Clone Name | rbart46d03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_472588.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 69.9 bits (35), Expect = 7e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 124 tgagcagcttgagcagtgccatggcgttggccttggccctggggctgcactggctctgcg 183 |||||||||||||||| | | |||| |||||||| ||||||| || ||||||||||||| Sbjct: 1270 tgagcagcttgagcagagacctggccttggccttcgccctggcgccgcactggctctgca 1211 Query: 184 gcaacagaagcagccgcgt 202 ||| ||| |||||| |||| Sbjct: 1210 gcagcagcagcagcagcgt 1192 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 259 ccagcagcgacgccatggcgtgctcgctgccg 290 ||||||||| ||||| ||||||||||||||| Sbjct: 1135 ccagcagcgccgccaccgcgtgctcgctgccg 1104
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 69.9 bits (35), Expect = 7e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 124 tgagcagcttgagcagtgccatggcgttggccttggccctggggctgcactggctctgcg 183 |||||||||||||||| | | |||| |||||||| ||||||| || ||||||||||||| Sbjct: 21755771 tgagcagcttgagcagagacctggccttggccttcgccctggcgccgcactggctctgca 21755712 Query: 184 gcaacagaagcagccgcgt 202 ||| ||| |||||| |||| Sbjct: 21755711 gcagcagcagcagcagcgt 21755693 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 34266362 cgctgccgctgccgccgccgcc 34266341 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgccc 305 |||||||||| ||||||||||||| Sbjct: 23160820 tcgctgccgccgccgccgccgccc 23160797 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 259 ccagcagcgacgccatggcgtgctcgctgccg 290 ||||||||| ||||| ||||||||||||||| Sbjct: 21755636 ccagcagcgccgccaccgcgtgctcgctgccg 21755605
>dbj|AK121647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058N21, full insert sequence Length = 1800 Score = 69.9 bits (35), Expect = 7e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 124 tgagcagcttgagcagtgccatggcgttggccttggccctggggctgcactggctctgcg 183 |||||||||||||||| | | |||| |||||||| ||||||| || ||||||||||||| Sbjct: 1670 tgagcagcttgagcagagacctggccttggccttcgccctggcgccgcactggctctgca 1611 Query: 184 gcaacagaagcagccgcgt 202 ||| ||| |||||| |||| Sbjct: 1610 gcagcagcagcagcagcgt 1592 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 259 ccagcagcgacgccatggcgtgctcgctgccg 290 ||||||||| ||||| ||||||||||||||| Sbjct: 1535 ccagcagcgccgccaccgcgtgctcgctgccg 1504
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 69.9 bits (35), Expect = 7e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 124 tgagcagcttgagcagtgccatggcgttggccttggccctggggctgcactggctctgcg 183 |||||||||||||||| | | |||| |||||||| ||||||| || ||||||||||||| Sbjct: 67388 tgagcagcttgagcagagacctggccttggccttcgccctggcgccgcactggctctgca 67329 Query: 184 gcaacagaagcagccgcgt 202 ||| ||| |||||| |||| Sbjct: 67328 gcagcagcagcagcagcgt 67310 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 259 ccagcagcgacgccatggcgtgctcgctgccg 290 ||||||||| ||||| ||||||||||||||| Sbjct: 67253 ccagcagcgccgccaccgcgtgctcgctgccg 67222
>emb|AL355802.13| Human DNA sequence from clone RP3-337H4 on chromosome 6 Contains the 3' part of a novel gene, three novel genes, the gene for RNA polymerase I 40 kDa subunit (RPA40) (RPA39), the gene for exportin 5 (KIAA1291) (XPO5), a 40S ribosomal protein S2 (RPS2) pseudogene, the 5' part of the POLH gene for DNA directed polymerase eta and four CpG islands, complete sequence Length = 105935 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 280 gctcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||||| Sbjct: 22941 gctcgctgccgctgccgccgccgcc 22917
>emb|CR626442.1| full-length cDNA clone CS0DF029YJ02 of Fetal brain of Homo sapiens (human) Length = 1659 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 280 gctcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||||| Sbjct: 89 gctcgctgccgctgccgccgccgcc 113
>ref|NM_001012974.1| Homo sapiens chromosome 6 open reading frame 154 (C6orf154), mRNA Length = 2121 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 280 gctcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||||| Sbjct: 503 gctcgctgccgctgccgccgccgcc 527
>gb|BC108661.1| Homo sapiens chromosome 6 open reading frame 154, mRNA (cDNA clone MGC:131686 IMAGE:5240367), complete cds Length = 1805 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 280 gctcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||||| Sbjct: 160 gctcgctgccgctgccgccgccgcc 184
>ref|XM_549823.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1018 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 20 ctcgctgccgctgccgccgccgcc 43
>gb|AY023139.1| Oryza sativa microsatellite MRG5464 containing (GCC)X8, genomic sequence Length = 224 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 89 ctcgctgccgctgccgccgccgcc 112
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 23256598 ctcgctgccgctgccgccgccgcc 23256621 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 8557185 cgctgccgctgccgccgccgcc 8557206 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgc 303 ||||||||||||||||||||| Sbjct: 34367318 cgctgccgctgccgccgccgc 34367298 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ctgccgctgccgccgccgcc 304 |||||||||||||||||||| Sbjct: 23515523 ctgccgctgccgccgccgcc 23515542
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 172125 ctcgctgccgctgccgccgccgcc 172102 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgccc 305 ||||||||||||||||||||||| Sbjct: 38689840 cgctgccgctgccgccgccgccc 38689862 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 29384350 cgctgccgctgccgccgccgcc 29384329 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 gctgccgctgccgccgccgcc 304 ||||||||||||||||||||| Sbjct: 5867387 gctgccgctgccgccgccgcc 5867407 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccg 302 |||||||||||||||||||| Sbjct: 28829062 cgctgccgctgccgccgccg 28829043 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ctgccgctgccgccgccgcc 304 |||||||||||||||||||| Sbjct: 17887853 ctgccgctgccgccgccgcc 17887872 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gctgccgctgccgccgccgc 303 |||||||||||||||||||| Sbjct: 6470840 gctgccgctgccgccgccgc 6470859 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccg 302 |||||||||||||||||||| Sbjct: 5506942 cgctgccgctgccgccgccg 5506961 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||| ||||||||||| Sbjct: 4572175 ctcgctgccgcttccgccgccgcc 4572152
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 169927 ctcgctgccgctgccgccgccgcc 169904
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 13795 ctcgctgccgctgccgccgccgcc 13772
>dbj|AP005384.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_D02 Length = 112773 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 15744 ctcgctgccgctgccgccgccgcc 15767
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 113829 ctcgctgccgctgccgccgccgcc 113852
>dbj|AK108287.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-D09, full insert sequence Length = 1018 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 20 ctcgctgccgctgccgccgccgcc 43
>dbj|AK072807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140E08, full insert sequence Length = 2409 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 15 ctcgctgccgctgccgccgccgcc 38
>dbj|AK068676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158I15, full insert sequence Length = 845 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 536 ctcgctgccgctgccgccgccgcc 513
