%) Strand = Plus / Minus Query: 288 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 347 ||||| ||| |||||||||||| || || || ||||| || || |||||||||||||||| Sbjct: 62581 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 62522 Query: 348 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 407 || |||||||||||||||||| || ||||| |||||||| | |||||||| || |||| Sbjct: 62521 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 62462 Query: 408 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 467 ||||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||| Sbjct: 62461 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 62402 Query: 468 tgaactggaagt 479 |||||||||||| Sbjct: 62401 tgaactggaagt 62390 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Minus Query: 302 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 361 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 53624 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 53565 Query: 362 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 421 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 53564 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 53505 Query: 422 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagt 479 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||| Sbjct: 53504 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagt 53447 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Minus Query: 302 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 361 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 50643 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 50584 Query: 362 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 421 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 50583 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 50524 Query: 422 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagt 479 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||| Sbjct: 50523 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagt 50466 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Minus Query: 352 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 411 |||||||||||||||||| |||||||| ||||| || | |||||||| || |||||||| Sbjct: 57913 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 57854 Query: 412 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 471 ||||||||| || ||||||||||| || ||||||| |||||||||||| ||||| ||||| Sbjct: 57853 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 57794 Query: 472 ctggaagt 479 |||||||| Sbjct: 57793 ctggaagt 57786
>dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137P21, full insert sequence Length = 998 Score = 190 bits (96), Expect = 3e-45 Identities = 168/192 (87%) Strand = Plus / Minus Query: 288 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 347 ||||| ||| |||||||||||| || || || ||||| || || |||||||||||||||| Sbjct: 805 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 746 Query: 348 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 407 || |||||||||||||||||| || ||||| |||||||| | |||||||| || |||| Sbjct: 745 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 686 Query: 408 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 467 ||||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||| Sbjct: 685 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 626 Query: 468 tgaactggaagt 479 |||||||||||| Sbjct: 625 tgaactggaagt 614
>emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase (oxO1 gene) Length = 934 Score = 184 bits (93), Expect = 2e-43 Identities = 171/197 (86%) Strand = Plus / Minus Query: 283 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggag 342 |||||||||| |||| ||||| |||||||||||||| |||||||| || ||||| ||||| Sbjct: 777 ttaaaacccaccggcaaacttagacttgagaagttctacgaccccggcatccacacggag 718 Query: 343 cgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcac 402 |||||||||||| || | ||| ||||| || ||||| ||||| |||| ||||| ||||| Sbjct: 717 cgccttggtgagtacggccgtggggattggtgggttggagccaaagacggtgagtggcac 658 Query: 403 aaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttacc 462 |||||||||||||||||| ||||| |||||||| ||||||||||| ||||| ||||| || Sbjct: 657 aaagacgatgccagggttctggctattgaaggatacgaccatggaagcctctgtcttgcc 598 Query: 463 gacgttgaactggaagt 479 |||||||| ||||||| Sbjct: 597 aacgttgaattggaagt 581
>emb|Y09915.1|TAPSBGER1 T.aestivum mRNA for germin-like protein 1 Length = 856 Score = 149 bits (75), Expect = 1e-32 Identities = 171/199 (85%), Gaps = 3/199 (1%) Strand = Plus / Minus Query: 283 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctg-cctccacccgga 341 |||||||||| | |||||||||||||||| |||||| |||||||||| |||| | || | Sbjct: 762 ttaaaacccaccagcgaacttggacttgaaaagttcgacgacccctggcctctatcctta 703 Query: 342 gcgccttggtgagcaccggcgtcgggataggc-gggtttgagccgaagagcgtgagcggc 400 |||||||||||||||||||||| ||||| ||| ||||| || ||||| | ||||||||| Sbjct: 702 gcgccttggtgagcaccggcgt-gggattggccgggttggaaccgaaaaaagtgagcggc 644 Query: 401 acaaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtctta 460 || || || ||||| ||||| |||||||||||||| || |||||| |||| ||||||||| Sbjct: 643 acgaaaacaatgccggggttctggctgttgaaggaaacaaccatgtaggcttccgtctta 584 Query: 461 ccgacgttgaactggaagt 479 || ||| |||||||||||| Sbjct: 583 ccaacgatgaactggaagt 565
>ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Minus Query: 302 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 361 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 807 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 748 Query: 362 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 421 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 747 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 688 Query: 422 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagt 479 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||| Sbjct: 687 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagt 630
>ref|XM_469351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Minus Query: 302 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 361 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 665 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 606 Query: 362 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 421 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 605 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 546 Query: 422 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagt 479 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||| Sbjct: 545 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagt 488
>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full insert sequence Length = 1028 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Minus Query: 302 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 361 ||||||||||| || || || || || || ||||| ||||| |||||| ||||||||| Sbjct: 818 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 759 Query: 362 gtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgatgccagggttt 421 |||||||| |||||||| |||||||| | |||||||| || ||||||||||| ||||| Sbjct: 758 gtcgggatgggcgggttggagccgaacaatgtgagcgggacgaagacgatgccggggttc 699 Query: 422 tggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaactggaagt 479 |||||||||||||| || ||||||| |||||||||||| || |||||||||||||||| Sbjct: 698 tggctgttgaaggacaccaccatggtggcctccgtcttgccaacgttgaactggaagt 641
>gb|AF261942.1|AF261942 Zea mays clone AW042316 germin-like protein 2 (GLP2) mRNA, partial cds Length = 591 Score = 143 bits (72), Expect = 6e-31 Identities = 162/192 (84%) Strand = Plus / Minus Query: 288 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 347 ||||| |||||||||||||||||| || |||||||| | || |||||||||||||||| Sbjct: 211 acccaccggcgaacttggacttgatgagatccacgacactggcgtccacccggagcgcct 152 Query: 348 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 407 ||| |||||||||||| ||||| ||||| |||||||| |||||||| ||||| |||| Sbjct: 151 tggagagcaccggcgtggggatcggcggagaggagccgaacagcgtgaggggcacgaaga 92 Query: 408 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 467 |||||| || || ||||||||||| || || ||||||| ||| ||| ||| ||||||| Sbjct: 91 tgatgcccggtttctggctgttgaacgacaccaccatggtggcgtcctccttgccgacgt 32 Query: 468 tgaactggaagt 479 |||||||||||| Sbjct: 31 tgaactggaagt 20
>gb|AY108860.1| Zea mays PCO074541 mRNA sequence Length = 589 Score = 143 bits (72), Expect = 6e-31 Identities = 162/192 (84%) Strand = Plus / Minus Query: 288 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 347 ||||| |||||||||||||||||| || |||||||| | || |||||||||||||||| Sbjct: 242 acccaccggcgaacttggacttgatgagatccacgacactggcgtccacccggagcgcct 183 Query: 348 tggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaaga 407 ||| |||||||||||| ||||| ||||| |||||||| |||||||| ||||| |||| Sbjct: 182 tggagagcaccggcgtggggatcggcggagaggagccgaacagcgtgaggggcacgaaga 123 Query: 408 cgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgt 467 |||||| || || ||||||||||| || || ||||||| ||| ||| ||| ||||||| Sbjct: 122 tgatgcccggtttctggctgttgaacgacaccaccatggtggcgtcctccttgccgacgt 63 Query: 468 tgaactggaagt 479 |||||||||||| Sbjct: 62 tgaactggaagt 51
>ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Minus Query: 352 gagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcacaaagacgat 411 |||||||||||||||||| |||||||| ||||| || | |||||||| || |||||||| Sbjct: 621 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 562 Query: 412 gccagggttttggctgttgaaggagacgaccatggaggcctccgtcttaccgacgttgaa 471 ||||||||| || ||||||||||| || ||||||| |||||||||||| ||||| ||||| Sbjct: 561 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 502 Query: 472 ctggaagt 479 |||||||| Sbjct: 501 ctggaagt 494
>emb|BX323560.16| Zebrafish DNA sequence from clone DKEY-265E15 in linkage group 4, complete sequence Length = 190574 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 acaaatatatgcaaaatgcaaa 64 |||||||||||||||||||||| Sbjct: 52188 acaaatatatgcaaaatgcaaa 52209
