Clone Information

BLAST Search Result

Clone Name	rbart46d08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DHB4_HUMAN (P51659) Peroxisomal multifunctional enzyme type 2 (M...	66	2e-11
2	DHB4_RAT (P97852) Peroxisomal multifunctional enzyme type 2 (MFE...	65	5e-11
3	DHB4_MOUSE (P51660) Peroxisomal multifunctional enzyme type 2 (M...	64	7e-11
4	FOX2_NEUCR (Q01373) Peroxisomal hydratase-dehydrogenase-epimeras...	54	7e-08
5	FOX2_YEAST (Q02207) Peroxisomal hydratase-dehydrogenase-epimeras...	37	0.015
6	EMR2_HUMAN (Q9UHX3) EGF-like module-containing mucin-like hormon...	35	0.033
7	CD97_HUMAN (P48960) CD97 antigen precursor (Leukocyte antigen CD97)	35	0.033
8	KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-ass...	34	0.097
9	ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog	33	0.17
10	ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog	33	0.17
11	DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila D...	33	0.17
12	SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precurs...	33	0.22
13	ZIPA_ECOLI (P77173) Cell division protein zipA	31	0.63
14	ZIPA_ECO57 (Q8X492) Cell division protein zipA homolog	31	0.63
15	FOX2_CANTR (P22414) Peroxisomal hydratase-dehydrogenase-epimeras...	31	0.63
16	ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog	31	0.63
17	ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog	31	0.63
18	ARHG1_RAT (Q9Z1I6) Rho guanine nucleotide exchange factor 1 (Lbc...	31	0.82
19	ARVC_HUMAN (O00192) Armadillo repeat protein deleted in velo-car...	31	0.82
20	SPY1_HUMAN (O43609) Sprouty homolog 1 (Spry-1)	30	1.1
21	CELR3_RAT (O88278) Cadherin EGF LAG seven-pass G-type receptor 3...	30	1.1
22	YCR2_ENTAG (Q01336) Hypothetical protein in crtE 3'region (ORF2)...	30	1.1
23	DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila D...	30	1.4
24	LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-bind...	30	1.8
25	TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-li...	29	2.4
26	SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)	29	2.4
27	CELR3_MOUSE (Q91ZI0) Cadherin EGF LAG seven-pass G-type receptor...	29	2.4
28	ARHG1_MOUSE (Q61210) Rho guanine nucleotide exchange factor 1 (L...	29	2.4
29	KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-ass...	29	2.4
30	FBLN1_CHICK (O73775) Fibulin-1 precursor	29	2.4
31	CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor...	29	2.4
32	SLP2_DROME (P32031) Fork head domain transcription factor slp2 (...	29	3.1
33	STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1...	29	3.1
34	NID2_MOUSE (O88322) Nidogen-2 precursor (NID-2) (Entactin-2)	28	4.1
35	YKPC_SCHPO (Q9HDZ2) Hypothetical protein C589.12 in chromosome I	28	4.1
36	USH2A_RAT (Q8K3K1) Usherin precursor (Usher syndrome type-2A pro...	28	4.1
37	FBP1_DROME (Q04691) Fat-body protein 1 precursor (P1 protein)	28	4.1
38	CJ095_HUMAN (Q9H7T3) Protein C10orf95	28	4.1
39	LAMB2_MOUSE (Q61292) Laminin beta-2 chain precursor (S-laminin) ...	28	4.1
40	CD97_BOVIN (Q8SQA4) CD97 antigen precursor	28	4.1
41	NOTC1_BRARE (P46530) Neurogenic locus notch homolog protein 1 pr...	28	4.1
42	FX4L4_HUMAN (Q8WXT5) Forkhead box protein D4-like 4 (Forkhead bo...	28	4.1
43	CD97_MOUSE (Q9Z0M6) CD97 antigen precursor	28	4.1
44	NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 pr...	28	4.1
45	ARVC_MOUSE (P98203) Armadillo repeat protein deleted in velo-car...	28	4.1
46	NOTCH_DROME (P07207) Neurogenic locus Notch protein precursor	28	4.1
47	CCR10_HUMAN (P46092) C-C chemokine receptor type 10 (C-C CKR-10)...	28	4.1
48	Y303_ARCFU (O29939) Hypothetical protein AF0303	28	5.3
49	SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor	28	5.3
50	MT1_TETTH (Q8T6B3) Metallothionein-1 (MT-1)	28	5.3
51	FATH_HUMAN (Q14517) Cadherin-related tumor suppressor homolog pr...	28	5.3
52	Y2081_STRCO (P45497) UPF0124 protein SCO2081	28	5.3
53	SECY_LACLC (P27148) Preprotein translocase secY subunit	28	6.9
54	MUA3_CAEEL (P34576) Transmembrane cell adhesion receptor mua-3 p...	28	6.9
55	KRA98_HUMAN (Q9BYQ0) Keratin-associated protein 9-8 (Keratin-ass...	28	6.9
56	K1H2_HUMAN (Q14532) Keratin, type I cuticular Ha2 (Hair keratin,...	28	6.9
57	SPIKE_CVBV (P25194) Spike glycoprotein precursor (Peplomer prote...	28	6.9
58	SPIKE_CVBQ (P25193) Spike glycoprotein precursor (Peplomer prote...	28	6.9
59	SPIKE_CVBM (P15777) Spike glycoprotein precursor (Peplomer prote...	28	6.9
60	SPIKE_CVBLY (P25192) Spike glycoprotein precursor (Peplomer prot...	28	6.9
61	SPIKE_CVBL9 (P25191) Spike glycoprotein precursor (Peplomer prot...	28	6.9
62	SPIKE_CVBF (P25190) Spike glycoprotein precursor (Peplomer prote...	28	6.9
63	EMR3_HUMAN (Q9BY15) EGF-like module-containing mucin-like hormon...	28	6.9
64	AGRN_RAT (P25304) Agrin precursor	28	6.9
65	ESXM_MYCBO (P59805) ESAT-6-like protein esxM	27	9.1
66	ESXK_MYCTU (O05299) ESAT-6-like protein esxK	27	9.1
67	ESXJ_MYCTU (P96363) ESAT-6-like protein esxJ	27	9.1
68	ESXJ_MYCBO (P59803) ESAT-6-like protein esxJ/esxK	27	9.1
69	ES6LA_MYCTU (O07932) Putative ESAT-6-like protein 10	27	9.1
70	ES6L7_MYCTU (P95243) Putative ESAT-6-like protein 7	27	9.1
71	TPN1_YEAST (P53099) Vitamin B6 transporter TPN1 (Transport of py...	27	9.1
72	TPN1_SACPS (Q874L4) Vitamin B6 transporter TPN1 (Transport of py...	27	9.1
73	LAMB2_RAT (P15800) Laminin beta-2 chain precursor (S-laminin) (L...	27	9.1
74	LAP4_MOUSE (Q80U72) LAP4 protein (Scribble homolog protein)	27	9.1

