Clone Name | rbart46a09 |
---|---|
Clone Library Name | barley_pub |
>gb|AC154613.3| Mus musculus BAC clone RP23-338M12 from chromosome 13, complete sequence Length = 200093 Score = 42.1 bits (21), Expect = 0.78 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 atgtgatgttttacatacagt 81 ||||||||||||||||||||| Sbjct: 97627 atgtgatgttttacatacagt 97607
>gb|AC124980.7| Mus musculus chromosome 13, clone RP24-133J11, complete sequence Length = 215331 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 caccaggaaaaggagtgttc 200 |||||||||||||||||||| Sbjct: 23990 caccaggaaaaggagtgttc 24009
>gb|AC162307.5| Mus musculus BAC clone RP23-271I2 from chromosome 18, complete sequence Length = 196879 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tgtcatctgcagcagaatct 145 |||||||||||||||||||| Sbjct: 113320 tgtcatctgcagcagaatct 113339
>gb|AC163089.3| Mus musculus chromosome 5, clone RP23-346P15, complete sequence Length = 197826 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 actggaaattacagattttt 165 |||||||||||||||||||| Sbjct: 8591 actggaaattacagattttt 8610
>gb|AC067964.18| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-337K7, complete sequence Length = 219769 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 actggaaattacagattttt 165 |||||||||||||||||||| Sbjct: 152284 actggaaattacagattttt 152303
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tgccaacccgaatctggggg 31 |||||||||||||||||||| Sbjct: 2235377 tgccaacccgaatctggggg 2235396
>dbj|AK015658.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930500F04 product:unclassifiable, full insert sequence Length = 577 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 actggaaattacagattttt 165 |||||||||||||||||||| Sbjct: 520 actggaaattacagattttt 501
>gb|AC125238.5| Homo sapiens BAC clone RP11-711C24 from 2, complete sequence Length = 196622 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttccatatgtgatgttttac 74 |||||||||||||||||||| Sbjct: 50149 ttccatatgtgatgttttac 50168
>gb|AC069314.5| Homo sapiens BAC clone CTD-2300I22 from 2, complete sequence Length = 104906 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttccatatgtgatgttttac 74 |||||||||||||||||||| Sbjct: 95696 ttccatatgtgatgttttac 95715
>gb|AC174459.2| Mus musculus BAC clone RP23-358J23 from chromosome 13, complete sequence Length = 229410 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 caccaggaaaaggagtgttc 200 |||||||||||||||||||| Sbjct: 40682 caccaggaaaaggagtgttc 40663
>gb|AC154390.1| Mus musculus BAC clone RP23-10G24 from 13, complete sequence Length = 190233 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 caccaggaaaaggagtgttc 200 |||||||||||||||||||| Sbjct: 132039 caccaggaaaaggagtgttc 132058
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tgccaacccgaatctggggg 31 |||||||||||||||||||| Sbjct: 2081653 tgccaacccgaatctggggg 2081634 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,656,443 Number of Sequences: 3902068 Number of extensions: 2656443 Number of successful extensions: 42160 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42136 Number of HSP's gapped (non-prelim): 24 length of query: 241 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 219 effective length of database: 17,147,199,772 effective search space: 3755236750068 effective search space used: 3755236750068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)