>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                
Query: 284     gttaaccgaatccaggagggacatcaggatcctcatcatcggcatcccc 332
               ||||||| || |||||||| |||||||||||||| |||||  |||||||
Sbjct: 6758223 gttaaccaaacccaggaggcacatcaggatcctcctcatcatcatcccc 6758175



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 353     gctcaccaccatttggtttcacttgggcatgattct 388
               |||||||  |||||||||||||||||  ||||||||
Sbjct: 6758154 gctcaccttcatttggtttcacttggttatgattct 6758119

>gb|AC099732.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1203D03,
             complete sequence
          Length = 82352

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 284   gttaaccgaatccaggagggacatcaggatcctcatcatcggcatcccc 332
             ||||||| || |||||||| |||||||||||||| |||||  |||||||
Sbjct: 66522 gttaaccaaacccaggaggcacatcaggatcctcctcatcatcatcccc 66570



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 353   gctcaccaccatttggtttcacttgggcatgattct 388
             |||||||  |||||||||||||||||  ||||||||
Sbjct: 66591 gctcaccttcatttggtttcacttggttatgattct 66626

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                
Query: 284     gttaaccgaatccaggagggacatcaggatcctcatcatcggcatcccc 332
               ||||||| || |||||||| |||||||||||||| |||||  |||||||
Sbjct: 6757436 gttaaccaaacccaggaggcacatcaggatcctcctcatcatcatcccc 6757388



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 353     gctcaccaccatttggtttcacttgggcatgattct 388
               |||||||  |||||||||||||||||  ||||||||
Sbjct: 6757367 gctcaccttcatttggtttcacttggttatgattct 6757332

>dbj|AK101799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066F19, full
           insert sequence
          Length = 1024

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 284 gttaaccgaatccaggagggacatcaggatcctcatcatcggcatcccc 332
           ||||||| || |||||||| |||||||||||||| |||||  |||||||
Sbjct: 829 gttaaccaaacccaggaggcacatcaggatcctcctcatcatcatcccc 781



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 353 gctcaccaccatttggtttcacttgggcatgattct 388
           |||||||  |||||||||||||||||  ||||||||
Sbjct: 760 gctcaccttcatttggtttcacttggttatgattct 725

>ref|XM_470601.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 741

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 285 ttaaccgaatccaggagggacatcaggatcctcatcatcggcatcccc 332
           |||||| || |||||||| |||||||||||||| |||||  |||||||
Sbjct: 741 ttaaccaaacccaggaggcacatcaggatcctcctcatcatcatcccc 694



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 353 gctcaccaccatttggtttcacttgggcatgattct 388
           |||||||  |||||||||||||||||  ||||||||
Sbjct: 673 gctcaccttcatttggtttcacttggttatgattct 638

>ref|XM_455594.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F11297g predicted mRNA
          Length = 1482

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 351 tagctcaccaccatttggtttcacttg 377
           |||||||||| ||||||||||||||||
Sbjct: 866 tagctcaccaacatttggtttcacttg 892

>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 351     tagctcaccaccatttggtttcacttg 377
               |||||||||| ||||||||||||||||
Sbjct: 1040664 tagctcaccaacatttggtttcacttg 1040638

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 306     atcaggatcctcatcatcggcatcc 330
               ||||||| |||||||||||||||||
Sbjct: 3745897 atcaggaacctcatcatcggcatcc 3745873

>ref|XM_388845.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08669.1)
            partial mRNA
          Length = 2400

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 390  cccatcatcacatggcttctc 410
            |||||||||||||||||||||
Sbjct: 2008 cccatcatcacatggcttctc 2028

>gb|AC108221.4| Homo sapiens BAC clone RP11-783P19 from 4, complete sequence
          Length = 59605

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 252   cacaaaaagatgtcatggaaaattg 276
             ||||||||||||| |||||||||||
Sbjct: 25598 cacaaaaagatgtgatggaaaattg 25574

>gb|AC007335.7| Homo sapiens chromosome 16 clone RP11-165M2, complete sequence
          Length = 134482

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 156   cacagaatggacaggtcactttca 179
             ||||||||||||||||| ||||||
Sbjct: 69316 cacagaatggacaggtccctttca 69293

>gb|AC137948.12| Mus musculus chromosome 1, clone RP23-393D20, complete sequence
          Length = 233077