>dbj|AK066123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055A22, full insert sequence Length = 2498 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 541 ctcgctgccgctgccgccgccgcc 518
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 281 ctcgctgccgctgccgccgccgcc 304 |||||||||||||||||||||||| Sbjct: 120671 ctcgctgccgctgccgccgccgcc 120648
>gb|DQ235090.1| Cricetulus griseus external transcribed spacer, 18S ribosomal RNA gene, internal transcribed spacer 1, and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 15029 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcccaccc 309 |||||||||||||||||||| |||||| Sbjct: 6075 cgctgccgctgccgccgccgaccaccc 6049
>ref|NM_197136.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0051D19.27), mRNA Length = 1956 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 668 tcgctgccgctgccgccgccgcc 646
>ref|NM_190217.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgccc 305 ||||||||||||||||||||||| Sbjct: 39 cgctgccgctgccgccgccgccc 17
>gb|AF307776.1| Homo sapiens beta-1 adrenergic receptor gene, 5' UTR and partial cds Length = 3113 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 2933 tcgctgccgctgccgccgccgcc 2911
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 65813 tcgctgccgctgccgccgccgcc 65791
>ref|XM_580720.2| PREDICTED: Bos taurus similar to zinc finger, matrin type 1 isoform 1 (LOC504576), partial mRNA Length = 2361 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 184 tcgctgccgctgccgccgccgcc 162
>ref|NM_026988.1| Mus musculus RIKEN cDNA 2610009E16 gene (2610009E16Rik), mRNA Length = 1184 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 207 tcgctgccgctgccgccgccgcc 229
>gb|AC137901.7| Mus musculus chromosome 6, clone RP23-81E17, complete sequence Length = 158419 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 32440 tcgctgccgctgccgccgccgcc 32462
>gb|AY567837.1| Homo sapiens adrenergic, beta-1-, receptor (ADRB1) gene, complete cds Length = 16612 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 7540 tcgctgccgctgccgccgccgcc 7518
>ref|XM_534925.2| PREDICTED: Canis familiaris similar to WNK lysine deficient protein kinase 1, transcript variant 1 (LOC477728), mRNA Length = 2397 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgccc 305 ||||||||||||||||||||||| Sbjct: 462 cgctgccgctgccgccgccgccc 484
>ref|XM_848867.1| PREDICTED: Canis familiaris similar to WNK lysine deficient protein kinase 1, transcript variant 2 (LOC477728), mRNA Length = 7228 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgccc 305 ||||||||||||||||||||||| Sbjct: 462 cgctgccgctgccgccgccgccc 484
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 30049 tcgctgccgctgccgccgccgcc 30071
>gb|AC110233.9| Mus musculus chromosome 6, clone RP23-68H1, complete sequence Length = 151295 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgccc 305 ||||||||||||||||||||||| Sbjct: 53170 cgctgccgctgccgccgccgccc 53192
>gb|AC164563.4| Mus musculus BAC clone RP23-130D15 from chromosome 6, complete sequence Length = 202948 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 93988 tcgctgccgctgccgccgccgcc 93966
>emb|X99973.1|HVMYB4TRF H.vulgare mRNA for myb4 transcription factor Length = 1180 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgccc 305 ||||||||||||||||||||||| Sbjct: 816 cgctgccgctgccgccgccgccc 794
>gb|BC045633.1| Homo sapiens cDNA clone IMAGE:5284411 Length = 3830 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 790 tcgctgccgctgccgccgccgcc 812
>ref|NM_175312.2| Mus musculus RIKEN cDNA B630005N14 gene (B630005N14Rik), mRNA Length = 3880 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgccc 305 ||||||||||||||||||||||| Sbjct: 117 cgctgccgctgccgccgccgccc 95
>dbj|AK170526.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630106M02 product:hypothetical protein, full insert sequence Length = 4463 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgccc 305 ||||||||||||||||||||||| Sbjct: 89 cgctgccgctgccgccgccgccc 67
>dbj|AK046745.1| Mus musculus 4 days neonate thymus cDNA, RIKEN full-length enriched library, clone:B630005N14 product:CDNA FLJ31818 FIS, CLONE NT2RP6000017 homolog [Homo sapiens], full insert sequence Length = 3880 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgccc 305 ||||||||||||||||||||||| Sbjct: 117 cgctgccgctgccgccgccgccc 95
>dbj|AK011360.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610009E16 product:PARATHYMOSIN (ZINC-BINDING 11.5 KDA PROTEIN) homolog [Rattus norvegicus], full insert sequence Length = 1148 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 222 tcgctgccgctgccgccgccgcc 244
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 18183079 tcgctgccgctgccgccgccgcc 18183057 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgc 303 ||||||||||||||||||||| Sbjct: 16969145 cgctgccgctgccgccgccgc 16969165 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccg 302 |||||||||||||||||||| Sbjct: 4941722 cgctgccgctgccgccgccg 4941703
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 27701255 tcgctgccgctgccgccgccgcc 27701233 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcccacc 308 ||||||||| |||||||||||||||| Sbjct: 22320764 cgctgccgccgccgccgccgcccacc 22320739 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 278 gtgctcgctgccgctgccgccgccg 302 |||||||| |||||||||||||||| Sbjct: 20164942 gtgctcgccgccgctgccgccgccg 20164918 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgc 303 ||||||||||||||||||||| Sbjct: 5960100 cgctgccgctgccgccgccgc 5960080 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gctgccgctgccgccgccgc 303 |||||||||||||||||||| Sbjct: 24091960 gctgccgctgccgccgccgc 24091941 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccg 302 |||||||||||||||||||| Sbjct: 22659593 cgctgccgctgccgccgccg 22659612 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ctgccgctgccgccgccgcc 304 |||||||||||||||||||| Sbjct: 21858875 ctgccgctgccgccgccgcc 21858856 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccg 302 |||||||||||||||||||| Sbjct: 6822266 cgctgccgctgccgccgccg 6822247
>gb|BC052699.1| Mus musculus RIKEN cDNA 2610009E16 gene, mRNA (cDNA clone MGC:64697 IMAGE:5715702), complete cds Length = 1184 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 207 tcgctgccgctgccgccgccgcc 229
>gb|AF272889.1|AF272889 Homo sapiens beta-1 adrenergic receptor gene, promoter region Length = 3117 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 2939 tcgctgccgctgccgccgccgcc 2917
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgccc 305 ||||||||||||||||||||||| Sbjct: 147813 cgctgccgctgccgccgccgccc 147835
>ref|XM_308726.2| Anopheles gambiae str. PEST ENSANGP00000015066 (ENSANGG00000012577), mRNA Length = 1824 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 279 tgctcgctgccgctgccgccgccgccc 305 ||||||||||||| ||||||||||||| Sbjct: 1542 tgctcgctgccgccgccgccgccgccc 1516
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 142 ccatggcgttggccttggccctg 164 ||||||||||||||||||||||| Sbjct: 5056657 ccatggcgttggccttggccctg 5056679 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 gggcccacggcgcgcatgaaggtg 459 |||||||||||||||| ||||||| Sbjct: 20335 gggcccacggcgcgcaggaaggtg 20358