>DHB4_HUMAN (P51659) Peroxisomal multifunctional enzyme type 2 (MFE-2)|
           (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid
           dehydrogenase 4) (17-beta-HSD 4) [Includes:
           D-3-hydroxyacyl-CoA dehydratase (EC 4.2.1.107)
           (3-alpha,7-alpha,12-alpha-trihydroxy-5
          Length = 735

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 30/65 (46%), Positives = 42/65 (64%)
 Frame = -2

Query: 388 CTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERD 209
           CT GF+AR V++ F + D +  + I  RF   VYPG+TL TEMW +G R+ +QTK +E  
Sbjct: 534 CTFGFSARRVLQQFADNDVSRFKAIKARFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETG 593

Query: 208 RAVLS 194
             V+S
Sbjct: 594 DIVIS 598

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>DHB4_RAT (P97852) Peroxisomal multifunctional enzyme type 2 (MFE-2)|
           (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid
           dehydrogenase 4) (17-beta-HSD 4) [Includes:
           D-3-hydroxyacyl-CoA dehydratase (EC 4.2.1.107)
           (3-alpha,7-alpha,12-alpha-trihydroxy-5-b
          Length = 734

 Score = 64.7 bits (156), Expect = 5e-11
 Identities = 30/65 (46%), Positives = 42/65 (64%)
 Frame = -2

Query: 388 CTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERD 209
           CT GF+AR V++ F + D +  + I  RF   VYPG+TL TEMW +G R+ +QTK +E  
Sbjct: 533 CTFGFSARHVLQQFADNDVSRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETG 592

Query: 208 RAVLS 194
             V+S
Sbjct: 593 DIVIS 597

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>DHB4_MOUSE (P51660) Peroxisomal multifunctional enzyme type 2 (MFE-2)|
           (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid
           dehydrogenase 4) (17-beta-HSD 4) [Includes:
           D-3-hydroxyacyl-CoA dehydratase (EC 4.2.1.107)
           (3-alpha,7-alpha,12-alpha-trihydroxy-5
          Length = 734

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 30/65 (46%), Positives = 41/65 (63%)
 Frame = -2

Query: 388 CTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERD 209
           CT GF+AR V++ F + D +  + I  RF   VYPG+TL TEMW +G R+ +QTK  E  
Sbjct: 533 CTFGFSARHVLQQFADNDVSRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVHETG 592

Query: 208 RAVLS 194
             V+S
Sbjct: 593 DVVIS 597

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>FOX2_NEUCR (Q01373) Peroxisomal hydratase-dehydrogenase-epimerase (HDE)|
            (Multifunctional beta-oxidation protein) (MFP) [Includes:
            2-enoyl-CoA hydratase (EC 4.2.1.-); D-3-hydroxyacyl CoA
            dehydrogenase (EC 1.1.1.-)]
          Length = 894

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 28/66 (42%), Positives = 39/66 (59%)
 Frame = -2

Query: 388  CTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERD 209
            C+ G A +AV + +        +NI  RF   V PG+TLVTEMW +G +V +QTK KE  
Sbjct: 828  CSFGIAGKAVYEKY-----GKFKNIKVRFAGTVNPGQTLVTEMWKEGNKVVFQTKVKETG 882

Query: 208  RAVLSG 191
            +  +SG
Sbjct: 883  KLAISG 888

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>FOX2_YEAST (Q02207) Peroxisomal hydratase-dehydrogenase-epimerase (HDE)|
            (Multifunctional beta-oxidation protein) (MFP) [Includes:
            2-enoyl-CoA hydratase (EC 4.2.1.-); D-3-hydroxyacyl CoA
            dehydrogenase (EC 1.1.1.-)]
          Length = 900

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 23/78 (29%), Positives = 36/78 (46%)
 Frame = -2

Query: 388  CTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERD 209
            CTLG +A+A+ + +        + +  RF   V+PG+TL  + W  G  V +QT    R+
Sbjct: 828  CTLGISAKALFEHY-----GPYEELKVRFTNVVFPGDTLKVKAWKQGSVVVFQTIDTTRN 882

Query: 208  RAVLSGYVLLKQHIPSSL 155
              VL    +      S L
Sbjct: 883  VIVLDNAAVKLSQAKSKL 900

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>EMR2_HUMAN (Q9UHX3) EGF-like module-containing mucin-like hormone|
           receptor-like 2 precursor (EGF-like module EMR2) (CD312
           antigen)
          Length = 823

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
 Frame = -3

Query: 330 RLCRTYLAGSC--------CTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSN 175
           RLC++Y  G+C        C   PG +  P    +   C+      S   PC   T C N
Sbjct: 128 RLCKSY--GTCVNTLGSYTCQCLPGFKLKPEDPKL---CTDVNECTSGQNPCHSSTHCLN 182

Query: 174 NTSPHHCKCR 145
           N   + C+CR
Sbjct: 183 NVGSYQCRCR 192



 Score = 27.3 bits (59), Expect = 9.1
 Identities = 21/82 (25%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
 Frame = -3

Query: 378 GSRPVRSSSRFATGIQRLCRTYLAGSCCTSTPGKRWSPRCGSMARG----CSTRPRRKSA 211
           G  P  SS+         C   +    C   PG  W P  GS        C       S 
Sbjct: 170 GQNPCHSSTH--------CLNNVGSYQCRCRPG--WQPIPGSPNGPNNTVCEDVDECSSG 219

