ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart46b02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB161683.1| Triticum aestivum WCSP3 mRNA for cold shock domain protein 3, complete cds Length = 1025 Score = 456 bits (230), Expect = e-125 Identities = 324/352 (92%), Gaps = 5/352 (1%) Strand = Plus / Minus Query: 1 tttgacaccaaacttgacttcgataacttagttcatccaatacataagagatagatctgt 60 |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 1011 tttgacaccaaacttgacttcgataacttagtccatccaacacata---gatagatctgt 955 Query: 61 gtcctcatcacagagacacaacaaaataacttggatctttaacggacaaaccaccagcaa 120 |||||||||||||||| ||| |||||||||||||||||| |||| ||| ||||||||||| Sbjct: 954 gtcctcatcacagagagacagcaaaataacttggatctt-aacgaacacaccaccagcaa 896 Query: 121 ttcttctggatccaagctcgcatggagcagcacggggaaacgctacggcgactaatacta 180 |||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 895 ttcttctggaaccaagctcgcatcgagcagcagggggaaacgctacggcgactaatacta 836 Query: 181 gtactgataggtatagg-tatgacttgatgcaggatcaggagataggaaaaggagcgaag 239 ||||||||||||||||| ||||||||| ||||| |||||||| |||| |||||||| | | Sbjct: 835 gtactgataggtatagggtatgacttgctgcagaatcaggaggtaggtaaaggagcaagg 776 Query: 240 gggaagggggcactcagatctgacgggctgcgccgcttagtgggccttgttggggcactc 299 | || ||||||||||||||||| | |||| ||||| ||||||||||||||||||||||| Sbjct: 775 gtaaacggggcactcagatctgaagagctgtgccgcctagtgggccttgttggggcactc 716 Query: 300 gcgggagaagtggccagactcgccgcaggagaagcagccgccaccgccgccg 351 ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 715 gcgggagaagtggccggactcgccgcaggagaagcagccgccaccgccgccg 664
>dbj|AB066265.2| Triticum aestivum WCSP1 mRNA for cold shock protein-1, complete cds Length = 1029 Score = 422 bits (213), Expect = e-115 Identities = 312/342 (91%), Gaps = 6/342 (1%) Strand = Plus / Minus Query: 19 ttcgataacttagttcatccaatacataagagatagatctgtgtcctcatcacagagaca 78 |||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||| | Sbjct: 1008 ttcgataacttagtccatccaacacata---gatagatctgtgtcctcatcacagagaga 952 Query: 79 caacaaaataacttggatcttta--acggacaaaccaccagcaattcttctggatccaag 136 ||||||||||||||||||||| | ||| ||| ||||||||||||||||||||| ||||| Sbjct: 951 caacaaaataacttggatcttaacgacgaacacaccaccagcaattcttctggaaccaag 892 Query: 137 ctcgcatggagcagcacggggaaacgctacggcgactaatactagtactgataggtatag 196 |||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 891 ctcggatcgagcagcagggggaaacgctacggcgactaatactagtactgataggtatag 832 Query: 197 g-tatgacttgatgcaggatcaggagataggaaaaggagcgaaggggaagggggcactca 255 | ||||||||| ||||| |||||||| |||| |||||||||| || || |||||||||| Sbjct: 831 ggtatgacttgctgcagaatcaggaggtaggtaaaggagcgagggtaaacggggcactca 772 Query: 256 gatctgacgggctgcgccgcttagtgggccttgttggggcactcgcgggagaagtggcca 315 ||||||| | |||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 771 gatctgaagagctgtgccgcctagtgggccttgttggggcactcgcgggagaagtggccg 712 Query: 316 gactcgccgcaggagaagcagccgccaccgccgccgtcgccg 357 |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 711 gactcgccgcaggagaagcagccgccaccgccgccgccgccg 670
>dbj|AB161682.1| Triticum aestivum WCSP2 mRNA for cold shock domain protein 2, complete cds Length = 990 Score = 240 bits (121), Expect = 3e-60 Identities = 169/185 (91%) Strand = Plus / Minus Query: 163 ctacggcgactaatactagtactgataggtataggtatgacttgatgcaggatcaggaga 222 |||||||||| |||||| ||||||||||||||||||||||||| ||||| ||||| | Sbjct: 789 ctacggcgacatatactaatactgataggtataggtatgacttgctgcagagtcaggcgg 730 Query: 223 taggaaaaggagcgaaggggaagggggcactcagatctgacgggctgcgccgcttagtgg 282 |||||||||||||||||||||| |||| ||||||||||||||||| ||||||| |||| | Sbjct: 729 taggaaaaggagcgaaggggaacggggaactcagatctgacgggcagcgccgcctagttg 670 Query: 283 gccttgttggggcactcgcgggagaagtggccagactcgccgcaggagaagcagccgcca 342 | |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 669 gtcttgttggggcactcgcgcgagaagtggccggactcgccgcaggagaagcagccgcca 610 Query: 343 ccgcc 347 ||||| Sbjct: 609 ccgcc 605 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 111 ccaccagcaattcttctggatccaagctcgcat 143 |||||| |||| |||||||| |||||||||||| Sbjct: 857 ccaccaacaatacttctggaaccaagctcgcat 825
>dbj|AB158409.1| Triticum aestivum GRP mRNA for putative glycine-rich protein, complete cds Length = 996 Score = 240 bits (121), Expect = 3e-60 Identities = 169/185 (91%) Strand = Plus / Minus Query: 163 ctacggcgactaatactagtactgataggtataggtatgacttgatgcaggatcaggaga 222 |||||||||| |||||| ||||||||||||||||||||||||| ||||| ||||| | Sbjct: 789 ctacggcgacatatactaatactgataggtataggtatgacttgctgcagagtcaggcgg 730 Query: 223 taggaaaaggagcgaaggggaagggggcactcagatctgacgggctgcgccgcttagtgg 282 |||||||||||||||||||||| |||| ||||||||||||||||| ||||||| |||| | Sbjct: 729 taggaaaaggagcgaaggggaacggggaactcagatctgacgggcagcgccgcctagttg 670 Query: 283 gccttgttggggcactcgcgggagaagtggccagactcgccgcaggagaagcagccgcca 342 | |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 669 gtcttgttggggcactcgcgcgagaagtggccggactcgccgcaggagaagcagccgcca 610 Query: 343 ccgcc 347 ||||| Sbjct: 609 ccgcc 605 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 111 ccaccagcaattcttctggatccaagctcgcat 143 |||||| |||| |||||||| |||||||||||| Sbjct: 857 ccaccaacaatacttctggaaccaagctcgcat 825
>emb|AJ234726.1|HVU234726 Hordeum vulgare genomic DNA fragment; clone MWG2034.rev Length = 312 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 149 agcacggggaaacgctacggcgactaatactagtactgataggtataggtatgacttg 206 ||||||||| ||| |||||||||| |||||| |||||||||||||| |||||||||| Sbjct: 58 agcacggggtaacactacggcgacatatactaatactgataggtatatgtatgacttg 1
>ref|XM_955512.1| Neurospora crassa OR74A hypothetical protein (NCU08923.1) partial mRNA Length = 552 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 289 ttggggcactcgcgggagaagtggccagactcgccgcag 327 |||||||| || ||||||||||||||||||||||||||| Sbjct: 473 ttggggcagtcacgggagaagtggccagactcgccgcag 435
>ref|XM_331314.1| Neurospora crassa OR74A hypothetical protein (NCU08923.1) partial mRNA Length = 552 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 289 ttggggcactcgcgggagaagtggccagactcgccgcag 327 |||||||| || ||||||||||||||||||||||||||| Sbjct: 473 ttggggcagtcacgggagaagtggccagactcgccgcag 435
>ref|XM_390462.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10286.1) partial mRNA Length = 558 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 289 ttggggcactcgcgggagaagtggccagactcgccgcag 327 |||||||| || |||||| |||||||||||||||||||| Sbjct: 479 ttggggcagtcacgggagtagtggccagactcgccgcag 441
>ref|XM_844348.1| PREDICTED: Canis familiaris similar to interferon regulatory factor 2 binding protein 2 (LOC488961), mRNA Length = 2928 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 326 aggagaagcagccgccaccgccgccgtcgccg 357 |||||||||||||||| ||||||||| ||||| Sbjct: 1379 aggagaagcagccgccgccgccgccgccgccg 1410
