ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart46b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FIT1_YEAST (Q04433) Facilitator of iron transport 1 precursor 28 5.5

>FIT1_YEAST (Q04433) Facilitator of iron transport 1 precursor|
          Length = 528

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 2   LTPNLTSIT*FIQYIRDRSVSSSQRHNKITWIFNGQTTSNSSGSK 136
           L+P  TS++  +Q       SS+ + + +   F+  TT NSS SK
Sbjct: 373 LSPTQTSLSSSVQASSPIETSSAAKTSSVVPTFSSTTTENSSNSK 417


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,504,010
Number of Sequences: 219361
Number of extensions: 482853
Number of successful extensions: 992
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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