>gb|AC005886.2|AC005886 b240g16, complete sequence Length = 134011 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 26054 tcgctgccgctgccgccgccgcc 26076
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 18192332 tcgctgccgctgccgccgccgcc 18192310 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgc 303 ||||||||||||||||||||| Sbjct: 16978185 cgctgccgctgccgccgccgc 16978205 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccg 302 |||||||||||||||||||| Sbjct: 4942509 cgctgccgctgccgccgccg 4942490
>emb|AL355543.13| Human DNA sequence from clone RP11-86E10 on chromosome 10 Contains the ADRB1 gene for adrenergic beta-1- receptor, a ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1) pseudogene, the gene for CTCL tumor antigen L14-2 (FLJ10188 DKFZp762M1412 FLJ32946 FLJ37179 FLJ21086 FLJ32946 FLJ35301), the 5' end of the TDRD1 gene for tudor domain containing 1 and three CpG islands, complete sequence Length = 179009 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 35907 tcgctgccgctgccgccgccgcc 35885
>gb|AC142254.4| Mus musculus BAC clone RP24-545G7 from 6, complete sequence Length = 159818 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 16319 tcgctgccgctgccgccgccgcc 16341
>gb|BC088119.1| Rattus norvegicus vesicle-associated membrane protein 3, mRNA (cDNA clone MGC:108618 IMAGE:7366421), complete cds Length = 1705 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 tcgctgccgctgccgccgccgcc 304 ||||||||||||||||||||||| Sbjct: 26 tcgctgccgctgccgccgccgcc 48
>gb|BC085127.1| Mus musculus hepatitis B virus x associated protein, mRNA (cDNA clone MGC:90806 IMAGE:6853428), complete cds Length = 5772 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 51 cgctgccgctgccgccgccgcc 30
>gb|AY308814.1| Canis familiaris homeobox A11 gene, partial sequence Length = 383 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 170 cgctgccgctgccgccgccgcc 149
>gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosome 16, complete sequence Length = 197843 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 109072 cgctgccgctgccgccgccgcc 109051
>ref|XM_474300.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1173 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 668 cgctgccgctgccgccgccgcc 689
>ref|XM_469883.1| Oryza sativa (japonica cultivar-group), mRNA Length = 933 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 304 cgctgccgctgccgccgccgcc 283
>ref|XM_464852.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1176 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 78 cgctgccgctgccgccgccgcc 57
>ref|XM_506764.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1113_G05.32 mRNA Length = 1265 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 77 cgctgccgctgccgccgccgcc 56
>ref|XM_469661.1| Oryza sativa (japonica cultivar-group), mRNA Length = 627 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 177 cgctgccgctgccgccgccgcc 156
>gb|BT019686.1| Synthetic construct Homo sapiens insulin-like growth factor binding protein 2, 36kDa mRNA, partial cds Length = 987 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 26 cgctgccgctgccgccgccgcc 47
>gb|BT017885.1| Zea mays clone EL01N0514G02.c mRNA sequence Length = 870 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 225 cgctgccgctgccgccgccgcc 246
>gb|BC059885.1| Mus musculus amine oxidase (flavin containing) domain 2, mRNA (cDNA clone MGC:69806 IMAGE:6815975), complete cds Length = 2999 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 167 cgctgccgctgccgccgccgcc 146
>gb|AF405606.1| Homo sapiens insulin-stimulated protein kinase 1 (RPS6KA3) gene, partial cds Length = 671 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 317 cgctgccgctgccgccgccgcc 338
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcccacc 308 ||||||||| |||||||||||||||| Sbjct: 22399 cgctgccgccgccgccgccgcccacc 22374
>gb|AY591908.1| Mus musculus SP9 mRNA, complete cds Length = 2380 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1559 cgctgccgctgccgccgccgcc 1538
>ref|XM_588940.2| PREDICTED: Bos taurus transient receptor potential cation channel, subfamily C, member 3 (TRPC3), mRNA Length = 3942 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 134 cgctgccgctgccgccgccgcc 155
>ref|XM_599430.2| PREDICTED: Bos taurus similar to CG2698-PA (LOC521172), mRNA Length = 2898 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 286 cgctgccgctgccgccgccgcc 265
>ref|XM_607313.2| PREDICTED: Bos taurus similar to Orphan nuclear receptor NR4A3 (Nuclear hormone receptor NOR-1) (Neuron-derived orphan receptor 1) (Mitogen induced nuclear orphan receptor) (LOC528877), mRNA Length = 1872 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 876 cgctgccgctgccgccgccgcc 897
>ref|XM_424176.1| PREDICTED: Gallus gallus similar to Ribonucleases P/MRP protein subunit POP1 (hPOP1) (LOC426537), partial mRNA Length = 1443 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 230 cgctgccgctgccgccgccgcc 209
>ref|XM_416882.1| PREDICTED: Gallus gallus similar to ubiquitin protein ligase E3A isoform 3; human papilloma virus E6-associated protein; oncogenic protein-associated protein E6-AP; CTCL tumor antigen se37-2 (LOC418686), mRNA Length = 3627 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 166 cgctgccgctgccgccgccgcc 145 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 280 gctcgctgccgctgccgccgccgcc 304 |||||||||||||||||| |||||| Sbjct: 175 gctcgctgccgctgccgctgccgcc 151
>ref|XM_870160.1| PREDICTED: Bos taurus similar to WT1-interacting protein (LOC617834), partial mRNA Length = 1743 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 904 cgctgccgctgccgccgccgcc 883
>gb|BC069197.1| Homo sapiens autocrine motility factor receptor, transcript variant 1, mRNA (cDNA clone MGC:78441 IMAGE:6650026), complete cds Length = 3091 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 112 cgctgccgctgccgccgccgcc 91
>gb|BC033694.1| Homo sapiens BCL2-like 11 (apoptosis facilitator), transcript variant 1, mRNA (cDNA clone MGC:45206 IMAGE:5213713), complete cds Length = 3679 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 48 cgctgccgctgccgccgccgcc 69
>gb|BC004312.1| Homo sapiens insulin-like growth factor binding protein 2, 36kDa, mRNA (cDNA clone MGC:10918 IMAGE:3627826), complete cds Length = 1440 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 120 cgctgccgctgccgccgccgcc 141
>gb|BC004457.1| Homo sapiens ankyrin repeat and KH domain containing 1, transcript variant 3, mRNA (cDNA clone IMAGE:2819955), complete cds Length = 2139 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 298 cgctgccgctgccgccgccgcc 277
>gb|BC012769.1| Homo sapiens insulin-like growth factor binding protein 2, 36kDa, mRNA (cDNA clone MGC:16256 IMAGE:3689990), complete cds Length = 1428 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 120 cgctgccgctgccgccgccgcc 141
>gb|BC017199.2| Homo sapiens paired-like homeobox 2b, mRNA (cDNA clone MGC:1678 IMAGE:3161284), complete cds Length = 1497 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 867 cgctgccgctgccgccgccgcc 846
>gb|BC068553.1| Homo sapiens down-regulator of transcription 1, TBP-binding (negative cofactor 2), mRNA (cDNA clone MGC:87462 IMAGE:4822070), complete cds Length = 1624 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 282 cgctgccgctgccgccgccgcc 261