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 326 aggagaagcagccgccaccgccgccgtcgccg 357 ||||||||| |||||||||||||||| ||||| Sbjct: 7105074 aggagaagcggccgccaccgccgccgccgccg 7105105 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 28116086 gccgccaccgccgccgtcgccg 28116065 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 12114561 gccgccaccgccgccgtcgccg 12114540 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgcc 356 ||||||||||||||||||||| Sbjct: 8717121 gccgccaccgccgccgtcgcc 8717141
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 326 aggagaagcagccgccaccgccgccgtcgccg 357 ||||||||| |||||||||||||||| ||||| Sbjct: 125861 aggagaagcggccgccaccgccgccgccgccg 125892
>dbj|AK119955.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-C09, full insert sequence Length = 1151 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 326 aggagaagcagccgccaccgccgccgtcgccg 357 ||||||||| |||||||||||||||| ||||| Sbjct: 333 aggagaagcggccgccaccgccgccgccgccg 364
>ref|XM_479920.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 46.1 bits (23), Expect = 0.077 Identities = 56/67 (83%) Strand = Plus / Minus Query: 285 cttgttggggcactcgcgggagaagtggccagactcgccgcaggagaagcagccgccacc 344 |||| ||||||||||||| | || |||||| | |||||||||| | |||| ||||| || Sbjct: 674 cttgctggggcactcgcgagcgatgtggccggtctcgccgcagttgtagcacccgccgcc 615 Query: 345 gccgccg 351 ||||||| Sbjct: 614 gccgccg 608
>ref|XM_507115.1| PREDICTED Oryza sativa (japonica cultivar-group), P0582D05.112 mRNA Length = 984 Score = 46.1 bits (23), Expect = 0.077 Identities = 56/67 (83%) Strand = Plus / Minus Query: 285 cttgttggggcactcgcgggagaagtggccagactcgccgcaggagaagcagccgccacc 344 |||| ||||||||||||| | || |||||| | |||||||||| | |||| ||||| || Sbjct: 674 cttgctggggcactcgcgagcgatgtggccggtctcgccgcagttgtagcacccgccgcc 615 Query: 345 gccgccg 351 ||||||| Sbjct: 614 gccgccg 608
>ref|NM_190896.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 669 Score = 46.1 bits (23), Expect = 0.077 Identities = 26/27 (96%) Strand = Plus / Plus Query: 330 gaagcagccgccaccgccgccgtcgcc 356 |||||||||||||| |||||||||||| Sbjct: 315 gaagcagccgccacagccgccgtcgcc 341
>gb|BC041013.1| Homo sapiens CXXC finger 5, mRNA (cDNA clone MGC:13147 IMAGE:4139961), complete cds Length = 1819 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 456 agccgccaccgccgccgtcgccg 434
>gb|BC024040.1| Homo sapiens CXXC finger 5, mRNA (cDNA clone MGC:13084 IMAGE:3925666), complete cds Length = 1812 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 456 agccgccaccgccgccgtcgccg 434
>gb|BC017439.1| Homo sapiens cDNA clone MGC:12958 IMAGE:2989328, complete cds Length = 1782 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 427 agccgccaccgccgccgtcgccg 405
>gb|BC013025.1| Homo sapiens cDNA clone IMAGE:3528660, **** WARNING: chimeric clone **** Length = 2656 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 1386 agccgccaccgccgccgtcgccg 1364
>dbj|AB097032.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM08 Length = 1448 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 112 agccgccaccgccgccgtcgccg 90
>dbj|AB097005.1| Homo sapiens mRNA for putative NFkB activating protein, complete cds, clone: 102 Length = 1448 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 112 agccgccaccgccgccgtcgccg 90
>emb|CR614582.1| full-length cDNA clone CS0DF036YD16 of Fetal brain of Homo sapiens (human) Length = 1865 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 461 agccgccaccgccgccgtcgccg 439
>emb|CR611313.1| full-length cDNA clone CS0DB005YF17 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 2013 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 462 agccgccaccgccgccgtcgccg 440
>dbj|AK024338.1| Homo sapiens cDNA FLJ14276 fis, clone PLACE1005128 Length = 1871 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 535 agccgccaccgccgccgtcgccg 513
>ref|NM_016463.5| Homo sapiens CXXC finger 5 (CXXC5), mRNA Length = 2632 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 466 agccgccaccgccgccgtcgccg 444
>gb|BC050046.1| Homo sapiens, Similar to RIKEN cDNA 4930415K17 gene, clone IMAGE:4158283, mRNA Length = 1780 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 428 agccgccaccgccgccgtcgccg 406
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.077 Identities = 56/67 (83%) Strand = Plus / Plus Query: 285 cttgttggggcactcgcgggagaagtggccagactcgccgcaggagaagcagccgccacc 344 |||| ||||||||||||| | || |||||| | |||||||||| | |||| ||||| || Sbjct: 1638987 cttgctggggcactcgcgagcgatgtggccggtctcgccgcagttgtagcacccgccgcc 1639046 Query: 345 gccgccg 351 ||||||| Sbjct: 1639047 gccgccg 1639053 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 330 gaagcagccgccaccgccgccgtcgccg 357 ||||| |||||||||||||||| ||||| Sbjct: 10367671 gaagccgccgccaccgccgccgccgccg 10367698
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccgtcg 354 ||||||||||||||||||||||| Sbjct: 9330058 agcagccgccaccgccgccgtcg 9330036 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 17206925 gccgccaccgccgccgtcgccg 17206904
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.077 Identities = 26/27 (96%) Strand = Plus / Plus Query: 330 gaagcagccgccaccgccgccgtcgcc 356 |||||||||||||| |||||||||||| Sbjct: 33697636 gaagcagccgccacagccgccgtcgcc 33697662 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 30662991 gccgccaccgccgccgtcgccg 30663012 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 17440916 cgccaccgccgccgtcgccg 17440935 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||| ||||||||||||||| Sbjct: 10026016 cagccgccgccgccgccgtcgccg 10025993
>gb|AC113361.3| Homo sapiens chromosome 5 clone CTD-3224K15, complete sequence Length = 92323 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Plus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 63738 agccgccaccgccgccgtcgccg 63760
>dbj|AP004304.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0483E06 Length = 159035 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccgtcg 354 ||||||||||||||||||||||| Sbjct: 92902 agcagccgccaccgccgccgtcg 92880
>dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0004F07 Length = 135890 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccgtcg 354 ||||||||||||||||||||||| Sbjct: 926 agcagccgccaccgccgccgtcg 904
>dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699H05 Length = 144850 Score = 46.1 bits (23), Expect = 0.077 Identities = 26/27 (96%) Strand = Plus / Plus Query: 330 gaagcagccgccaccgccgccgtcgcc 356 |||||||||||||| |||||||||||| Sbjct: 50706 gaagcagccgccacagccgccgtcgcc 50732
