ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart46d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DOF13_ARATH (Q9LQX4) Hypothetical Dof zinc finger protein DOF1.3... 29 8.7

>DOF13_ARATH (Q9LQX4) Hypothetical Dof zinc finger protein DOF1.3 (AtDOF1.3)|
          Length = 366

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 84  NLQRLLPRVAPRPNRLPPWMERWPPSPSF 170
           N Q LLP  A   +  PPW  ++PP+PSF
Sbjct: 218 NFQGLLPPQASPVS--PPWPYQYPPNPSF 244


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,763,477
Number of Sequences: 219361
Number of extensions: 1105844
Number of successful extensions: 2811
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2807
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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