>gb|AC112926.7| Mus musculus chromosome 3, clone RP23-215M7, complete sequence Length = 222106 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 attttttgacaaagatggcaa 89 ||||||||||||||||||||| Sbjct: 151453 attttttgacaaagatggcaa 151473
>gb|AC147010.31| Medicago truncatula clone mth2-145p5, complete sequence Length = 132320 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 actttggaacatgtttgactt 27 ||||||||||||||||||||| Sbjct: 129606 actttggaacatgtttgactt 129626
>gb|AC068984.15| Homo sapiens 3 BAC RP11-549K5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 49251 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aaatatatgcaaaatgcaaac 65 ||||||||||||||||||||| Sbjct: 27711 aaatatatgcaaaatgcaaac 27691
>gb|AC158464.2| Medicago truncatula chromosome 2 BAC clone mth2-145m24, complete sequence Length = 89051 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 actttggaacatgtttgactt 27 ||||||||||||||||||||| Sbjct: 33951 actttggaacatgtttgactt 33931
>dbj|AB210620.1| Ciona intestinalis mRNA for p38 kinase, complete cds, clone: cinc009m21 Length = 3582 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 cttgagaagttccacgacccc 327 ||||||||||||||||||||| Sbjct: 987 cttgagaagttccacgacccc 1007
>dbj|AK173857.1| Ciona intestinalis cDNA, clone:cicl006g22, full insert sequence Length = 1395 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 cttgagaagttccacgacccc 327 ||||||||||||||||||||| Sbjct: 987 cttgagaagttccacgacccc 1007
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 aggagacgaccatggaggcc 451 |||||||||||||||||||| Sbjct: 129387 aggagacgaccatggaggcc 129368
>gb|AF217490.1|AF217491S3 Homo sapiens fragile 16D oxido reductase (FOR) gene, exons 8, 9, and partial cds Length = 270752 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 attggacaaatatatgcaaa 57 |||||||||||||||||||| Sbjct: 179870 attggacaaatatatgcaaa 179851
>gb|AC138359.8| Mus musculus chromosome 1, clone RP24-383H12, complete sequence Length = 217891 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ttggaacatgtttgacttac 29 |||||||||||||||||||| Sbjct: 12786 ttggaacatgtttgacttac 12805
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 tggcaataaaaggtagtaca 103 |||||||||||||||||||| Sbjct: 4454984 tggcaataaaaggtagtaca 4455003
>emb|CR932600.1|CNS0KYBV Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 taacttattcaatttattac 164 |||||||||||||||||||| Sbjct: 2656 taacttattcaatttattac 2637
>gb|AC122814.3| Mus musculus BAC clone RP23-234A12 from 6, complete sequence Length = 144136 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 50 tatgcaaaatgcaaactatattttttga 77 |||| |||||||| |||||||||||||| Sbjct: 111941 tatgaaaaatgcatactatattttttga 111914
>gb|AC004456.1| Homo sapiens PAC clone RP5-1100F23 from 7, complete sequence Length = 143436 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 attttttgacaaagatggcaataa 92 ||||||||||||||||| |||||| Sbjct: 56671 attttttgacaaagatgccaataa 56694
>emb|AL445189.7| Human DNA sequence from clone RP11-249L21 on chromosome 6 Contains part of a novel gene, a ribosomal protein S12 (RPS12) pseudogene, the 5' end of a novel gene, an ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 2 (ATP5J2) psuedogene and part of a novel gene, complete sequence Length = 134566 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 cttctgctgagaatcattaaattt 226 |||||||||||||| ||||||||| Sbjct: 106068 cttctgctgagaattattaaattt 106091
>emb|AL390208.17| Human DNA sequence from clone RP11-787I22 on chromosome 6 Contains the 3' part of a novel gene, the PA26 gene for p53 regulated PA26 nuclear protein and a CpG island, complete sequence Length = 109878 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 cttctgctgagaatcattaaattt 226 |||||||||||||| ||||||||| Sbjct: 11927 cttctgctgagaattattaaattt 11950
>emb|AL135790.7| Human DNA sequence from clone RP11-87N24 on chromosome 9p22.1-23 Contains a ribosomal protein S12 (RPS12) pseudogene, 2 novel genes, the 5' end of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD). and a CpG island, complete sequence Length = 176273 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 tctgaagattaaaccatgag 142 |||||||||||||||||||| Sbjct: 125588 tctgaagattaaaccatgag 125607
>emb|AL133393.16| Human DNA sequence from clone RP1-21P18 on chromosome 6, complete sequence Length = 24112 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 caaatggtaattggacaaat 48 |||||||||||||||||||| Sbjct: 12390 caaatggtaattggacaaat 12409
>emb|X87369.1|CPNANH C.perfringens nanH gene & ORF1,2,3 & 4 Length = 6482 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 tgacaaagatggcaataaaa 94 |||||||||||||||||||| Sbjct: 2430 tgacaaagatggcaataaaa 2449
>gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, complete sequence Length = 190678 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 aaaatgcaaactatattttt 74 |||||||||||||||||||| Sbjct: 102709 aaaatgcaaactatattttt 102690
>gb|AF012825.2| Ectromelia virus strain Moscow, complete genome Length = 209771 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tggacaaatatatgcaaaat 59 |||||||||||||||||||| Sbjct: 62664 tggacaaatatatgcaaaat 62683