>ref|XM_959619.1| Neurospora crassa OR74A hypothetical protein (NCU00551.1) partial mRNA Length = 7194 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 7054 cgctgccgctgccgccgccgcc 7033 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgccca 306 ||||||||| |||||||||||||| Sbjct: 7048 cgctgccgccgccgccgccgccca 7025
>ref|XM_324730.1| Neurospora crassa OR74A hypothetical protein (NCU00551.1) partial mRNA Length = 7194 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 7054 cgctgccgctgccgccgccgcc 7033 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgccca 306 ||||||||| |||||||||||||| Sbjct: 7048 cgctgccgccgccgccgccgccca 7025
>ref|NM_000597.2| Homo sapiens insulin-like growth factor binding protein 2, 36kDa (IGFBP2), mRNA Length = 1439 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 146 cgctgccgctgccgccgccgcc 167
>ref|NM_001003658.2| Bos taurus EIF5A protein (EIF5A), mRNA Length = 1273 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 48 cgctgccgctgccgccgccgcc 27
>ref|NM_001110.2| Homo sapiens ADAM metallopeptidase domain 10 (ADAM10), mRNA Length = 3927 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 440 cgctgccgctgccgccgccgcc 419
>ref|NM_016686.2| Mus musculus vascular endothelial zinc finger 1 (Vezf1), mRNA Length = 4578 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 16 cgctgccgctgccgccgccgcc 37
>gb|AY601816.1| Homo sapiens BCL-2-interacting mediator of cell death (BCL2L11) gene, promoter region and 5' UTR Length = 600 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 361 cgctgccgctgccgccgccgcc 382
>gb|AC122302.4| Mus musculus BAC clone RP23-276E10 from chromosome 12, complete sequence Length = 172985 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 36144 cgctgccgctgccgccgccgcc 36123
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 31306637 cgctgccgctgccgccgccgcc 31306616 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 30063786 cgctgccgctgccgccgccgcc 30063807 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gctgccgctgccgccgccgcc 304 ||||||||||||||||||||| Sbjct: 35449862 gctgccgctgccgccgccgcc 35449842 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgc 303 ||||||||||||||||||||| Sbjct: 32310204 cgctgccgctgccgccgccgc 32310224 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgc 303 ||||||||||||||||||||| Sbjct: 27525273 cgctgccgctgccgccgccgc 27525253 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 ctcgctgccgctgccgccgccgcc 304 ||||| |||||||||||||||||| Sbjct: 15464998 ctcgccgccgctgccgccgccgcc 15465021
>ref|XM_205287.5| PREDICTED: Mus musculus protocadherin 19 (Pcdh19), mRNA Length = 6138 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 561 cgctgccgctgccgccgccgcc 540
>gb|AC183664.3| Pan troglodytes BAC clone CH251-645D10 from chromosome 12, complete sequence Length = 176676 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 105750 cgctgccgctgccgccgccgcc 105729
>ref|XM_912729.2| PREDICTED: Mus musculus gene model 920, (NCBI) (Gm920), mRNA Length = 6945 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 2241 cgctgccgctgccgccgccgcc 2220
>ref|XM_918938.2| PREDICTED: Mus musculus hepatitis B virus x associated protein, transcript variant 12 (Hbxap), mRNA Length = 5146 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 59 cgctgccgctgccgccgccgcc 38
>ref|XM_983991.1| PREDICTED: Mus musculus SRY-box containing gene 30 (Sox30), mRNA Length = 2196 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 567 cgctgccgctgccgccgccgcc 588
>ref|XM_986928.1| PREDICTED: Mus musculus hepatitis B virus x associated protein, transcript variant 1 (Hbxap), mRNA Length = 3116 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 66 cgctgccgctgccgccgccgcc 45
>ref|XM_986963.1| PREDICTED: Mus musculus hepatitis B virus x associated protein, transcript variant 2 (Hbxap), mRNA Length = 5148 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 59 cgctgccgctgccgccgccgcc 38
>ref|XM_897133.2| PREDICTED: Mus musculus hepatitis B virus x associated protein, transcript variant 6 (Hbxap), mRNA Length = 3107 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 57 cgctgccgctgccgccgccgcc 36
>ref|XM_620529.3| PREDICTED: Mus musculus hepatitis B virus x associated protein, transcript variant 1 (Hbxap), mRNA Length = 5139 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 50 cgctgccgctgccgccgccgcc 29
>ref|XM_977082.1| PREDICTED: Mus musculus PR domain containing 13, transcript variant 1 (Prdm13), mRNA Length = 3458 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1880 cgctgccgctgccgccgccgcc 1859
>ref|XM_977119.1| PREDICTED: Mus musculus PR domain containing 13, transcript variant 2 (Prdm13), mRNA Length = 3108 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1530 cgctgccgctgccgccgccgcc 1509
>ref|XM_920394.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 4 (Prdm13), mRNA Length = 3476 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1898 cgctgccgctgccgccgccgcc 1877
>ref|XM_907402.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 3 (Prdm13), mRNA Length = 3126 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1548 cgctgccgctgccgccgccgcc 1527
>ref|XM_131309.6| PREDICTED: Mus musculus PR domain containing 13, transcript variant 1 (Prdm13), mRNA Length = 3458 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1880 cgctgccgctgccgccgccgcc 1859
>ref|XM_884367.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 2 (Prdm13), mRNA Length = 3108 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1530 cgctgccgctgccgccgccgcc 1509
>ref|XM_994102.1| PREDICTED: Mus musculus trans-acting transcription factor 9 (Sp9), mRNA Length = 1539 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1488 cgctgccgctgccgccgccgcc 1467
>ref|XM_130764.7| PREDICTED: Mus musculus TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 1 (Taf4a), mRNA Length = 4422 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 792 cgctgccgctgccgccgccgcc 813
>gb|AC092140.4| Homo sapiens chromosome 16 clone RP11-413H22, complete sequence Length = 193188 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 118958 cgctgccgctgccgccgccgcc 118979
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 160109 cgctgccgctgccgccgccgcc 160088
>gb|AF521883.1| Homo sapiens multiple ankyrin repeats single KH domain protein isoform 2 mRNA, complete cds, alternatively spliced Length = 8246 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 259 cgctgccgctgccgccgccgcc 238
>gb|AF521882.1| Homo sapiens multiple ankyrin repeats single KH domain protein isoform 1 mRNA, complete cds, alternatively spliced Length = 8120 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 259 cgctgccgctgccgccgccgcc 238
>ref|XM_845722.1| PREDICTED: Canis familiaris similar to CG4813-PA, transcript variant 1 (LOC612846), mRNA Length = 3021 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 111 cgctgccgctgccgccgccgcc 132
>ref|XM_857257.1| PREDICTED: Canis familiaris similar to CG4813-PA, transcript variant 2 (LOC612846), mRNA Length = 1022 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 111 cgctgccgctgccgccgccgcc 132