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  aaagctaaagccaagggcgc 131
            ||||||||||||||||||||
Sbjct: 9787 aaagctaaagccaagggcgc 9768

>gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, complete sequence
          Length = 215781

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   aaagctaaagccaagggcgc 131
             ||||||||||||||||||||
Sbjct: 80283 aaagctaaagccaagggcgc 80302

>gb|AC113126.10| Mus musculus chromosome 6, clone RP23-352D5, complete sequence
          Length = 176364

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    attgtttggggaaaacattt 76
             ||||||||||||||||||||
Sbjct: 28100 attgtttggggaaaacattt 28081

>emb|AL390239.16| Human DNA sequence from clone RP11-58J3 on chromosome 9 Contains part
             of the PCA3 gene for prostate cancer antigen 3 (DD3), a
             novel gene (LOC158471) and a CpG island, complete sequence
          Length = 129109

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aattgtttggggaaaacatt 75
             ||||||||||||||||||||
Sbjct: 49801 aattgtttggggaaaacatt 49820

>gb|AY338495.1| Gossypium hirsutum homeodomain protein BNLGHi6313 (bnlghi6313)
           mRNA, complete cds
          Length = 3023

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 caaaaagatgtcatggaaaa 273
           ||||||||||||||||||||
Sbjct: 117 caaaaagatgtcatggaaaa 98

>emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1, COMPLETE SEQUENCE
          Length = 116729

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 25    ctcaaaaaacaaaatatgccacaa 48
             ||||||||||||||||||| ||||
Sbjct: 98161 ctcaaaaaacaaaatatgctacaa 98184

>gb|AC020766.10| Homo sapiens chromosome 16 clone RP11-70N16, complete sequence
          Length = 173595

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 156    cacagaatggacaggtcactttca 179
              ||||||||||||||||| ||||||
Sbjct: 123147 cacagaatggacaggtccctttca 123170

>emb|BX510932.8| Zebrafish DNA sequence from clone DKEY-188M6 in linkage group 21,
             complete sequence
          Length = 156832

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aacaaaatatgccacaatct 51
             ||||||||||||||||||||
Sbjct: 60645 aacaaaatatgccacaatct 60626

>gb|DQ274179.2| Solanum tuberosum patatin-rich BAC 14K07, complete sequence
          Length = 154382

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    caaaatatgccacaatctactcaa 57
             |||||||||| |||||||||||||
Sbjct: 21225 caaaatatgcaacaatctactcaa 21202

>gb|AC154358.2| Mus musculus BAC clone RP23-173M16 from chromosome 13, complete
            sequence
          Length = 193594

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 372  cacttgggcatgattctgcccatcatca 399
            |||||||| ||||||||||| |||||||
Sbjct: 4805 cacttgggtatgattctgcctatcatca 4778

>gb|AC007356.8|AC007356 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone
             BACR24H09, complete sequence
          Length = 189557

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    caattgtttggggaaaacat 74
             ||||||||||||||||||||
Sbjct: 81181 caattgtttggggaaaacat 81200

>emb|AJ328256.1|HSA328256 Homo sapiens genomic sequence surrounding NotI site, clone
           NL4-CL14RS
          Length = 715

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  aaaaaacaaaatatgccaca 47
           ||||||||||||||||||||
Sbjct: 511 aaaaaacaaaatatgccaca 492

>gb|AE003822.3| Drosophila melanogaster chromosome 2R, section 28 of 73 of the complete
              sequence
          Length = 233148

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     caattgtttggggaaaacat 74
              ||||||||||||||||||||
Sbjct: 219192 caattgtttggggaaaacat 219211

>emb|AL772139.9| Mouse DNA sequence from clone RP23-8O24 on chromosome 4, complete
             sequence
          Length = 109835

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   ccactagctcaccaccattt 366
             ||||||||||||||||||||
Sbjct: 78225 ccactagctcaccaccattt 78206

>emb|AL672194.1| Mouse DNA sequence from clone RP23-73P3 on chromosome 13, complete
             sequence
          Length = 173598

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 372   cacttgggcatgattctgcccatcatca 399
             |||||||| ||||||||||| |||||||
Sbjct: 84210 cacttgggtatgattctgcctatcatca 84183


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,529,071
Number of Sequences: 3902068
Number of extensions: 4529071
Number of successful extensions: 104167
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104063
Number of HSP's gapped (non-prelim): 104
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)