>SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor|
          Length = 2213

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = +1

Query: 16   ISITNTTVNYRHLIRSSS*HAYGNGPKATGEQANKQKRRGSA------RPAGSTTSPTSW 177
            + + N T + ++L+  S+ +A G+GPK+  +Q    +    A          STT   SW
Sbjct: 1763 VRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGAPSFLAFSEITSTTLNVSW 1822

Query: 178  GHASCRN 198
            G  +  N
Sbjct: 1823 GEPAAAN 1829

>RS30_ARATH (P49689) 40S ribosomal protein S30|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 196 FGKKRGPNSSEK 161
           FGKKRGPNSSEK
Sbjct: 51  FGKKRGPNSSEK 62

>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG|
           repeat protein 26) (Glycin-tryptophan protein of 182
           kDa) (GW182 autoantigen) (GW1 protein) (EMSY interactor
           protein)
          Length = 1962

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +1

Query: 85  NGPKATGEQANKQKRRGSARPAGSTTSPTSWGHASCRN 198
           NGP  T  Q N  K  G      + +  TSWG  +  N
Sbjct: 556 NGPMGTNFQVNTNKGGGVWESGAANSQSTSWGSGNGAN 593


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.125    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,541,773
Number of Sequences: 219361
Number of extensions: 351729
Number of successful extensions: 891
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 80,573,946
effective HSP length: 41
effective length of database: 71,580,145
effective search space used: 1717923480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)