>gb|AC099057.3| Homo sapiens chromosome 3 clone RP11-655N11, complete sequence Length = 164323 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 17295 cgctgccgctgccgccgccgcc 17274
>gb|BC017632.1| Mus musculus PR domain containing 13, mRNA (cDNA clone IMAGE:4507465), containing frame-shift errors Length = 3271 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1880 cgctgccgctgccgccgccgcc 1859
>gb|AC125526.4| Mus musculus BAC clone RP24-498L21 from chromosome 15, complete sequence Length = 178670 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 164821 cgctgccgctgccgccgccgcc 164842
>ref|XM_846834.1| PREDICTED: Canis familiaris similar to CG11412-PA, isoform A, transcript variant 1 (LOC612880), mRNA Length = 2277 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 181 cgctgccgctgccgccgccgcc 160
>gb|AC124541.4| Mus musculus BAC clone RP23-257F7 from 7, complete sequence Length = 145556 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 46974 cgctgccgctgccgccgccgcc 46995
>ref|NM_003924.2| Homo sapiens paired-like homeobox 2b (PHOX2B), mRNA Length = 3029 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1131 cgctgccgctgccgccgccgcc 1110
>ref|XM_844080.1| PREDICTED: Canis familiaris similar to fibrosin 1 (LOC607426), mRNA Length = 2529 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 2103 cgctgccgctgccgccgccgcc 2124
>gb|AY398667.1| Homo sapiens insulin-like growth factor binding protein 2, 36kDa (IGFBP2) gene, complete cds Length = 34956 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 2140 cgctgccgctgccgccgccgcc 2161
>gb|BC007054.1| Homo sapiens TBC1 domain family, member 7, mRNA (cDNA clone MGC:12476 IMAGE:3828592), complete cds Length = 1156 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 34 cgctgccgctgccgccgccgcc 13
>ref|NM_001938.2| Homo sapiens down-regulator of transcription 1, TBP-binding (negative cofactor 2) (DR1), mRNA Length = 3222 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 283 cgctgccgctgccgccgccgcc 262
>emb|AL929302.16| Human DNA sequence from clone RP11-716A19 on chromosome X Contains the 3' end of the CXorf15 gene for chromosome X open reading frame 15, the RBBP7 gene for retinoblastoma binding protein 7, the 5' end of the REPS2 gene for RALBP1 associated Eps domain containing 2, a novel pseudogene and four CpG islands, complete sequence Length = 172614 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 136579 cgctgccgctgccgccgccgcc 136558
>emb|AL807772.12| Human DNA sequence from clone RP11-188G3 on chromosome X Contains the 5' end of the RPS6KA3 gene for ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RSK, HU-2, HU-3, RSK2, MRX19, ISPK-1, MAPKAPK1B) and a CpG island, complete sequence Length = 129996 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 107776 cgctgccgctgccgccgccgcc 107755
>gb|BC055087.1| Homo sapiens ADAM metallopeptidase domain 10, mRNA (cDNA clone IMAGE:4698521) Length = 895 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 60 cgctgccgctgccgccgccgcc 39
>gb|BC104659.1| Homo sapiens ADAM metallopeptidase domain 10, mRNA (cDNA clone IMAGE:4657963) Length = 890 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 60 cgctgccgctgccgccgccgcc 39
>emb|AL590431.11| Human DNA sequence from clone RP11-205M9 on chromosome 1 Contains the 5' end of the gene for nuclear pore membrane glycoprotein 210-like (LOC91181), the TPM3 gene for tropomyosin 3, a novel gene, the gene for NICE-3 protein (NICE-3), the gene for NICE-4 protein (NICE-4) and a CpG island, complete sequence Length = 119460 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 68423 cgctgccgctgccgccgccgcc 68402
>emb|AL589984.7| Human DNA sequence from clone RP1-49A18 on chromosome 6 Contains a novel gene (HSPC239), the 3' end of a novel gene (FLJ20330, FLJ30569, FLJ23357) and two CpG islands, complete sequence Length = 84388 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 25474 cgctgccgctgccgccgccgcc 25495
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 140 tgccatggcgttggccttggcc 161 |||||||||||||||||||||| Sbjct: 459047 tgccatggcgttggccttggcc 459026
>emb|AL359710.15| Human DNA sequence from clone RP11-30L7 on chromosome 9 Contains part of a novel gene, the 5' end of the NR4A3 gene for nuclear receptor subfamily 4 group A, member 3 and two CpG islands, complete sequence Length = 174140 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 156795 cgctgccgctgccgccgccgcc 156774
>emb|AL159168.15| Human DNA sequence from clone RP11-401H23 on chromosome 9 Contains a the 3' end of a novel gene (KIAA0368), the gene for KIAA1962 protein similar to zinc finger protein HIT-10 and a CpG island, complete sequence Length = 129010 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 55555 cgctgccgctgccgccgccgcc 55576
>gb|DQ383414.1| Oryza sativa (indica cultivar-group) voucher IRGC 50490 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383413.1| Oryza sativa (japonica cultivar-group) voucher IRGC 38994 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383412.1| Oryza sativa (indica cultivar-group) voucher IRGC 6294 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383411.2| Oryza sativa (japonica cultivar-group) cultivar Taipei 309 shattering protein (sh4) gene, partial cds Length = 1650 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1402 cgctgccgctgccgccgccgcc 1423
>gb|DQ383410.1| Oryza sativa (japonica cultivar-group) cultivar Au8234 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383409.1| Oryza sativa (japonica cultivar-group) cultivar Taizhong 65 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383408.1| Oryza sativa (japonica cultivar-group) cultivar BL 377 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383407.1| Oryza sativa (indica cultivar-group) cultivar BL 272 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383406.1| Oryza sativa (japonica cultivar-group) cultivar PI 392542 shattering protein (sh4) gene, partial cds Length = 1650 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1402 cgctgccgctgccgccgccgcc 1423
>gb|DQ383405.1| Oryza sativa (japonica cultivar-group) cultivar PI 392539 shattering protein (sh4) gene, partial cds Length = 1650 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1402 cgctgccgctgccgccgccgcc 1423
>gb|DQ383404.1| Oryza sativa (japonica cultivar-group) cultivar BL 446 shattering protein (sh4) gene, partial cds Length = 1650 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1402 cgctgccgctgccgccgccgcc 1423
>gb|DQ383403.1| Oryza sativa (indica cultivar-group) voucher IRGC 58278 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383402.1| Oryza sativa (indica cultivar-group) voucher IRGC 9148 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383401.1| Oryza sativa (japonica cultivar-group) voucher IRGC 1715 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383399.1| Oryza rufipogon voucher IRGC 80534 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383398.1| Oryza rufipogon voucher IRGC 80529 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383397.1| Oryza rufipogon voucher IRGC 106122 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383396.1| Oryza rufipogon voucher IRGC 105953 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383395.1| Oryza rufipogon voucher IRGC 104311 shattering protein (sh4) gene, partial cds Length = 1638 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1390 cgctgccgctgccgccgccgcc 1411
