>OXAA_CLOAB (Q97CW0) Membrane protein oxaA|
          Length = 254

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = +3

Query: 156 FNRTKLEPISPSILTIFCYRLAKLVVH*HPSVHTPGVGWVYIHNLGCETTGTRVHRFTRW 335
           +    + P    +L I  Y +   + +   S+H  G+G+++IH+L  + T      F+ W
Sbjct: 91  YKEKNVNPFGGCLLLIIQYPILIALYYVFYSLHIKGIGFLWIHDLSQKAT------FSNW 144

Query: 336 T 338
           T
Sbjct: 145 T 145

>LMRB_LISMO (Q8Y9K8) Lincomycin resistance protein lmrB|
          Length = 471

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 176 FQLCSVEIGWVVTSSVLESGSKVKLNNLWLYW-KDRTLACLALARSVAATFI 24
           F + S  + W+ T  +L  G  V ++ L L W   R L   A++ S+A T I
Sbjct: 45  FDISSATVQWLTTGYLLTLGILVPISGLLLQWFTTRGLFFTAVSFSIAGTLI 96

>LMRB_LISIN (Q92EE1) Lincomycin resistance protein lmrB|
          Length = 471

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 176 FQLCSVEIGWVVTSSVLESGSKVKLNNLWLYW-KDRTLACLALARSVAATFI 24
           F + S  + W+ T  +L  G  V ++ L L W   R L   A++ S+A T I
Sbjct: 45  FDISSATVQWLTTGYLLTLGILVPISGLLLQWFTTRGLFFTAVSFSIAGTLI 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,235,847
Number of Sequences: 219361
Number of extensions: 1576944
Number of successful extensions: 3552
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3552
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)