Clone Name | rbart46a11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC007947.5|AC007947 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone BACR11O03, complete sequence Length = 168505 Score = 42.1 bits (21), Expect = 0.35 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cagcccactgaacatggaaca 51 ||||||||||||||||||||| Sbjct: 55238 cagcccactgaacatggaaca 55258
>gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 105 of 118 of the complete sequence Length = 231562 Score = 42.1 bits (21), Expect = 0.35 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cagcccactgaacatggaaca 51 ||||||||||||||||||||| Sbjct: 217443 cagcccactgaacatggaaca 217463
>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10, complete sequence Length = 138209 Score = 38.2 bits (19), Expect = 5.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 91 acagaggacacccgatacattcg 113 |||||||||| |||||||||||| Sbjct: 119331 acagaggacagccgatacattcg 119353
>gb|BC072305.1| Xenopus laevis similar to keratin 18, mRNA (cDNA clone MGC:82575 IMAGE:4970156), complete cds Length = 1396 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tcccacctaccacagagga 98 ||||||||||||||||||| Sbjct: 82 tcccacctaccacagagga 64
>gb|BC042269.1| Xenopus laevis similar to keratin 18, mRNA (cDNA clone IMAGE:5572092), partial cds Length = 1393 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tcccacctaccacagagga 98 ||||||||||||||||||| Sbjct: 74 tcccacctaccacagagga 56
>gb|BC054993.1| Xenopus laevis keratin 18, mRNA (cDNA clone MGC:64569 IMAGE:6880371), complete cds Length = 1443 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tcccacctaccacagagga 98 ||||||||||||||||||| Sbjct: 108 tcccacctaccacagagga 90
>gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosome 17, complete sequence Length = 181626 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 cctaccacagaggacaccc 103 ||||||||||||||||||| Sbjct: 146070 cctaccacagaggacaccc 146052
>emb|AL773507.7| Mouse DNA sequence from clone RP23-322E14 on chromosome 4 Contains a phospholipase A2, group XIIA (Pla2g12) pseudogene, complete sequence Length = 200646 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 catcccacctaccacagag 96 ||||||||||||||||||| Sbjct: 116324 catcccacctaccacagag 116342
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 5.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 91 acagaggacacccgatacattcg 113 |||||||||| |||||||||||| Sbjct: 7682936 acagaggacagccgatacattcg 7682958
>gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosome 17, complete sequence Length = 206481 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 cctaccacagaggacaccc 103 ||||||||||||||||||| Sbjct: 28599 cctaccacagaggacaccc 28581
>emb|AL773561.7| Mouse DNA sequence from clone RP23-71D9 on chromosome X, complete sequence Length = 174072 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 acagcccactgaacatgga 48 ||||||||||||||||||| Sbjct: 56815 acagcccactgaacatgga 56797
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 acacccgatacattcgtac 116 ||||||||||||||||||| Sbjct: 477227 acacccgatacattcgtac 477209
>gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, complete sequence Length = 239743 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 67 aatcagggggacatcccac 85 ||||||||||||||||||| Sbjct: 27706 aatcagggggacatcccac 27688 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 649,076 Number of Sequences: 3902068 Number of extensions: 649076 Number of successful extensions: 38730 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38696 Number of HSP's gapped (non-prelim): 34 length of query: 119 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 98 effective length of database: 17,151,101,840 effective search space: 1680807980320 effective search space used: 1680807980320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)