Query: 210 TAPCSPDTCCSNNTSPHHCKCR 145
              C   T C N    + C+CR
Sbjct: 220 QHQCDSSTVCFNTVGSYSCRCR 241

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>CD97_HUMAN (P48960) CD97 antigen precursor (Leukocyte antigen CD97)|
          Length = 835

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
 Frame = -3

Query: 330 RLCRTYLAGSC--------CTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSN 175
           RLC++Y  G+C        C   PG ++ P    +   C+      S   PC   T C N
Sbjct: 125 RLCKSY--GTCVNTLGSYTCQCLPGFKFIPEDPKV---CTDVNECTSGQNPCHSSTHCLN 179

Query: 174 NTSPHHCKCR 145
           N   + C+CR
Sbjct: 180 NVGSYQCRCR 189



 Score = 27.3 bits (59), Expect = 9.1
 Identities = 21/82 (25%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
 Frame = -3

Query: 378 GSRPVRSSSRFATGIQRLCRTYLAGSCCTSTPGKRWSPRCGSMARG----CSTRPRRKSA 211
           G  P  SS+         C   +    C   PG  W P  GS        C       S 
Sbjct: 167 GQNPCHSSTH--------CLNNVGSYQCRCRPG--WQPIPGSPNGPNNTVCEDVDECSSG 216

Query: 210 TAPCSPDTCCSNNTSPHHCKCR 145
              C   T C N    + C+CR
Sbjct: 217 QHQCDSSTVCFNTVGSYSCRCR 238

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>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein|
           5.9) (Ultrahigh sulfur keratin-associated protein 5.9)
           (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra
           high-sulfur matrix protein A) (UHS keratin A) (UHS KerA)
          Length = 169

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = -3

Query: 303 SCCTSTPGKRWSPRCGSMARGC-STRPRRKSATAPCSPDTCCSNNTSPHHCKCRC 142
           +C  S+ GKR    CG    GC S    + S   PC    CCS+      C+C C
Sbjct: 51  ACSCSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKPC----CCSSGCGSSCCQCSC 101



 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/61 (26%), Positives = 22/61 (36%)
 Frame = -3

Query: 324 CRTYLAGSCCTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCR 145
           C +    SCC  +  K +  +C      CS+  R  S    C   +CC    S   C   
Sbjct: 88  CSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSS----CCQSSCCKPCCSSSGCGSS 143

Query: 144 C 142
           C
Sbjct: 144 C 144

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>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog|
          Length = 328

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 164 GDV-LFEQHVSGEHGAVALFRLGLVLHPLAIDPHLGDQRFPGVDVQQEPAKY 316
           GD+ +F +H+S +    ALF L  +++P   DP + D   PGV +  +   Y
Sbjct: 224 GDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTDFTTPGVTIFMQVPSY 275

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>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog|
          Length = 328

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 164 GDV-LFEQHVSGEHGAVALFRLGLVLHPLAIDPHLGDQRFPGVDVQQEPAKY 316
           GD+ +F +H+S +    ALF L  +++P   DP + D   PGV +  +   Y
Sbjct: 224 GDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTDFTTPGVTIFMQVPSY 275

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>DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3) (M-Delta-3)
          Length = 592

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
 Frame = -3

Query: 324 CRTYLAGSCCTSTPGKRWSP-RCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKC 148
           C     G+ C      R +P RCG   R C+  P    A + C P     +       +C
Sbjct: 176 CEPPAVGAACARLCRSRSAPSRCGPGLRPCTPFPDECEAPSVCRPGCSPEHGYCEEPDEC 235

Query: 147 RCVIRTIGEICS 112
           RC+    G +C+
Sbjct: 236 RCLEGWTGPLCT 247

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>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL|
           receptor) (Scavenger receptor class F member 1)
          Length = 830

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 10/79 (12%)
 Frame = -3

Query: 321 RTYLAGSCCTSTPGKRWSPRC------GSMARGCSTRPRRKSATAPCSPDT----CCSNN 172
           R   A   CT  PG R + RC      GS    C+    R     PCSPDT     C   
Sbjct: 229 RCSAASGECTCPPGFRGA-RCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPG 287

Query: 171 TSPHHCKCRCVIRTIGEIC 115
            +   C+  C+  T GE C
Sbjct: 288 WNGTQCQQPCLPGTFGESC 306

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>ZIPA_ECOLI (P77173) Cell division protein zipA|
          Length = 328

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 164 GDV-LFEQHVSGEHGAVALFRLGLVLHPLAIDPHLGDQRFPGVDVQQEPAKY 316
           GD+ ++ +H+S +    ALF L  ++ P   DP + D   PGV +  +   Y
Sbjct: 224 GDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSY 275

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>ZIPA_ECO57 (Q8X492) Cell division protein zipA homolog|
          Length = 328

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 164 GDV-LFEQHVSGEHGAVALFRLGLVLHPLAIDPHLGDQRFPGVDVQQEPAKY 316
           GD+ ++ +H+S +    ALF L  ++ P   DP + D   PGV +  +   Y
Sbjct: 224 GDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSY 275

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>FOX2_CANTR (P22414) Peroxisomal hydratase-dehydrogenase-epimerase (HDE)|
           (Multifunctional beta-oxidation protein) (MFP)
           [Includes: 2-enoyl-CoA hydratase (EC 4.2.1.-);
           D-3-hydroxyacyl CoA dehydrogenase (EC 1.1.1.-)]
          Length = 906

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -2

Query: 388 CTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDG-QRVQYQTKAKER 212
           CT G +A+A+I  F          I  RF   V+PGETL    W +    + +QT   +R
Sbjct: 833 CTYGLSAKALIDKF-----GMFNEIKARFTGIVFPGETLRVLAWKESDDTIVFQTHVVDR 887

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>ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog|
          Length = 327