>gb|AC027419.11| Homo sapiens chromosome 8, clone RP11-654G14, complete sequence Length = 172880 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 410 atgccagggttttggctgttgaag 433 |||||||||||||||||| ||||| Sbjct: 128903 atgccagggttttggctgctgaag 128926
>gb|AC110788.3| Homo sapiens BAC clone RP11-473D24 from 4, complete sequence Length = 80766 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttattcaatttattacaact 168 |||||||||||||||||||| Sbjct: 36778 ttattcaatttattacaact 36759
>gb|AC084114.8| Homo sapiens chromosome 8, clone RP11-1059L18, complete sequence Length = 189127 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 atgccagggttttggctgttgaag 433 |||||||||||||||||| ||||| Sbjct: 179538 atgccagggttttggctgctgaag 179515
>emb|BX322623.7| Zebrafish DNA sequence from clone CH211-256I14 in linkage group 15, complete sequence Length = 104062 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 aattatgcattgattattta 265 |||||||||||||||||||| Sbjct: 18665 aattatgcattgattattta 18684
>emb|BX649257.8| Zebrafish DNA sequence from clone CH211-197L9 in linkage group 23, complete sequence Length = 182686 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaatgcaaactatatttttt 75 |||||||||||||||||||| Sbjct: 152647 aaatgcaaactatatttttt 152666
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 aggagacgaccatggaggcc 451 |||||||||||||||||||| Sbjct: 15737283 aggagacgaccatggaggcc 15737264
>gb|AC117832.6| Homo sapiens chromosome 15, clone RP11-963M5, complete sequence Length = 171462 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 aaaatgcaaactatattttt 74 |||||||||||||||||||| Sbjct: 11383 aaaatgcaaactatattttt 11402
>gb|AC110073.3| Homo sapiens BAC clone RP11-62A4 from 4, complete sequence Length = 130088 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 tttttgacaaagatggcaataaaa 94 ||||||||||||||| |||||||| Sbjct: 107179 tttttgacaaagatgccaataaaa 107156
>gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complete sequence Length = 208477 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 attggacaaatatatgcaaa 57 |||||||||||||||||||| Sbjct: 195124 attggacaaatatatgcaaa 195105
>gb|AC137643.3| Homo sapiens chromosome 16 clone RP11-95H3, complete sequence Length = 159836 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 tatatgcaaaatgcaaacta 67 |||||||||||||||||||| Sbjct: 39164 tatatgcaaaatgcaaacta 39183
>emb|BX294386.5| Zebrafish DNA sequence from clone CH211-207B9 in linkage group 8, complete sequence Length = 117352 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 aattatgcattgattattta 265 |||||||||||||||||||| Sbjct: 59483 aattatgcattgattattta 59464
>gb|AC009141.7| Homo sapiens chromosome 16 clone RP11-543G23, complete sequence Length = 201716 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 attggacaaatatatgcaaa 57 |||||||||||||||||||| Sbjct: 195587 attggacaaatatatgcaaa 195606
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 tgacaaagatggcaataaaa 94 |||||||||||||||||||| Sbjct: 902163 tgacaaagatggcaataaaa 902182
>emb|BX469936.11| Zebrafish DNA sequence from clone DKEY-32I12 in linkage group 19, complete sequence Length = 141772 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 aaaatgcaaactatattttt 74 |||||||||||||||||||| Sbjct: 127119 aaaatgcaaactatattttt 127100
>gb|AC123676.9| Mus musculus chromosome 1, clone RP23-275F9, complete sequence Length = 169201 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ttggaacatgtttgacttac 29 |||||||||||||||||||| Sbjct: 152208 ttggaacatgtttgacttac 152227
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 acttgagaagttccacgacc 325 |||||||||||||||||||| Sbjct: 2624441 acttgagaagttccacgacc 2624460
>gb|DQ066531.1| Raccoonpox virus isolate rcn-85a DNA polymerase gene, complete cds Length = 3018 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 tggacaaatatatgcaaaat 59 |||||||||||||||||||| Sbjct: 2805 tggacaaatatatgcaaaat 2786
>gb|AC171501.2| Mus musculus BAC clone RP23-255N3 from chromosome 6, complete sequence Length = 170938 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 50 tatgcaaaatgcaaactatattttttga 77 |||| |||||||| |||||||||||||| Sbjct: 123679 tatgaaaaatgcatactatattttttga 123706
>emb|AL672008.8| Mouse DNA sequence from clone RP23-389M3 on chromosome X, complete sequence Length = 160571 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 aaatatatgcaaaatgcaaa 64 |||||||||||||||||||| Sbjct: 3176 aaatatatgcaaaatgcaaa 3195 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,667,871 Number of Sequences: 3902068 Number of extensions: 4667871 Number of successful extensions: 107453 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107113 Number of HSP's gapped (non-prelim): 325 length of query: 479 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 457 effective length of database: 17,147,199,772 effective search space: 7836270295804 effective search space used: 7836270295804 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)