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 46.1 bits (23), Expect = 0.077 Identities = 56/67 (83%) Strand = Plus / Plus Query: 285 cttgttggggcactcgcgggagaagtggccagactcgccgcaggagaagcagccgccacc 344 |||| ||||||||||||| | || |||||| | |||||||||| | |||| ||||| || Sbjct: 38487 cttgctggggcactcgcgagcgatgtggccggtctcgccgcagttgtagcacccgccgcc 38546 Query: 345 gccgccg 351 ||||||| Sbjct: 38547 gccgccg 38553
>dbj|AK101577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050L02, full insert sequence Length = 984 Score = 46.1 bits (23), Expect = 0.077 Identities = 56/67 (83%) Strand = Plus / Minus Query: 285 cttgttggggcactcgcgggagaagtggccagactcgccgcaggagaagcagccgccacc 344 |||| ||||||||||||| | || |||||| | |||||||||| | |||| ||||| || Sbjct: 674 cttgctggggcactcgcgagcgatgtggccggtctcgccgcagttgtagcacccgccgcc 615 Query: 345 gccgccg 351 ||||||| Sbjct: 614 gccgccg 608
>dbj|AK070034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A08, full insert sequence Length = 963 Score = 46.1 bits (23), Expect = 0.077 Identities = 56/67 (83%) Strand = Plus / Minus Query: 285 cttgttggggcactcgcgggagaagtggccagactcgccgcaggagaagcagccgccacc 344 |||| ||||||||||||| | || |||||| | |||||||||| | |||| ||||| || Sbjct: 674 cttgctggggcactcgcgagcgatgtggccggtctcgccgcagttgtagcacccgccgcc 615 Query: 345 gccgccg 351 ||||||| Sbjct: 614 gccgccg 608
>gb|BC006428.1| Homo sapiens CXXC finger 5, mRNA (cDNA clone MGC:12969 IMAGE:3343683), complete cds Length = 2632 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agccgccaccgccgccgtcgccg 357 ||||||||||||||||||||||| Sbjct: 466 agccgccaccgccgccgtcgccg 444
>ref|XM_478079.1| Oryza sativa (japonica cultivar-group), mRNA Length = 468 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 413 gccgccaccgccgccgtcgccg 392
>ref|XM_478078.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1218 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 56 gccgccaccgccgccgtcgccg 77
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 150298 gccgccaccgccgccgtcgccg 150319
>ref|XM_611424.2| PREDICTED: Bos taurus similar to CGG triplet repeat binding protein 1, transcript variant 1 (LOC539802), mRNA Length = 2608 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 180 gccgccaccgccgccgtcgccg 159
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 20631986 gccgccaccgccgccgtcgccg 20631965 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgcc 356 ||||||||||||||||||||| Sbjct: 34766153 gccgccaccgccgccgtcgcc 34766173 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 21355338 agcagccgccaccgccgccg 21355357
>gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genomic sequence, complete sequence Length = 152417 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 45743 gccgccaccgccgccgtcgccg 45722
>ref|NM_002911.3| Homo sapiens UPF1 regulator of nonsense transcripts homolog (yeast) (UPF1), mRNA Length = 5360 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 24 gccgccaccgccgccgtcgccg 3
>gb|AC139728.3| Carollia perspicillata clone 29G20, complete sequence Length = 125364 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tctgtgtcctcatcacagagac 77 |||||||||||||||||||||| Sbjct: 77211 tctgtgtcctcatcacagagac 77232
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 3687284 gccgccaccgccgccgtcgccg 3687305
>gb|DP000042.1| Lemur catta target 106 genomic scaffold Length = 452647 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccgtcgccg 357 |||||||||||||||||||| ||||| Sbjct: 97331 agcagccgccaccgccgccgccgccg 97356
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 18414933 gccgccaccgccgccgtcgccg 18414954 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 4429167 ccgccaccgccgccgtcgccg 4429147 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 24687282 cgccaccgccgccgtcgccg 24687263 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 ccgccaccgccgccgtcgcc 356 |||||||||||||||||||| Sbjct: 4876913 ccgccaccgccgccgtcgcc 4876894
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 20625015 gccgccaccgccgccgtcgccg 20624994 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgcc 356 ||||||||||||||||||||| Sbjct: 34856225 gccgccaccgccgccgtcgcc 34856245 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 21348367 agcagccgccaccgccgccg 21348386
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 1655289 gccgccaccgccgccgtcgccg 1655268 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgcc 356 ||||||||||||||||||||| Sbjct: 15063605 gccgccaccgccgccgtcgcc 15063625 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gaagcagccgccaccgccgccgtc 353 |||||||||||||| ||||||||| Sbjct: 16250203 gaagcagccgccacagccgccgtc 16250180
>gb|AC008207.3|AC008207 Drosophila melanogaster, chromosome 3R, region 96C-96D, BAC clone BACR17E12, complete sequence Length = 184887 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 tcgataacttagttcatccaat 41 |||||||||||||||||||||| Sbjct: 119356 tcgataacttagttcatccaat 119335
>gb|AC008208.5|AC008208 Drosophila melanogaster, chromosome 3R, region 96D-96D, BAC clone BACR06L08, complete sequence Length = 170220 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 tcgataacttagttcatccaat 41 |||||||||||||||||||||| Sbjct: 55298 tcgataacttagttcatccaat 55277
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 105268 gccgccaccgccgccgtcgccg 105289
>dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0640E12 Length = 167353 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 12050 gccgccaccgccgccgtcgccg 12029
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 92392 gccgccaccgccgccgtcgccg 92371
>dbj|AP005968.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1156C07 Length = 182153 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 163424 gccgccaccgccgccgtcgccg 163403
>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468A12 Length = 143018 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 57350 gccgccaccgccgccgtcgccg 57329
>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0009H10 Length = 175754 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 46992 gccgccaccgccgccgtcgccg 46971
>dbj|AK066346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061P09, full insert sequence Length = 1215 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 55 gccgccaccgccgccgtcgccg 76
>gb|AE003751.3| Drosophila melanogaster chromosome 3R, section 89 of 118 of the complete sequence Length = 307443 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 tcgataacttagttcatccaat 41 |||||||||||||||||||||| Sbjct: 59034 tcgataacttagttcatccaat 59013