>gb|DQ383394.1| Oryza nivara voucher IRGC 106345 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383393.1| Oryza nivara voucher IRGC 106185 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383392.1| Oryza nivara voucher IRGC 105894 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383390.1| Oryza nivara voucher IRGC 105859 shattering protein (sh4) gene, partial cds Length = 1643 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1395 cgctgccgctgccgccgccgcc 1416
>gb|DQ383388.1| Oryza nivara voucher IRGC 105742 shattering protein (sh4) gene, partial cds Length = 1638 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1390 cgctgccgctgccgccgccgcc 1411
>gb|DQ383387.1| Oryza nivara voucher IRGC 105706 shattering protein (sh4) gene, partial cds Length = 1658 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1407 cgctgccgctgccgccgccgcc 1428
>gb|DQ383386.1| Oryza nivara voucher IRGC 105705 shattering protein (sh4) gene, partial cds Length = 1658 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1407 cgctgccgctgccgccgccgcc 1428
>gb|DQ383385.1| Oryza nivara voucher IRGC 105703 shattering protein (sh4) gene, partial cds Length = 1658 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1407 cgctgccgctgccgccgccgcc 1428
>gb|DQ383384.1| Oryza nivara voucher IRGC 105702 shattering protein (sh4) gene, partial cds Length = 1658 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1407 cgctgccgctgccgccgccgcc 1428
>gb|DQ383381.1| Oryza nivara voucher IRGC 105391 shattering protein (sh4) gene, partial cds Length = 1635 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1387 cgctgccgctgccgccgccgcc 1408
>gb|DQ383380.1| Oryza nivara voucher IRGC 105319 shattering protein (sh4) gene, partial cds Length = 1644 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1396 cgctgccgctgccgccgccgcc 1417
>gb|DQ383379.1| Oryza nivara voucher IRGC 104697 shattering protein (sh4) gene, partial cds Length = 1656 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1408 cgctgccgctgccgccgccgcc 1429
>gb|DQ383378.1| Oryza nivara voucher IRGC 104687 shattering protein (sh4) gene, partial cds Length = 1657 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1406 cgctgccgctgccgccgccgcc 1427
>gb|DQ383377.1| Oryza nivara voucher IRGC 103838 shattering protein (sh4) gene, partial cds Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1405 cgctgccgctgccgccgccgcc 1426
>gb|DQ383376.1| Oryza nivara voucher IRGC 101967 shattering protein (sh4) gene, partial cds Length = 1643 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1395 cgctgccgctgccgccgccgcc 1416
>gb|DQ383374.1| Oryza sativa (indica cultivar-group) cultivar CL 16 shattering protein (sh4) mRNA, complete cds Length = 1173 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 668 cgctgccgctgccgccgccgcc 689
>gb|DQ383373.1| Oryza sativa (indica cultivar-group) cultivar CL 16 shattering protein (sh4) gene, complete cds Length = 5075 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 3220 cgctgccgctgccgccgccgcc 3241
>gb|DQ383372.1| Oryza nivara voucher IRGC 80470 shattering protein (sh4) mRNA, complete cds Length = 1155 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 650 cgctgccgctgccgccgccgcc 671
>gb|DQ383371.1| Oryza nivara voucher IRGC 80470 shattering protein (sh4) gene, complete cds Length = 5064 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 3211 cgctgccgctgccgccgccgcc 3232
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 2794748 cgctgccgctgccgccgccgcc 2794727
>emb|AL137159.7| Human DNA sequence from clone RP4-713B5 on chromosome 1p21.2-22.2 Contains the 5' end of a novel gene, the DR1 gene for down-regulator of transcription 1, TBP-binding (negative cofactor 2) and a pseudogene similar to part of F-box and WD-40 domain protein 1B (FBXW1B), complete sequence Length = 104552 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 51268 cgctgccgctgccgccgccgcc 51247
>emb|AL121777.39|HSJ1057D4 Human DNA sequence from clone RP5-1057D4 on chromosome 20 Contains the SRMP1 gene for spermidine synthase pseudogene 1, the 5' end of the gene for a novel protein similar to glucosamine-6-sulfatases (SULF2) (sulfatase 2, H-SULF2, KIAA1247) and a CpG island, complete sequence Length = 131888 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 21995 cgctgccgctgccgccgccgcc 22016
>gb|AF104410.3| Mus musculus vascular endothelial zinc finger 1 (Vezf1) mRNA, complete cds Length = 4578 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 16 cgctgccgctgccgccgccgcc 37
>emb|X16302.1|HSIGFBP2 Human mRNA for insulin-like growth factor binding protein (IGFBP-2) Length = 1433 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 143 cgctgccgctgccgccgccgcc 164
>emb|X69911.1|HVCMDAAI H.vulgare gene for CMd subunit of tetrameric alpha-amylase inhibitor Length = 2121 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 786 cgctgccgctgccgccgccgcc 807
>emb|X69939.1|HVBTAI3 H.vulgare BTAI3 mRNA encoding CMd, component of tetrameric alpha-amylase inhibitor Length = 600 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 66 cgctgccgctgccgccgccgcc 87
>emb|X13198.1|TACMD Barley mRNA for seed protein CMd Length = 579 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 34 cgctgccgctgccgccgccgcc 55
>ref|NM_020690.4| Homo sapiens MASK-4E-BP3 alternate reading frame gene (MASK-BP3), mRNA Length = 8319 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 323 cgctgccgctgccgccgccgcc 302
>gb|BC050341.1| Homo sapiens cullin-associated and neddylation-dissociated 1, mRNA (cDNA clone MGC:51033 IMAGE:5265409), complete cds Length = 4182 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 87 cgctgccgctgccgccgccgcc 66
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 43815 cgctgccgctgccgccgccgcc 43794
>emb|AL691413.5| Mouse DNA sequence from clone RP23-309E11 on chromosome 11 Contains a microtubule-associated protein 1 light chain 3 (Map1lc3) pseudogene, an interferon induced transmembrane protein 3-like (Ifitm3l) pseudogene, two novel pseudogenes, two novel genes, the 3' end of the Osbp2 gene for oxysterol binding protein 2 and two CpG islands, complete sequence Length = 164047 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 102507 cgctgccgctgccgccgccgcc 102486
>emb|AL593853.11| Mouse DNA sequence from clone RP23-199A2 on chromosome 11 Contains the 5' end of a novel gene, the Sfrs1 gene for arginine/serine-rich splicing factor 1 (ASF/SF2), the Vezf1 gene for vascular endothelial zinc finger 1, a novel gene (2210416O15Rik), the gene for the likely ortholog of H. sapiens CUE domain containing 1 CUEDC1 (C330016O16Rik), the Mrps23 gene for mitochondrial ribosomal protein S23 and two CpG islands, complete sequence Length = 223276 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 35237 cgctgccgctgccgccgccgcc 35258
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 177744 cgctgccgctgccgccgccgcc 177723
>emb|AJ844915.1| Mus musculus mRNA for transcription factor Sp9 (Sp9 gene) Length = 1428 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1350 cgctgccgctgccgccgccgcc 1329