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 164 GDV-LFEQHVSGEHGAVALFRLGLVLHPLAIDPHLGDQRFPGVDVQQEPAKY 316
           GD+ ++ +H+S +    ALF L  ++ P   DP + D   PGV +  +   Y
Sbjct: 223 GDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSY 274

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>ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog|
          Length = 332

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 164 GDV-LFEQHVSGEHGAVALFRLGLVLHPLAIDPHLGDQRFPGVDVQQEPAKY 316
           GD+ ++ +H+S +    ALF L  ++ P   DP + D   PGV +  +   Y
Sbjct: 228 GDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSY 279

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>ARHG1_RAT (Q9Z1I6) Rho guanine nucleotide exchange factor 1 (Lbc's second|
           cousin)
          Length = 919

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +2

Query: 227 GLVLHPLAIDPHLGDQRFPGVDVQQEP 307
           G+ LHPL++D    D R PGVD  QEP
Sbjct: 320 GVSLHPLSVDSL--DSREPGVDTPQEP 344

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>ARVC_HUMAN (O00192) Armadillo repeat protein deleted in velo-cardio-facial|
           syndrome
          Length = 962

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -3

Query: 336 IQRLCRTYLA-GSCCTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTC 184
           +  L R YL+ G      P  R SP  GS++RG   RP R     P   D C
Sbjct: 175 VATLSRAYLSSGGGFPEGPEPRDSPSYGSLSRGLGMRPPRAGPLGPGPGDGC 226

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>SPY1_HUMAN (O43609) Sprouty homolog 1 (Spry-1)|
          Length = 319

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
 Frame = -3

Query: 375 SRPV---RSSSRFATGIQRLCRTYLAGSCCTS-TPGKRWSPRCGSMARGCSTRPRRKSAT 208
           +RPV   RS     T  ++L    L GS     T  K    +CG    G  T PR   + 
Sbjct: 142 TRPVPGHRSERAIRTQPKQLIVDDLKGSLKEDLTQHKFICEQCGKCKCGECTAPRTLPSC 201

Query: 207 APCSPDTCCSNNTSPHHCKCRCVIRTIGEICS 112
             C+    CS  +   +  C C+++ I   CS
Sbjct: 202 LACNRQCLCSAESMVEYGTCMCLVKGIFYHCS 233

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>CELR3_RAT (O88278) Cadherin EGF LAG seven-pass G-type receptor 3 precursor|
            (Multiple epidermal growth factor-like domains 2)
          Length = 3313

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
 Frame = -3

Query: 297  CTSTPGKRWSPRCGSMARGCST-----RPRRKSATAPCS--PDTCCSNNTSPHHCKCRCV 139
            C     K + P C   +  C       RPR   +  PC   P    S + +PH  +C C 
Sbjct: 2031 CNCDVHKGFDPNCNKTSGQCHCKEFHYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCR 2090

Query: 138  IRTIGEICS 112
               +G  C+
Sbjct: 2091 PGALGRQCN 2099

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>YCR2_ENTAG (Q01336) Hypothetical protein in crtE 3'region (ORF2) (Fragment)|
          Length = 529

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 343 NGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAV 200
           NG+ +AV N+ G+   +   GE L+ EMW     V      K +D+ V
Sbjct: 68  NGNISAVLNLKGQLAFYNQRGELLLEEMWRQRSTVGIGASEKSQDKYV 115

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>DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila Delta homolog|
           4)
          Length = 686

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
 Frame = -3

Query: 306 GSCCTSTPGKRWSPRCGSMARGCSTRPRRKS-ATAPCSPDTCCSNNTSPHHCKCRCVIRT 130
           G+C     G   +   G   R C  R    + A+ PC     C    SP++  C C    
Sbjct: 454 GTCHDLENGPVCTCPAGFSGRRCEVRITHDACASGPCFNGATCYTGLSPNNFVCNCPYGF 513

Query: 129 IGEICSY 109
           +G  C +
Sbjct: 514 VGSRCEF 520

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>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4|
            precursor (LTBP-4)
          Length = 1666

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
 Frame = -3

Query: 324  CRTYLA--GSCCTSTPGK---RWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPH 160
            C   LA  G  C ++PG    R  P    + RG  T     S+  PC     C+N     
Sbjct: 841  CENRLACPGQECVNSPGSFQCRACPVGHHLHRGRCTDVDECSSGTPCGLHGQCTNTKGSF 900

Query: 159  HCKC 148
            HC C
Sbjct: 901  HCSC 904

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>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)|
          Length = 4289

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 14/76 (18%)
 Frame = -3

Query: 297 CTSTPGKRWSPRCG--SMARGCSTRPRRKSATAPCSPDTC---CSNNTSPHHC------- 154
           C   PG      CG  S  RGCS R R K     C P      C   + P  C       
Sbjct: 295 CVCNPGYTGED-CGVRSCPRGCSQRGRCKDGRCVCDPGYTGEDCGTRSCPWDCGEGGRCV 353

Query: 153 --KCRCVIRTIGEICS 112
             +C C     GE CS
Sbjct: 354 DGRCVCWPGYTGEDCS 369

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>SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)|
          Length = 313

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = -3

Query: 264 RCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCRCVIRTIGEICS 112
           +CG    G  T PR   +   C     CS  +   +  C C+++ I   CS
Sbjct: 177 QCGKCKCGECTAPRALPSCLACDRQCLCSAESMVEYGTCMCLVKGIFYHCS 227

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>CELR3_MOUSE (Q91ZI0) Cadherin EGF LAG seven-pass G-type receptor 3 precursor|
          Length = 3301

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
 Frame = -3

Query: 297  CTSTPGKRWSPRCGSMARGCST-----RPRRKSATAPCS--PDTCCSNNTSPHHCKCRCV 139
            C     K + P C      C       RPR   +  PC   P    S + +PH  +C C 
Sbjct: 2029 CNCDVHKGFDPNCNKTNGQCHCKEFHYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCR 2088

Query: 138  IRTIGEICS 112
               +G  C+
Sbjct: 2089 PGALGRQCN 2097

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>ARHG1_MOUSE (Q61210) Rho guanine nucleotide exchange factor 1 (Lymphoid blast|
           crisis-like 2) (Lbc's second cousin)
          Length = 920