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 18574334 gccgccaccgccgccgtcgccg 18574355 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 4437861 ccgccaccgccgccgtcgccg 4437841 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 24998952 cgccaccgccgccgtcgccg 24998933 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 ccgccaccgccgccgtcgcc 356 |||||||||||||||||||| Sbjct: 4895697 ccgccaccgccgccgtcgcc 4895678
>gb|AC004517.1|AC004517 Homo sapiens chromosome 19, cosmid F19807, complete sequence Length = 44062 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 31446 gccgccaccgccgccgtcgccg 31425
>gb|AC003972.1|AC003972 Homo sapiens DNA from chromosome 19, cosmid R33485 containing pNORF1, complete sequence Length = 42667 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgccg 357 |||||||||||||||||||||| Sbjct: 639 gccgccaccgccgccgtcgccg 618
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tctgtgtcctcatcacagagac 77 |||||||||||||||||||||| Sbjct: 630553 tctgtgtcctcatcacagagac 630574
>gb|AC006692.2| Caenorhabditis elegans cosmid T28F12, complete sequence Length = 51851 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 aagcagccgccaccgccgccg 351 ||||||||||||||||||||| Sbjct: 6315 aagcagccgccaccgccgccg 6295
>ref|XM_475359.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1707 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 326 aggagaagcagccgccaccgccgccgtcg 354 |||||||| ||||||| |||||||||||| Sbjct: 236 aggagaagaagccgccgccgccgccgtcg 264
>ref|XM_465424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1587 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgcc 356 ||||||||||||||||||||| Sbjct: 162 gccgccaccgccgccgtcgcc 182
>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05, complete sequence Length = 109853 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 94316 ccgccaccgccgccgtcgccg 94296
>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 66402 ccgccaccgccgccgtcgccg 66382
>gb|BT016623.1| Zea mays clone Contig456 mRNA sequence Length = 1039 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 286 ttgttggggcactcgcgggagaagtggcc 314 ||||||||||| |||||||||| |||||| Sbjct: 678 ttgttggggcagtcgcgggagatgtggcc 650
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 80530 ccgccaccgccgccgtcgccg 80510
>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research Institute) complete sequence Length = 236662 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||||||||||||| ||||| Sbjct: 182268 gcagccgccaccgccgccgccgccg 182244
>gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_D01, complete sequence Length = 112761 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 326 aggagaagcagccgccaccgccgccgtcg 354 |||||||| ||||||| |||||||||||| Sbjct: 102811 aggagaagaagccgccgccgccgccgtcg 102839
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgcc 356 ||||||||||||||||||||| Sbjct: 1839519 gccgccaccgccgccgtcgcc 1839539
>ref|XM_875034.1| PREDICTED: Bos taurus similar to CGG triplet repeat binding protein 1, transcript variant 4 (LOC539802), mRNA Length = 2449 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgcc 356 ||||||||||||||||||||| Sbjct: 21 gccgccaccgccgccgtcgcc 1
>gb|AC118545.20| Mus musculus strain C57BL/6J clone rp23-324o14 map 17, complete sequence Length = 236365 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gatctgtgtcctcatcacaga 74 ||||||||||||||||||||| Sbjct: 96287 gatctgtgtcctcatcacaga 96307
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgcc 356 ||||||||||||||||||||| Sbjct: 96497 gccgccaccgccgccgtcgcc 96477
>ref|XM_805532.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509127.59) partial mRNA Length = 786 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 547 ccgccaccgccgccgtcgccg 567
>ref|XM_812591.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508737.154) partial mRNA Length = 918 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 685 ccgccaccgccgccgtcgccg 705
>gb|AC005481.3| Homo sapiens PAC clone RP4-703P8 from 7, complete sequence Length = 118802 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gcagccgccaccgccgccgtc 353 ||||||||||||||||||||| Sbjct: 110162 gcagccgccaccgccgccgtc 110182
>gb|DQ249179.1| Homo sapiens isolate 495CLS7 haplotype HLA-B3801/HLA-Cw120301 genomic sequence Length = 338517 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 agataggaaaaggagcgaaggggaagggg 248 ||||||||| |||| |||||||||||||| Sbjct: 313453 agataggaagaggaacgaaggggaagggg 313481
>gb|DQ249176.1| Homo sapiens isolate 218CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic sequence Length = 363675 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 agataggaaaaggagcgaaggggaagggg 248 ||||||||| |||| |||||||||||||| Sbjct: 328876 agataggaagaggaacgaaggggaagggg 328904
>gb|DQ249175.1| Homo sapiens isolate 144CLS7 haplotype HLA-B3801/HLA-Cw120301 genomic sequence Length = 328871 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 agataggaaaaggagcgaaggggaagggg 248 ||||||||| |||| |||||||||||||| Sbjct: 314432 agataggaagaggaacgaaggggaagggg 314460
>gb|DQ249173.1| Homo sapiens isolate 135CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic sequence Length = 336776 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 agataggaaaaggagcgaaggggaagggg 248 ||||||||| |||| |||||||||||||| Sbjct: 307977 agataggaagaggaacgaaggggaagggg 308005
>gb|BC039817.1| Homo sapiens UPF1 regulator of nonsense transcripts homolog (yeast), mRNA (cDNA clone MGC:48687 IMAGE:5555509), complete cds Length = 5357 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgcc 356 ||||||||||||||||||||| Sbjct: 21 gccgccaccgccgccgtcgcc 1
>emb|AL805909.5| Human DNA sequence from clone DAQB-218D23 on chromosome 6 Contains the HCG22 gene for HLA complex group 22 and 1 CpG island, complete sequence Length = 85801 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 220 agataggaaaaggagcgaaggggaagggg 248 ||||||||| |||| |||||||||||||| Sbjct: 67484 agataggaagaggaacgaaggggaagggg 67456
>ref|NM_006164.2| Homo sapiens nuclear factor (erythroid-derived 2)-like 2 (NFE2L2), mRNA Length = 2439 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||||||||||||| ||||| Sbjct: 1 gcagccgccaccgccgccgccgccg 25
>gb|AE005952.1| Caulobacter crescentus CB15 section 278 of 359 of the complete genome Length = 13994 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gcagccgccaccgccgccgtc 353 ||||||||||||||||||||| Sbjct: 1884 gcagccgccaccgccgccgtc 1904
>dbj|AK005008.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300014P17 product:SIMILAR TO YY1-ASSOCIATED FACTOR 2 homolog [Mus musculus], full insert sequence Length = 1781 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||| ||||||||||||||| Sbjct: 43 gcagccgccgccgccgccgtcgccg 19