>gb|AF511533.1| Homo sapiens RALBP1 associated Eps domain containing protein 2a (REPS2) mRNA, complete cds Length = 1980 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 42 cgctgccgctgccgccgccgcc 21
>gb|AF512951.1| Homo sapiens RALBP1 associated Eps domain containing protein 2b (REPS2) mRNA, complete cds Length = 1980 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 42 cgctgccgctgccgccgccgcc 21
>emb|AJ243485.1|MMU243485 Mus Musculus mRNA for AMMECR1 protein Length = 1819 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 295 cgctgccgctgccgccgccgcc 274
>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the 5' end of Ntn1 gene for netrin 1, three genes for a novel proteins (F730038I15Rik), the 3' end of a novel gene (4930535C22Rik) and two CpG islands, complete sequence Length = 221455 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 23219 cgctgccgctgccgccgccgcc 23240
>emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chromosome 11 Contains an H+ transporting ATP synthase mitochondrial F0 complex subunit g (Atp5l) pseudogene, a ferritin light chain 1 (Ftl1) pseudogene, three novel genes, the gene for a novel ENTH domain containing protein, the 5' end of the Sox30 gene for SRY-box containing gene 30 and three Cpg islands, complete sequence Length = 207877 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 204899 cgctgccgctgccgccgccgcc 204920
>gb|BC071967.1| Homo sapiens insulin-like growth factor binding protein 2, 36kDa, mRNA (cDNA clone MGC:88661 IMAGE:6650239), complete cds Length = 1418 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 133 cgctgccgctgccgccgccgcc 154
>gb|BC035507.2| Homo sapiens down-regulator of transcription 1, TBP-binding (negative cofactor 2), mRNA (cDNA clone MGC:29766 IMAGE:4555131), complete cds Length = 3222 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 283 cgctgccgctgccgccgccgcc 262
>emb|AL833474.1|HSM804787 Homo sapiens mRNA; cDNA DKFZp686N2317 (from clone DKFZp686N2317) Length = 2636 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 46 cgctgccgctgccgccgccgcc 25
>emb|CR860645.1| Pongo pygmaeus mRNA; cDNA DKFZp459E1224 (from clone DKFZp459E1224) Length = 3022 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 281 ctcgctgccgctgccgccgccgccca 306 ||||| |||||||||||||||||||| Sbjct: 48 ctcgccgccgctgccgccgccgccca 73
>emb|AL833729.1|HSM805042 Homo sapiens mRNA; cDNA DKFZp666G145 (from clone DKFZp666G145) Length = 3204 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 266 cgctgccgctgccgccgccgcc 245
>emb|AL136810.1|HSM801778 Homo sapiens mRNA; cDNA DKFZp434G0222 (from clone DKFZp434G0222) Length = 5387 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 303 cgctgccgctgccgccgccgcc 282
>emb|Z79582.1|MMLAZ3 M.musculus LAZ3/BCL6 gene, first intron Length = 4138 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 1645 cgctgccgctgccgccgccgcc 1666
>dbj|AK128596.1| Homo sapiens cDNA FLJ46755 fis, clone TRACH3023373, highly similar to Colorectal mutant cancer protein Length = 3334 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 489 cgctgccgctgccgccgccgcc 468
>emb|CR624731.1| full-length cDNA clone CS0DI078YA05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1356 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 116 cgctgccgctgccgccgccgcc 137
>emb|CR625740.1| full-length cDNA clone CS0DM014YH20 of Fetal liver of Homo sapiens (human) Length = 1379 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 135 cgctgccgctgccgccgccgcc 156
>emb|CR625396.1| full-length cDNA clone CS0DI019YB08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1274 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 50 cgctgccgctgccgccgccgcc 71
>ref|NM_001144.4| Homo sapiens autocrine motility factor receptor (AMFR), mRNA Length = 3594 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 106 cgctgccgctgccgccgccgcc 85
>ref|NM_003884.3| Homo sapiens p300/CBP-associated factor (PCAF), mRNA Length = 4838 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 181 cgctgccgctgccgccgccgcc 160
>emb|CR623237.1| full-length cDNA clone CS0DE002YB20 of Placenta of Homo sapiens (human) Length = 1356 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 116 cgctgccgctgccgccgccgcc 137
>emb|CR621666.1| full-length cDNA clone CS0DB003YE22 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 995 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 232 cgctgccgctgccgccgccgcc 211
>ref|NM_018448.2| Homo sapiens cullin-associated and neddylation-dissociated 1 (CAND1), mRNA Length = 5387 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 303 cgctgccgctgccgccgccgcc 282
>ref|NM_198438.1| Mus musculus single-stranded DNA binding protein 3 (Ssbp3), transcript variant 2, mRNA Length = 3130 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 58 cgctgccgctgccgccgccgcc 37
>ref|NM_023672.2| Mus musculus single-stranded DNA binding protein 3 (Ssbp3), transcript variant 1, mRNA Length = 3211 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 58 cgctgccgctgccgccgccgcc 37
>dbj|AK096010.1| Homo sapiens cDNA FLJ38691 fis, clone KIDNE2001467, highly similar to Rattus norvegicus mRNA for TIP120 Length = 2087 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 297 cgctgccgctgccgccgccgcc 276
>emb|CR618404.1| full-length cDNA clone CS0DJ013YN16 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1424 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 155 cgctgccgctgccgccgccgcc 176
>emb|CR614828.1| full-length cDNA clone CS0DI021YH18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1345 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 120 cgctgccgctgccgccgccgcc 141
>emb|CR611812.1| full-length cDNA clone CS0DC020YC06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1385 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 116 cgctgccgctgccgccgccgcc 137
>emb|CR610845.1| full-length cDNA clone CS0DI075YM21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1386 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 116 cgctgccgctgccgccgccgcc 137
>emb|CR609983.1| full-length cDNA clone CS0DD007YL03 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1563 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 264 cgctgccgctgccgccgccgcc 243
>emb|CR607166.1| full-length cDNA clone CS0DI086YB24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1227 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 116 cgctgccgctgccgccgccgcc 137
>emb|CR606776.1| full-length cDNA clone CS0DE001YE23 of Placenta of Homo sapiens (human) Length = 1276 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 66 cgctgccgctgccgccgccgcc 87
>emb|CR606726.1| full-length cDNA clone CS0DD007YP24 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1289 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 20 cgctgccgctgccgccgccgcc 41
>emb|CR606610.1| full-length cDNA clone CS0DC003YB05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1371 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 116 cgctgccgctgccgccgccgcc 137
>emb|CR603558.1| full-length cDNA clone CS0DC019YK05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1300 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 51 cgctgccgctgccgccgccgcc 72