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +2

Query: 227 GLVLHPLAIDPHLGDQRFPGVDVQQEP 307
           G+ LHPL+ D    D R PGVD  QEP
Sbjct: 321 GVSLHPLSTDSV--DSREPGVDTPQEP 345

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>KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-associated protein|
           9.4) (Ultrahigh sulfur keratin-associated protein 9.4)
          Length = 154

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/61 (29%), Positives = 21/61 (34%)
 Frame = -3

Query: 324 CRTYLAGSCCTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCR 145
           CRT    +CC +T  K  +    S    C       S   PC   TCC N      C   
Sbjct: 14  CRT----TCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCCQPTCVTS 69

Query: 144 C 142
           C
Sbjct: 70  C 70

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>FBLN1_CHICK (O73775) Fibulin-1 precursor|
          Length = 704

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 13/68 (19%)
 Frame = -3

Query: 309 AGSCCTSTPG----KRWSPRCGSMARG---------CSTRPRRKSATAPCSPDTCCSNNT 169
           AG  C +T G    +R SP CG   RG         C       S+  PC     C N  
Sbjct: 322 AGQICINTDGSYTCQRISPSCG---RGYHLNEDGTRCVDVDECSSSDQPCGEGHVCINGP 378

Query: 168 SPHHCKCR 145
             + C+C+
Sbjct: 379 GNYRCECK 386

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>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor|
            (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth
            factor-like domains 2) (Epidermal growth factor-like 1)
          Length = 3312

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
 Frame = -3

Query: 297  CTSTPGKRWSPRCGSMARGCST-----RPRRKSATAPCS--PDTCCSNNTSPHHCKCRCV 139
            C     K + P C      C       RPR   +  PC   P    S + +PH  +C C 
Sbjct: 2040 CNCDVHKGFDPNCNKTNGQCHCKEFHYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCR 2099

Query: 138  IRTIGEICS 112
               +G  C+
Sbjct: 2100 PGALGRQCN 2108

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>SLP2_DROME (P32031) Fork head domain transcription factor slp2 (Sloppy paired|
           locus protein 2)
          Length = 445

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 246 RGCSTRPRRKSATAPCSPDTCCSNNTSP 163
           R  S  PR  S+T+ CS ++CC N   P
Sbjct: 362 RPSSHHPRAVSSTSDCSTNSCCINMRQP 389

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>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)|
          Length = 2570

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 29/118 (24%), Positives = 41/118 (34%), Gaps = 26/118 (22%)
 Frame = -3

Query: 387  APWGSRPVRSSSRFATGIQRLCRTYLAGSCCTSTPGKRWSPRC----------------G 256
            +P   R V       +G Q LCR+  AG+ C       + P C                G
Sbjct: 1977 SPCSDRGVCMDGMSGSG-QCLCRSGFAGTACELCAPGAFGPHCQACRCTVHGRCDEGLGG 2035

Query: 255  SMARGCS---TRPR-------RKSATAPCSPDTCCSNNTSPHHCKCRCVIRTIGEICS 112
            S +  C    T PR       +   T PC+P+  C    S   C+C       G +C+
Sbjct: 2036 SGSCFCDEGWTGPRCEVQLELQPVCTPPCAPEAVCRAGNS---CECSLGYEGDGRVCT 2090

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>NID2_MOUSE (O88322) Nidogen-2 precursor (NID-2) (Entactin-2)|
          Length = 1403

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = -3

Query: 297 CTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCR 145
           C  TPG +   R       C+T   R      C P++ C N    + C+CR
Sbjct: 809 CECTPGFQGDGRSCVDVNECATGFHR------CGPNSVCVNLVGSYRCECR 853

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>YKPC_SCHPO (Q9HDZ2) Hypothetical protein C589.12 in chromosome I|
          Length = 971

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -2

Query: 127 W*DLFLLGAMISC*PWWSGKRPVARCKLCQDMASVVQMIYSS 2
           W D+F++G +IS  PW+     V++C     MAS ++ I S+
Sbjct: 129 WHDIFMIGYLISNAPWFI---LVSKCSPVNSMASRIRNIGSA 167

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>USH2A_RAT (Q8K3K1) Usherin precursor (Usher syndrome type-2A protein homolog)|
            (Usher syndrome type IIa protein homolog)
          Length = 1512

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 10/65 (15%)
 Frame = -3

Query: 312  LAGSCCTSTPGK------RWSPRCGSMARGCSTRPRRKSATAPCSPDTC----CSNNTSP 163
            L GS C    G+      R   RC     GC + P   +   PC   T     C  N+  
Sbjct: 904  LLGSMCDPVSGQCLCLPHRQERRCVQCQPGCYSSPSNATGCLPCLCHTVATKNCICNSVT 963

Query: 162  HHCKC 148
             HC C
Sbjct: 964  GHCYC 968

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>FBP1_DROME (Q04691) Fat-body protein 1 precursor (P1 protein)|
          Length = 1029

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -2

Query: 265 EMWVDGQRVQYQTKAKERD 209
           E WV  QRVQYQ   +ERD
Sbjct: 296 EQWVGRQRVQYQDNNQERD 314

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>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
 Frame = -3

Query: 309 AGSCCTSTPGKRWS----PRCG---SMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCK 151
           AG+C  S  G  WS    P C    S A  C  R      TAP    TC S + +   C 
Sbjct: 161 AGACKPSCAGAAWSARGAPLCSYRTSCAGSCGAR------TAPTPAPTCASPSAAASSC- 213

Query: 150 CR 145
           CR
Sbjct: 214 CR 215

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>LAMB2_MOUSE (Q61292) Laminin beta-2 chain precursor (S-laminin) (S-LAM)|
          Length = 1799

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 201 CSPDTCCSNNTSPHHCKCRCVIRTIGEIC 115
           C P    S+  SPH  +CRC    +G  C
Sbjct: 786 CDPQGSLSSECSPHGGQCRCKPGVVGRRC 814

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>CD97_BOVIN (Q8SQA4) CD97 antigen precursor|
          Length = 734