>dbj|AK011702.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610036M16 product:YY1 associated factor 2, full insert sequence Length = 1871 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||| ||||||||||||||| Sbjct: 60 gcagccgccgccgccgccgtcgccg 36
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 caggagaagcagccgccaccgccgc 349 ||||||||||||| ||||||||||| Sbjct: 21484454 caggagaagcagcagccaccgccgc 21484430 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 3148534 ccgccaccgccgccgtcgccg 3148514 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||| ||||||||||||||| Sbjct: 1721312 gcagccgccgccgccgccgtcgccg 1721288 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 cgccgcaggagaagcagccg 339 |||||||||||||||||||| Sbjct: 27227889 cgccgcaggagaagcagccg 27227908 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 26233798 agcagccgccaccgccgccg 26233817
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 326 aggagaagcagccgccaccgccgccgtcg 354 |||||||| ||||||| |||||||||||| Sbjct: 22148830 aggagaagaagccgccgccgccgccgtcg 22148858 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 15980651 ccgccaccgccgccgtcgccg 15980631 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 gaagcagccgccaccgccgc 349 |||||||||||||||||||| Sbjct: 19841329 gaagcagccgccaccgccgc 19841310 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 10256894 cagccgccaccgccgccgccgccg 10256871
>gb|AC156449.2| Volvox carteri clone JGIAOBO-37K9, complete sequence Length = 37976 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 329 agaagcagccgccaccgccgccgtcgccg 357 ||||||||||||| ||||||||| ||||| Sbjct: 3159 agaagcagccgccgccgccgccgccgccg 3131
>gb|AC079305.6| Homo sapiens BAC clone RP11-483K11 from 2, complete sequence Length = 184503 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||||||||||||| ||||| Sbjct: 158790 gcagccgccaccgccgccgccgccg 158766
>ref|NM_024189.4| Mus musculus YY1 associated factor 2 (Yaf2), mRNA Length = 2193 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||| ||||||||||||||| Sbjct: 49 gcagccgccgccgccgccgtcgccg 25
>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0533E11 Length = 150678 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgcc 356 ||||||||||||||||||||| Sbjct: 69386 gccgccaccgccgccgtcgcc 69406
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgcc 356 ||||||||||||||||||||| Sbjct: 132103 gccgccaccgccgccgtcgcc 132123
>dbj|AK111505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C11, full insert sequence Length = 1075 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 20 ccgccaccgccgccgtcgccg 40
>dbj|AB100453.1| Mus musculus YAF2 mRNA for YY1 associated factor-2-b, complete cds Length = 2262 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||| ||||||||||||||| Sbjct: 49 gcagccgccgccgccgccgtcgccg 25
>dbj|AB100452.1| Mus musculus YAF2 mRNA for YY1 associated factor-2-a, complete cds Length = 2193 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||| ||||||||||||||| Sbjct: 49 gcagccgccgccgccgccgtcgccg 25
>dbj|AK101945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074L17, full insert sequence Length = 2219 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 326 aggagaagcagccgccaccgccgccgtcg 354 |||||||| ||||||| |||||||||||| Sbjct: 481 aggagaagaagccgccgccgccgccgtcg 509
>gb|BC011558.1| Homo sapiens nuclear factor (erythroid-derived 2)-like 2, mRNA (cDNA clone MGC:20033 IMAGE:4548874), complete cds Length = 2439 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||||||||||||| ||||| Sbjct: 1 gcagccgccaccgccgccgccgccg 25
>gb|AY104445.1| Zea mays PCO063886 mRNA sequence Length = 540 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 286 ttgttggggcactcgcgggagaagtggcc 314 ||||||||||| |||||||||| |||||| Sbjct: 191 ttgttggggcagtcgcgggagatgtggcc 163
>gb|AC004196.1|AC004196 Homo sapiens clone UWGC:y24c079 from 6p21, complete sequence Length = 41308 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 agataggaaaaggagcgaaggggaagggg 248 ||||||||| |||| |||||||||||||| Sbjct: 18797 agataggaagaggaacgaaggggaagggg 18825
>gb|AC091777.26| Mus musculus strain C57BL/6J chromosome 17 clone rp23-355b17, complete sequence Length = 216109 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gatctgtgtcctcatcacaga 74 ||||||||||||||||||||| Sbjct: 197660 gatctgtgtcctcatcacaga 197680
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 caggagaagcagccgccaccgccgc 349 ||||||||||||| ||||||||||| Sbjct: 21412775 caggagaagcagcagccaccgccgc 21412751 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 3148479 ccgccaccgccgccgtcgccg 3148459 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||| ||||||||||||||| Sbjct: 1721288 gcagccgccgccgccgccgtcgccg 1721264 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 cgccgcaggagaagcagccg 339 |||||||||||||||||||| Sbjct: 27153489 cgccgcaggagaagcagccg 27153508 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 26161974 agcagccgccaccgccgccg 26161993
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 6309 ccgccaccgccgccgtcgccg 6329
>emb|AL713906.3|CNS07YQ6 Oryza sativa chromosome 12, . BAC OJ1587_D05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 90756 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 ccgccaccgccgccgtcgccg 357 ||||||||||||||||||||| Sbjct: 69130 ccgccaccgccgccgtcgccg 69150
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||| ||||||||||||||| Sbjct: 119172 gcagccgccgccgccgccgtcgccg 119196
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||| ||||||||||||||| Sbjct: 45609 gcagccgccgccgccgccgtcgccg 45633
>gb|AC127360.3| Mus musculus BAC clone RP23-125F9 from 15, complete sequence Length = 192315 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 333 gcagccgccaccgccgccgtcgccg 357 ||||||||| ||||||||||||||| Sbjct: 147959 gcagccgccgccgccgccgtcgccg 147983
>ref|NM_010900.1| Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein (Nfatc2ip), mRNA Length = 3390 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccgtcgc 355 |||||||||| ||||||||||||| Sbjct: 341 agcagccgccgccgccgccgtcgc 318
>gb|BC080541.1| Homo sapiens receptor tyrosine kinase-like orphan receptor 1, mRNA (cDNA clone IMAGE:5477978), complete cds Length = 2308 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 32 agcagccgccaccgccgccg 51
>ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||| ||||||||||||||| Sbjct: 208 cagccgccgccgccgccgtcgccg 231
>ref|XM_465604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 842 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gaagcagccgccaccgccgccgtc 353 |||||||||||||| ||||||||| Sbjct: 370 gaagcagccgccacagccgccgtc 347