>emb|CR603359.1| full-length cDNA clone CS0DI032YD03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1345 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 76 cgctgccgctgccgccgccgcc 97
>emb|CR602232.1| full-length cDNA clone CS0DC017YL01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1369 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 116 cgctgccgctgccgccgccgcc 137
>emb|CR601197.1| full-length cDNA clone CS0DC016YA21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1293 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 46 cgctgccgctgccgccgccgcc 67
>gb|AC011399.6| Homo sapiens chromosome 5 clone CTB-25P15, complete sequence Length = 174158 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 163712 cgctgccgctgccgccgccgcc 163733
>gb|AC008438.6| Homo sapiens chromosome 5 clone CTC-329D1, complete sequence Length = 85718 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 60565 cgctgccgctgccgccgccgcc 60544
>dbj|AK057228.1| Homo sapiens cDNA FLJ32666 fis, clone TESTI1000096 Length = 2312 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 34 cgctgccgctgccgccgccgcc 13
>emb|CR596315.1| full-length cDNA clone CS0DI085YI18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1297 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 45 cgctgccgctgccgccgccgcc 66
>emb|CR595316.1| full-length cDNA clone CS0DB008YG08 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1383 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 117 cgctgccgctgccgccgccgcc 138
>emb|CR594311.1| full-length cDNA clone CS0DM010YA12 of Fetal liver of Homo sapiens (human) Length = 1252 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 10 cgctgccgctgccgccgccgcc 31
>emb|CR592781.1| full-length cDNA clone CS0DF022YF02 of Fetal brain of Homo sapiens (human) Length = 1396 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 116 cgctgccgctgccgccgccgcc 137
>emb|CR590929.1| full-length cDNA clone CS0DC028YC19 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1341 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 93 cgctgccgctgccgccgccgcc 114
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence Length = 146022 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 113878 cgctgccgctgccgccgccgcc 113857
>gb|AC116608.1| Papio hamadryas chromosome , clone RP41-155I24, complete sequence Length = 161654 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 62814 cgctgccgctgccgccgccgcc 62835
>dbj|AK133410.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933416E08 product:hypothetical Proline-rich region profile/Alanine-rich region profile containing protein, full insert sequence Length = 1378 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 222 cgctgccgctgccgccgccgcc 243
>dbj|AK133226.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932418P17 product:hypothetical Alanine-rich region profile containing protein, full insert sequence Length = 2756 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 2242 cgctgccgctgccgccgccgcc 2221
>gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, complete sequence Length = 187067 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 102691 cgctgccgctgccgccgccgcc 102712
>dbj|AK134242.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5832425O10 product:unclassifiable, full insert sequence Length = 3096 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 67 cgctgccgctgccgccgccgcc 46
>dbj|AK138087.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130089M21 product:HBV pX associated protein 8 large isoform homolog [Homo sapiens], full insert sequence Length = 2606 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 60 cgctgccgctgccgccgccgcc 39
>ref|NM_004726.1| Homo sapiens RALBP1 associated Eps domain containing 2 (REPS2), mRNA Length = 2285 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 213 cgctgccgctgccgccgccgcc 192
>dbj|AK146154.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730024D14 product:HBV pX associated protein 8 large isoform homolog [Homo sapiens], full insert sequence Length = 937 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 48 cgctgccgctgccgccgccgcc 27
>dbj|AK146675.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920040M16 product:hepatitis B virus x associated protein, full insert sequence Length = 3004 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 60 cgctgccgctgccgccgccgcc 39
>ref|XM_938519.1| PREDICTED: Homo sapiens hypothetical protein DKFZP434I0714 (DKFZP434I0714), mRNA Length = 3678 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 474 cgctgccgctgccgccgccgcc 453
>ref|XM_929673.1| PREDICTED: Homo sapiens hypothetical protein DKFZP434I0714 (DKFZP434I0714), mRNA Length = 3678 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 474 cgctgccgctgccgccgccgcc 453
>gb|AF258557.1|AF258557 Homo sapiens PP2500 mRNA, complete cds Length = 2153 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 313 cgctgccgctgccgccgccgcc 292
>gb|AC080089.5| Homo sapiens BAC clone RP11-785J10 from 4, complete sequence Length = 174023 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 101525 cgctgccgctgccgccgccgcc 101504
>gb|AC023424.7| Homo sapiens BAC clone RP11-555K12 from 4, complete sequence Length = 200147 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 113801 cgctgccgctgccgccgccgcc 113780
>ref|NM_024668.2| Homo sapiens ankyrin repeat and KH domain containing 1 (ANKHD1), transcript variant 3, mRNA Length = 2164 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 323 cgctgccgctgccgccgccgcc 302
>ref|NM_017978.1| Homo sapiens ankyrin repeat and KH domain containing 1 (ANKHD1), transcript variant 2, mRNA Length = 2149 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 323 cgctgccgctgccgccgccgcc 302
>ref|NM_017747.1| Homo sapiens ankyrin repeat and KH domain containing 1 (ANKHD1), transcript variant 1, mRNA Length = 8196 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 323 cgctgccgctgccgccgccgcc 302
>ref|XM_943229.1| PREDICTED: Homo sapiens hypothetical protein LOC648173 (LOC648173), mRNA Length = 3557 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 184 cgctgccgctgccgccgccgcc 205
>ref|XM_933969.1| PREDICTED: Homo sapiens hypothetical protein LOC646848 (LOC646848), mRNA Length = 3557 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 184 cgctgccgctgccgccgccgcc 205
>gb|AC090493.4| Genomic sequence for Mus musculus, clone RP23-201D19,, complete sequence Length = 208651 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 cgctgccgctgccgccgccgcc 304 |||||||||||||||||||||| Sbjct: 109156 cgctgccgctgccgccgccgcc 109177 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,136,023 Number of Sequences: 3902068 Number of extensions: 4136023 Number of successful extensions: 165930 Number of sequences better than 10.0: 819 Number of HSP's better than 10.0 without gapping: 849 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 154646 Number of HSP's gapped (non-prelim): 10919 length of query: 477 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 455 effective length of database: 17,147,199,772 effective search space: 7801975896260 effective search space used: 7801975896260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)