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
 Frame = -3

Query: 324 CRTYLAGSCCTSTPGKRWSPRCGSMA------RGCSTRPRRKSATAPCSPDTCCSNNTSP 163
           C+    G  CT +PG  + P  G+M         C       S    C   T C N    
Sbjct: 89  CQNTEGGYYCTCSPG--YEPVSGAMIFRNESENTCRDVDECSSGQHQCHNSTVCFNTVGS 146

Query: 162 HHCKCR 145
           + C CR
Sbjct: 147 YTCHCR 152

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>NOTC1_BRARE (P46530) Neurogenic locus notch homolog protein 1 precursor|
          Length = 2437

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = -3

Query: 306 GSCCTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCRCVIRTI 127
           G+C   T G   + R G     C      + A+ PC     C ++ +    KC C++   
Sbjct: 764 GTCKDMTSGYLCTCRAGFSGPNCQMNIN-ECASNPCLNQGSCIDDVAGF--KCNCMLPYT 820

Query: 126 GEIC 115
           GE+C
Sbjct: 821 GEVC 824

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>FX4L4_HUMAN (Q8WXT5) Forkhead box protein D4-like 4 (Forkhead box protein D4B)|
           (Myeloid factor-gamma)
          Length = 416

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 228 PRRKSATAPCS--PDTCCSNNTSPHHCKCRCVIRTIGEICS 112
           PR + ATA CS     CC     P  CKC   +  +G+ CS
Sbjct: 346 PRPRGATATCSSDHQACCIPKPLPLCCKCPPPL-LLGQFCS 385

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>CD97_MOUSE (Q9Z0M6) CD97 antigen precursor|
          Length = 818

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
 Frame = -3

Query: 324 CRTYLAGSCCTSTPGKRWSPRCGS----MARGCSTRPRRKSATAPCSPDTCCSNNTSPHH 157
           C   L G  C    G  W P  GS    ++  C       S    C   T C N    + 
Sbjct: 182 CINKLGGYSCICRQG--WKPVPGSPNGPVSTVCEDVDECSSGQHQCHNSTVCKNTVGSYK 239

Query: 156 CKCR 145
           C CR
Sbjct: 240 CHCR 243

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>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch|
           3) [Contains: Notch 3 extracellular truncation; Notch 3
           intracellular domain]
          Length = 2321

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = -3

Query: 327 LCRTYLAGSCCTSTPGKRWS-PRCG-SMAR-GCSTRPRRKSATAPCSPDTCCSNNTSPHH 157
           +C     G  C   PG  WS PRC  S+AR  C ++P        C     CS++    H
Sbjct: 708 ICYDAPGGFRCVCEPG--WSGPRCSQSLARDACESQP--------CRAGGTCSSDGMGFH 757

Query: 156 CKC 148
           C C
Sbjct: 758 CTC 760



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
 Frame = -3

Query: 306 GSCCTSTPGKRWSPRCGSMARG--CSTRPRRKSATAPCSPDTCCSNNTSPHHCKC 148
           G  C S PG+     C    +G  C       +  APC P   C+N      C C
Sbjct: 783 GGRCESAPGQLPVCSCPQGWQGPRCQQDVDECAGPAPCGPHGICTNLAGSFSCTC 837

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>ARVC_MOUSE (P98203) Armadillo repeat protein deleted in velo-cardio-facial|
           syndrome homolog
          Length = 962

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = -3

Query: 327 LCRTY-LAGSCCTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTC 184
           L RTY  +G      P  R  P  GS++RG   RP R     P   D C
Sbjct: 180 LSRTYHSSGGGFPDGPESRDIPSYGSLSRGLGVRPPRTGLLGPGPGDGC 228

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>NOTCH_DROME (P07207) Neurogenic locus Notch protein precursor|
          Length = 2703

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
 Frame = -3

Query: 306 GSCCTSTPGKRWSPRC--GSMARGCSTRPRRKSATAPCSPDTC-----CSNNTSPHHCKC 148
           G  C +T G  +   C  G   + C T+ +      PCSP  C     C +N   + CKC
Sbjct: 229 GGTCVNTHGS-YQCMCPTGYTGKDCDTKYK------PCSPSPCQNGGICRSNGLSYECKC 281



 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/70 (22%), Positives = 25/70 (35%)
 Frame = -3

Query: 318 TYLAGSCCTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCRCV 139
           T L G  C     + ++  C +   G     +   A++PC     C+         C C 
Sbjct: 147 TCLNGGTCQLKTLEEYTCACANGYTGERCETKNLCASSPCRNGATCTALAGSSSFTCSCP 206

Query: 138 IRTIGEICSY 109
               G+ CSY
Sbjct: 207 PGFTGDTCSY 216

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>CCR10_HUMAN (P46092) C-C chemokine receptor type 10 (C-C CKR-10) (CC-CKR-10)|
           (CCR-10) (G-protein coupled receptor 2)
          Length = 362

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/50 (38%), Positives = 22/50 (44%)
 Frame = -3

Query: 351 RFATGIQRLCRTYLAGSCCTSTPGKRWSPRCGSMARGCSTRPRRKSATAP 202
           RF   ++RL R    G  C S P  R         RGC  RPR  S +AP
Sbjct: 316 RFRQDLRRLLR----GGSCPSGPQPR---------RGCPRRPRLSSCSAP 352

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>Y303_ARCFU (O29939) Hypothetical protein AF0303|
          Length = 397

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
 Frame = +2

Query: 170 VLFEQHVSGEHGAVALF-----------RLGLVLHPLAIDPHLGDQRFPGVDVQQEPAKY 316
           VLF+  +S E+ ++ +F           R  + LHP   DP  GD     V ++ E  + 
Sbjct: 277 VLFQHPISNENRSIIVFNEIYIPQNAKLRFSIALHPDVWDPEKGDGVTFEVYIRDEGFEE 336

Query: 317 VLHSRWIPVAKRLDDR 364
           ++ S++I      ++R
Sbjct: 337 LVFSKYIDPKHNPEER 352

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>SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor|
          Length = 297