>ref|NM_193709.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 498 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 50 cgccaccgccgccgtcgccg 69
>ref|XM_515935.1| PREDICTED: Pan troglodytes similar to Alkyldihydroxyacetonephosphate synthase, peroxisomal precursor (Alkyl-DHAP synthase) (Alkylglycerone-phosphate synthase) (LOC459770), mRNA Length = 1791 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 gcagccgccaccgccgccgtcgcc 356 ||||||||||||||||||| |||| Sbjct: 1084 gcagccgccaccgccgccgccgcc 1061
>gb|BC056470.1| Mus musculus expressed sequence AW547186, mRNA (cDNA clone MGC:67308 IMAGE:5706838), complete cds Length = 5167 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 30 agcagccgccaccgccgccg 11
>ref|NM_177592.3| Mus musculus expressed sequence AW547186 (AW547186), mRNA Length = 5167 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 30 agcagccgccaccgccgccg 11
>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12, complete sequence Length = 173073 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ccgccaccgccgccgtcgcc 356 |||||||||||||||||||| Sbjct: 117980 ccgccaccgccgccgtcgcc 117999
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 48249 agcagccgccaccgccgccg 48268
>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0014K18, complete sequence Length = 123508 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 gaagcagccgccaccgccgc 349 |||||||||||||||||||| Sbjct: 93953 gaagcagccgccaccgccgc 93934
>gb|AC125322.4| Mus musculus BAC clone RP23-407J24 from chromosome 7, complete sequence Length = 217912 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccgtcgc 355 |||||||||| ||||||||||||| Sbjct: 54956 agcagccgccgccgccgccgtcgc 54979
>ref|NM_005012.1| Homo sapiens receptor tyrosine kinase-like orphan receptor 1 (ROR1), mRNA Length = 3358 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 8 agcagccgccaccgccgccg 27
>gb|AC137607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0006O14, complete sequence Length = 142764 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 40459 cagccgccaccgccgccgccgccg 40436
>gb|AY251054.1| Anthurium andraeanum cysteine protease mRNA, complete cds Length = 1814 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 1239 cgccaccgccgccgtcgccg 1258
>ref|XM_358311.5| PREDICTED: Mus musculus zinc finger, SWIM domain containing 6 (Zswim6), mRNA Length = 5452 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||| ||||||||||||||| Sbjct: 519 cagccgccgccgccgccgtcgccg 542
>emb|AM084381.1| Ovis aries mRNA for furin (fur gene) Length = 2447 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 2063 agcagccgccaccgccgccg 2082
>emb|CT010549.2| Xenopus tropicalis finished cDNA, clone TEgg140l16 Length = 1710 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 aagcagccgccaccgccgcc 350 |||||||||||||||||||| Sbjct: 262 aagcagccgccaccgccgcc 281
>gb|BC033513.1| Homo sapiens cDNA clone IMAGE:5172161, partial cds Length = 1252 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 382 cagccgccaccgccgccgccgccg 405
>ref|XM_845414.1| PREDICTED: Canis familiaris similar to Forkhead box protein B2 (Transcription factor FKH-4) (LOC608385), mRNA Length = 1278 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 687 agcagccgccaccgccgccg 668
>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0090F16, complete sequence Length = 147341 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 135206 cgccaccgccgccgtcgccg 135225
>emb|AL390059.10| Human DNA sequence from clone RP11-399E10 on chromosome 4, complete sequence Length = 200379 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 196684 cagccgccaccgccgccgccgccg 196661
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 3601072 cgccaccgccgccgtcgccg 3601053
>ref|NM_002111.6| Homo sapiens huntingtin (Huntington disease) (HD), mRNA Length = 13481 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 263 cagccgccaccgccgccgccgccg 286
>emb|AL161742.7| Human DNA sequence from clone RP4-597J3 on chromosome 1p32.1-32.3 Contains the 5' end of the ROR1 gene for receptor tyrosine kinase-like orphan receptor 1, a ribosomal protein L19 (RPL19) pseudogene, a cofilin 1 (non-muscle) (CFL1) pseudogene and a CpG island, complete sequence Length = 114409 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 25276 agcagccgccaccgccgccg 25295
>emb|AL139339.22| Human DNA sequence from clone RP11-225H22 on chromosome 10 Contains the 3' end of the PDCD11 gene for programmed cell death 11, the 5' end of the NEURL gene for neuralized-like (Drosophila), two novel genes, the FAM26A gene for family with sequence similarity 26, member A, the FAM26B gene for family with sequence similarity 26, member B, the FAM26C gene for family with sequence similarity 26, member C and three CpG islands, complete sequence Length = 103826 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 atctgtgtcctcatcacaga 74 |||||||||||||||||||| Sbjct: 7043 atctgtgtcctcatcacaga 7062
>emb|CR859921.1| Pongo pygmaeus mRNA; cDNA DKFZp469B1714 (from clone DKFZp469B1714) Length = 4373 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgc 355 |||||||||||||||||||| Sbjct: 33 gccgccaccgccgccgtcgc 14
>emb|CR859126.1| Pongo pygmaeus mRNA; cDNA DKFZp459P2028 (from clone DKFZp459P2028) Length = 4369 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gccgccaccgccgccgtcgc 355 |||||||||||||||||||| Sbjct: 34 gccgccaccgccgccgtcgc 15
>emb|CR592273.1| full-length cDNA clone CL0BA009ZG11 of Placenta of Homo sapiens (human) Length = 1160 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 47 cagccgccaccgccgccgccgccg 24
>gb|AE006004.1| Caulobacter crescentus CB15 section 330 of 359 of the complete genome Length = 14710 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 320 cgccgcaggagaagcagccgccaccgccgccg 351 |||||| |||||| | |||||||||||||||| Sbjct: 10880 cgccgccggagaaaccgccgccaccgccgccg 10849
>gb|L12392.1|HUMHDA Homo sapiens Huntington's Disease (HD) mRNA, complete cds Length = 10348 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 433 cagccgccaccgccgccgccgccg 456
>ref|NM_206564.1| Drosophila melanogaster CG5794-RE, transcript variant E (CG5794), mRNA Length = 8834 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 4794 agcagccgccaccgccgccg 4813
>ref|NM_170158.1| Drosophila melanogaster CG5794-RB, transcript variant B (CG5794), mRNA Length = 11769 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 4601 agcagccgccaccgccgccg 4620
>ref|NM_143018.2| Drosophila melanogaster CG5794-RD, transcript variant D (CG5794), mRNA Length = 11962 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 4794 agcagccgccaccgccgccg 4813