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 13/66 (19%)
 Frame = -3

Query: 309 AGSCCTSTPGKRWS----------PRCGSMARGCSTRPRRKSATAP---CSPDTCCSNNT 169
           +GS C  T   R            PRC +    C T P R   T P    +P TC    T
Sbjct: 19  SGSTCCKTEPPRCETEPPRCETEPPRCETEPPRCETEPPRCETTTPKCETTPPTC---RT 75

Query: 168 SPHHCK 151
            P  CK
Sbjct: 76  EPPTCK 81

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>MT1_TETTH (Q8T6B3) Metallothionein-1 (MT-1)|
          Length = 107

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 13/66 (19%)
 Frame = -3

Query: 300 CCTST-PGKRWSPR-----------CGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHH 157
           CCT T  G +W+             CG  A+ C T P   S     S    C ++T+   
Sbjct: 42  CCTGTGEGCKWTGCKCCQPAKSGCCCGDKAKACCTDP--NSGCCCSSKTNKCCDSTNKTE 99

Query: 156 CK-CRC 142
           CK C C
Sbjct: 100 CKTCEC 105

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>FATH_HUMAN (Q14517) Cadherin-related tumor suppressor homolog precursor (Protein|
            fat homolog)
          Length = 4590

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/59 (30%), Positives = 20/59 (33%)
 Frame = -3

Query: 324  CRTYLAGSCCTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKC 148
            C   L G+ C    G R   RC S    CS  P        C     C N    +HC C
Sbjct: 4106 CFDSLDGAVCQCDSGFR-GERCQSDIDECSGNP--------CLHGALCENTHGSYHCNC 4155

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>Y2081_STRCO (P45497) UPF0124 protein SCO2081|
          Length = 242

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 24/91 (26%), Positives = 29/91 (31%)
 Frame = -3

Query: 387 APWGSRPVRSSSRFATGIQRLCRTYLAGSCCTSTPGKRWSPRCGSMARGCSTRPRRKSAT 208
           APWG RPV       T  + L    L   C    P     P  G  A   + RP   +  
Sbjct: 77  APWGDRPVPRVDAVVTAERGLALAVLTADC---VPVLLADPVSGVAAAAHAGRPGLVAGV 133

Query: 207 APCSPDTCCSNNTSPHHCKCRCVIRTIGEIC 115
            P +          P     R V RT   +C
Sbjct: 134 VPAAVRAMAELGADP----ARIVARTGPAVC 160

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>SECY_LACLC (P27148) Preprotein translocase secY subunit|
          Length = 439

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
 Frame = -2

Query: 361 VIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDG------QRVQYQTKAKERDRAV 200
           +     +G P+A+++++    L+V P E  ++ ++V G        +   T  ++ +R V
Sbjct: 184 IFAGIVSGIPSAIKSVYDEKFLNVRPSEIPMSWIFVIGLILSAIVIIYVTTFVQQAERKV 243

Query: 199 LSGYVLLKQHIPSSL*VPL 143
              Y  L Q  P+S  +PL
Sbjct: 244 PIQYTKLTQGAPTSSYLPL 262

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>MUA3_CAEEL (P34576) Transmembrane cell adhesion receptor mua-3 precursor (Muscle|
            attachment abnormal protein 3)
          Length = 3767

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/67 (25%), Positives = 27/67 (40%)
 Frame = -3

Query: 345  ATGIQRLCRTYLAGSCCTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTS 166
            A G    CR+  A     S PG+     C +    CS + +       CS +  C++   
Sbjct: 883  AEGYTCQCRSGYADISPVSQPGRI----CRARVNECSNKEKYN---VDCSENAICADTEH 935

Query: 165  PHHCKCR 145
             + C+CR
Sbjct: 936  SYSCRCR 942

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>KRA98_HUMAN (Q9BYQ0) Keratin-associated protein 9-8 (Keratin-associated protein|
           9.8) (Ultrahigh sulfur keratin-associated protein 9.8)
          Length = 159

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/61 (26%), Positives = 19/61 (31%)
 Frame = -3

Query: 324 CRTYLAGSCCTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCR 145
           C      +CC +T  K  +    S    C       S   PC   TCC N      C   
Sbjct: 5   CSPCCQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCCQPICVTS 64

Query: 144 C 142
           C
Sbjct: 65  C 65

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>K1H2_HUMAN (Q14532) Keratin, type I cuticular Ha2 (Hair keratin, type I Ha2)|
          Length = 448

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 204 PCSPDTCCSNNTSPHHCKCRCVIRTIGEICS 112
           PCS  +C +   SP   +  CV RT+G  CS
Sbjct: 411 PCSTPSCTTCVPSPCVTRTVCVPRTVGMPCS 441

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>SPIKE_CVBV (P25194) Spike glycoprotein precursor (Peplomer protein) (E2)|
           [Contains: Spike protein S1 (90B); Spike protein S2
           (90A)]
          Length = 1363

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 201 CSPDTCCSNNTSPHHCKCRCVIRTIGEICS 112
           C+PD   S +T P+ C     +  IGE CS
Sbjct: 534 CTPDPITSKSTGPYKCPQTKYLVGIGEHCS 563

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>SPIKE_CVBQ (P25193) Spike glycoprotein precursor (Peplomer protein) (E2)|
           [Contains: Spike protein S1 (90B); Spike protein S2
           (90A)]
          Length = 1363

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 201 CSPDTCCSNNTSPHHCKCRCVIRTIGEICS 112
           C+PD   S +T P+ C     +  IGE CS
Sbjct: 534 CTPDPITSKSTGPYKCPQTKYLVGIGEHCS 563

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>SPIKE_CVBM (P15777) Spike glycoprotein precursor (Peplomer protein) (E2)|
           [Contains: Spike protein S1 (90B); Spike protein S2
           (90A)]
          Length = 1363

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 201 CSPDTCCSNNTSPHHCKCRCVIRTIGEICS 112
           C+PD   S +T P+ C     +  IGE CS
Sbjct: 534 CTPDPITSKSTGPYKCPQTKYLVGIGEHCS 563

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>SPIKE_CVBLY (P25192) Spike glycoprotein precursor (Peplomer protein) (E2)|
           [Contains: Spike protein S1 (90B); Spike protein S2
           (90A)]
          Length = 1363

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 201 CSPDTCCSNNTSPHHCKCRCVIRTIGEICS 112
           C+PD   S +T P+ C     +  IGE CS
Sbjct: 534 CTPDPITSKSTGPYKCPQTKYLVGIGEHCS 563

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>SPIKE_CVBL9 (P25191) Spike glycoprotein precursor (Peplomer protein) (E2)|
           [Contains: Spike protein S1 (90B); Spike protein S2
           (90A)]
          Length = 1363

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 201 CSPDTCCSNNTSPHHCKCRCVIRTIGEICS 112
           C+PD   S +T P+ C     +  IGE CS
Sbjct: 534 CTPDPITSKSTGPYKCPQTKYLVGIGEHCS 563

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>SPIKE_CVBF (P25190) Spike glycoprotein precursor (Peplomer protein) (E2)|
           [Contains: Spike protein S1 (90B); Spike protein S2
           (90A)]
          Length = 1363

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 201 CSPDTCCSNNTSPHHCKCRCVIRTIGEICS 112
           C+PD   S +T P+ C     +  IGE CS
Sbjct: 534 CTPDPITSKSTGPYKCPQTKYLVGIGEHCS 563

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>EMR3_HUMAN (Q9BY15) EGF-like module-containing mucin-like hormone|
           receptor-like 3 precursor (EGF-like module-containing
           mucin-like receptor EMR3)
          Length = 652

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 225 RRKSATAPCSPDTCCSNNTSPHHCKC 148
           + K++ A C P+  C NNT   HC C
Sbjct: 23  KTKTSCAKCPPNASCVNNT---HCTC 45

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>AGRN_RAT (P25304) Agrin precursor|
          Length = 1959

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/71 (26%), Positives = 22/71 (30%)
 Frame = -3

Query: 327  LCRTYLAGSCCTSTPGKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKC 148
            LC+   AG      P  R+ P C      C   P      APC          S    KC
Sbjct: 1454 LCQALEAGMFLCQCPPGRFGPTCADEKSPCQPNPCH--GAAPC-------RVLSSGGAKC 1504

Query: 147  RCVIRTIGEIC 115
             C +   G  C
Sbjct: 1505 ECPLGRSGTFC 1515

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>ESXM_MYCBO (P59805) ESAT-6-like protein esxM|
          Length = 98

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 337 DPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRV 239
           DP A++++ GRF +H    E     MW   Q +
Sbjct: 8   DPHAMRDMAGRFEVHAQTVEDEARRMWASAQNI 40

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>ESXK_MYCTU (O05299) ESAT-6-like protein esxK|
          Length = 98

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 337 DPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRV 239
           DP A++++ GRF +H    E     MW   Q +
Sbjct: 8   DPHAMRDMAGRFEVHAQTVEDEARRMWASAQNI 40

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>ESXJ_MYCTU (P96363) ESAT-6-like protein esxJ|
          Length = 98

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 337 DPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRV 239
           DP A++++ GRF +H    E     MW   Q +
Sbjct: 8   DPHAMRDMAGRFEVHAQTVEDEARRMWASAQNI 40

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>ESXJ_MYCBO (P59803) ESAT-6-like protein esxJ/esxK|
          Length = 98

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 337 DPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRV 239
           DP A++++ GRF +H    E     MW   Q +
Sbjct: 8   DPHAMRDMAGRFEVHAQTVEDEARRMWASAQNI 40

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>ES6LA_MYCTU (O07932) Putative ESAT-6-like protein 10|
          Length = 98

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 337 DPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRV 239
           DP A++++ GRF +H    E     MW   Q +
Sbjct: 8   DPHAMRDMAGRFEVHAQTVEDEARRMWASAQNI 40

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>ES6L7_MYCTU (P95243) Putative ESAT-6-like protein 7|
          Length = 98

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 337 DPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRV 239
           DP A++++ GRF +H    E     MW   Q +
Sbjct: 8   DPHAMRDMAGRFEVHAQTVEDEARRMWASAQNI 40

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>TPN1_YEAST (P53099) Vitamin B6 transporter TPN1 (Transport of pyridoxine|
           protein 1)
          Length = 579

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = -2

Query: 316 IFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAVLSGYVLLKQHIPSSL*VPLCH 137
           +F RF LH+Y  E       ++G  +   +K  E+D AV + ++L ++H  +       H
Sbjct: 447 VFRRFFLHLYTKEFPTVTGEINGPELVGSSKEVEKD-AVTNIHLLKRKHKVTK------H 499

Query: 136 TYYW 125
            Y W
Sbjct: 500 RYNW 503

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>TPN1_SACPS (Q874L4) Vitamin B6 transporter TPN1 (Transport of pyridoxine|
           protein 1)
          Length = 579

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = -2

Query: 316 IFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAVLSGYVLLKQHIPSSL*VPLCH 137
           +F RF LH+Y  E       ++G  +   +K  E+D AV + ++L ++H  +       H
Sbjct: 447 VFRRFFLHLYTKEFPTVTGEINGPELVGSSKEVEKD-AVTNIHLLKRKHKVTK------H 499

Query: 136 TYYW 125
            Y W
Sbjct: 500 RYNW 503

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>LAMB2_RAT (P15800) Laminin beta-2 chain precursor (S-laminin) (Laminin chain|
           B3)
          Length = 1801

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 201 CSPDTCCSNNTSPHHCKCRCVIRTIGEIC 115
           C P    S+  +PH  +CRC    +G  C
Sbjct: 788 CDPQGSLSSECNPHGGQCRCKPGVVGRRC 816

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>LAP4_MOUSE (Q80U72) LAP4 protein (Scribble homolog protein)|
          Length = 1612

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 267  PRCGSMARGCSTRPRRKSATAPCSP 193
            P  GS+ RG S     K+  APCSP
Sbjct: 1261 PSAGSLQRGPSATTGGKTTEAPCSP 1285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,980,697
Number of Sequences: 219361
Number of extensions: 1297451
Number of successful extensions: 4186
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 3781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4170
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result