>dbj|AK152040.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830045O14 product:nuclear factor, erythroid derived 2,-like 1, full insert sequence Length = 3883 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 68 cgccaccgccgccgtcgccg 49
>dbj|AK153529.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830170O18 product:nuclear factor, erythroid derived 2,-like 1, full insert sequence Length = 3884 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 68 cgccaccgccgccgtcgccg 49
>ref|XM_945535.1| PREDICTED: Homo sapiens hypothetical protein LOC652467 (LOC652467), mRNA Length = 453 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 187 agcagccgccaccgccgccg 168
>ref|XM_933368.1| PREDICTED: Homo sapiens hypothetical protein LOC646051 (LOC646051), mRNA Length = 453 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 187 agcagccgccaccgccgccg 168
>dbj|AK166488.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930029H02 product:hypothetical protein, full insert sequence Length = 1734 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 34 agcagccgccaccgccgccg 15
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 aaaataacttggatctttaa 102 |||||||||||||||||||| Sbjct: 367400 aaaataacttggatctttaa 367381
>gb|BC113761.1| Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein, mRNA (cDNA clone MGC:130564 IMAGE:40054445), complete cds Length = 2327 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccgtcgc 355 |||||||||| ||||||||||||| Sbjct: 340 agcagccgccgccgccgccgtcgc 317
>gb|S83377.1| IT15=Huntington disease HD gene {CAG and CCG repeat region} [gorilla, white blood cells, Genomic, 162 nt] Length = 162 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 28 cagccgccaccgccgccgccgccg 51
>gb|BC097334.1| Rattus norvegicus early growth response 3, mRNA (cDNA clone MGC:114342 IMAGE:7456458), complete cds Length = 2569 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 227 cagccgccaccgccgccgccgccg 204
>gb|AY702460.1|AY702460S1 Oxyuranus scutellatus scutellatus clone R13 venom oncogene mRNA, partial cds Length = 736 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 178 cagccgccaccgccgccgccgccg 201
>dbj|AK077216.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933434K12 product:unclassifiable, full insert sequence Length = 1889 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccgtcgc 355 |||||||||| ||||||||||||| Sbjct: 542 agcagccgccgccgccgccgtcgc 565
>dbj|AK005947.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700013F11 product:nuclear factor of activated T-cells, cytoplasmic 2 interacting protein, full insert sequence Length = 1354 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccgtcgc 355 |||||||||| ||||||||||||| Sbjct: 330 agcagccgccgccgccgccgtcgc 307
>gb|BC105159.1| Bos taurus proline-rich nuclear receptor coactivator 1, mRNA (cDNA clone MGC:127914 IMAGE:7962707), complete cds Length = 1783 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 62 agcagccgccaccgccgccg 81
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 ccgccaccgccgccgtcgcc 356 |||||||||||||||||||| Sbjct: 769050 ccgccaccgccgccgtcgcc 769031
>dbj|AK030107.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932442G09 product:nuclear factor of activated T-cells, cytoplasmic 2 interacting protein, full insert sequence Length = 3390 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccgtcgc 355 |||||||||| ||||||||||||| Sbjct: 341 agcagccgccgccgccgccgtcgc 318
>gb|AC008237.4|AC008237 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR47D16, complete sequence Length = 200216 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 177041 agcagccgccaccgccgccg 177022
>gb|AC009916.5|AC009916 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR35N03, complete sequence Length = 169271 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 98342 agcagccgccaccgccgccg 98361
>gb|L27350.1|HUMHD01 Homo sapiens huntingtin (HD) gene, exon 1 Length = 614 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 433 cagccgccaccgccgccgccgccg 456
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 ggagaagcagccgccaccgccgcc 350 |||||||| ||||||||||||||| Sbjct: 6410954 ggagaagccgccgccaccgccgcc 6410977
>gb|AC007040.2|AC007040 Homo sapiens BAC clone RP11-298H3 from 2, complete sequence Length = 181671 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 142996 cagccgccaccgccgccgccgccg 143019
>gb|AF160490.1|AF160490S1 Sylvilagus floridanus transcription factor p64 (c-myc) gene, exon 2 Length = 760 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 327 ggagaagcagccgccaccgccgccgtcg 354 |||||||| |||||| |||||||||||| Sbjct: 285 ggagaagctgccgccgccgccgccgtcg 258
>ref|NM_144582.2| Homo sapiens testis expressed sequence 261 (TEX261), mRNA Length = 3381 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 48 cagccgccaccgccgccgccgccg 25
>ref|XM_224852.3| PREDICTED: Rattus norvegicus spinelinin (LOC306459), mRNA Length = 4602 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 303 cgccaccgccgccgtcgccg 322
>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F09 Length = 132713 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||| ||||||||||||||| Sbjct: 106298 cagccgccgccgccgccgtcgccg 106275
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 94308 cgccaccgccgccgtcgccg 94327
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gccgccaccgccgccgtcgc 355 |||||||||||||||||||| Sbjct: 3256816 gccgccaccgccgccgtcgc 3256835
>dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487H05 Length = 176057 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gaagcagccgccaccgccgccgtc 353 |||||||||||||| ||||||||| Sbjct: 84690 gaagcagccgccacagccgccgtc 84667
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091D16 Length = 174222 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 330 gaagcagccgccaccgccgccgtcgccg 357 ||||| |||||||||||||||| ||||| Sbjct: 68629 gaagccgccgccaccgccgccgccgccg 68656
>dbj|AK110851.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-C06, full insert sequence Length = 1021 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 cgccgcaggagaagcagccg 339 |||||||||||||||||||| Sbjct: 254 cgccgcaggagaagcagccg 235
>dbj|AK101464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040H13, full insert sequence Length = 1406 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 2 agcagccgccaccgccgccg 21
>dbj|AK100540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102H11, full insert sequence Length = 2826 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gaagcagccgccaccgccgccgtc 353 |||||||||||||| ||||||||| Sbjct: 376 gaagcagccgccacagccgccgtc 353
>gb|AF121865.1|AF121865 Streptomyces avermitilis endo-1,4-beta-xylanase (xyl30) gene, complete cds Length = 2524 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 1178 cgccaccgccgccgtcgccg 1159
>dbj|AK066609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073O12, full insert sequence Length = 843 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gaagcagccgccaccgccgccgtc 353 |||||||||||||| ||||||||| Sbjct: 370 gaagcagccgccacagccgccgtc 347
>dbj|AK063753.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A03, full insert sequence Length = 1415 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 1 agcagccgccaccgccgccg 20
>gb|AE003748.3| Drosophila melanogaster chromosome 3R, section 86 of 118 of the complete sequence Length = 253272 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 187736 agcagccgccaccgccgccg 187717
>emb|AJ617740.1| Pseudomonas putida clc transposon Length = 105027 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 63045 cgccaccgccgccgtcgccg 63064
>gb|AC005516.1|AC005516 Homo sapiens Chromosome 4p16.3 BAC clone 399e10 containing Huntington's Disease gene; exons 1-67, complete sequence Length = 200348 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 196653 cagccgccaccgccgccgccgccg 196630
>gb|U76759.1|MMU76759 Mus musculus nuclear protein NIP45 mRNA, complete cds Length = 1946 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccgtcgc 355 |||||||||| ||||||||||||| Sbjct: 329 agcagccgccgccgccgccgtcgc 306
>gb|L49359.1|HUMHUNTPEA Homo sapiens huntingtin gene, partial exon Length = 216 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 79 cagccgccaccgccgccgccgccg 102
>gb|L49366.1|GORHUNTPEC Gorilla gorilla huntingtin gene, partial exon Length = 174 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 34 cagccgccaccgccgccgccgccg 57
>gb|L49364.1|GORHUNTPEB Gorilla gorilla huntingtin gene, partial exon Length = 171 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 37 cagccgccaccgccgccgccgccg 60
>gb|L49361.1|GORHUNTPEA Gorilla gorilla huntingtin gene, partial exon Length = 171 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 34 cagccgccaccgccgccgccgccg 57
>gb|L49362.1|GIBHUNTPEA Hylobates lar huntingtin gene, partial exon Length = 159 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 31 cagccgccaccgccgccgccgccg 54
>gb|L49363.1|CHPHUNTPEC Pan paniscus huntingtin gene, partial exon Length = 165 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 34 cagccgccaccgccgccgccgccg 57
>gb|L49360.1|CHPHUNTPEB Pan paniscus huntingtin gene, partial exon Length = 165 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 37 cagccgccaccgccgccgccgccg 60
>gb|L49358.1|CHPHUNTPEA Pan troglodytes huntingtin gene, partial exon Length = 174 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 43 cagccgccaccgccgccgccgccg 66
>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146585 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 cgccgcaggagaagcagccg 339 |||||||||||||||||||| Sbjct: 40921 cgccgcaggagaagcagccg 40940
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 124036 agcagccgccaccgccgccg 124055
>gb|BC099895.1| Mus musculus cDNA clone IMAGE:6849856, containing frame-shift errors Length = 4680 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 49 cgccaccgccgccgtcgccg 30
>ref|NM_001034308.1| Bos taurus proline-rich nuclear receptor coactivator 1 (PNRC1), mRNA Length = 1783 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 62 agcagccgccaccgccgccg 81
>gb|L34020.1|HUMHD1A Homo sapiens (clone E4.1) Huntington disease (HD) gene, exon 1 Length = 4105 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 3696 cagccgccaccgccgccgccgccg 3719
>emb|AL596384.17| Mouse DNA sequence from clone RP23-353J21 on chromosome 11, complete sequence Length = 219695 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 48639 cgccaccgccgccgtcgccg 48658
>emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chromosome X, complete sequence Length = 230186 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 164692 agcagccgccaccgccgccg 164673
>emb|AJ277444.1|MMU277444 Mus musculus Tcf11 gene for bZIP transcription factor, 5' UTR, exons 1a, 1b and 2 Length = 4339 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgccaccgccgccgtcgccg 357 |||||||||||||||||||| Sbjct: 2316 cgccaccgccgccgtcgccg 2297
>gb|M97675.1|HUMROR1A Human transmembrane receptor (ror1) mRNA, complete cds Length = 3358 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 8 agcagccgccaccgccgccg 27
>emb|AJ291307.1|OCU291307 Oryctolagus cuniculus partial mRNA for c-myc transcription factor (c-myc gene) Length = 355 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 327 ggagaagcagccgccaccgccgccgtcg 354 |||||||| |||||| |||||||||||| Sbjct: 261 ggagaagctgccgccgccgccgccgtcg 234
>gb|BC006374.1| Homo sapiens receptor tyrosine kinase-like orphan receptor 1, mRNA (cDNA clone IMAGE:4139193), with apparent retained intron Length = 2311 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 agcagccgccaccgccgccg 351 |||||||||||||||||||| Sbjct: 33 agcagccgccaccgccgccg 52
>emb|Z68756.1|HSL191F1 Human DNA sequence from clone LA04NC01-191F1 on chromosome 4, complete sequence Length = 40592 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 13813 cagccgccaccgccgccgccgccg 13790
>gb|AC165250.2| Mus musculus BAC clone RP24-209D3 from chromosome 13, complete sequence Length = 173581 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||| ||||||||||||||| Sbjct: 97236 cagccgccgccgccgccgtcgccg 97259
>dbj|AB016794.1| Homo sapiens mRNA for huntingtin, complete cds Length = 13467 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||||||||||||| ||||| Sbjct: 263 cagccgccaccgccgccgccgccg 286
>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0036E02 Length = 145931 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cagccgccaccgccgccgtcgccg 357 |||||||| ||||||||||||||| Sbjct: 120509 cagccgccgccgccgccgtcgccg 120486 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,180,322 Number of Sequences: 3902068 Number of extensions: 3180322 Number of successful extensions: 117561 Number of sequences better than 10.0: 206 Number of HSP's better than 10.0 without gapping: 225 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112411 Number of HSP's gapped (non-prelim): 5140 length of query: 357 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 335 effective length of database: 17,147,199,772 effective search space: 5744311923620 effective search space used: 5744311923620 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
