>emb|Z54354.1|SPAC2G11 S.pombe chromosome I cosmid c2G11
          Length = 36162

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 90   ccagagattgttcaacttcacc 111
            ||||||||||||||||||||||
Sbjct: 6890 ccagagattgttcaacttcacc 6911

>ref|NM_001018481.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC2G11.03c),
            partial mRNA
          Length = 1677

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 90   ccagagattgttcaacttcacc 111
            ||||||||||||||||||||||
Sbjct: 1072 ccagagattgttcaacttcacc 1051

>gb|AC138460.4| Mus musculus BAC clone RP23-295A7 from 8, complete sequence
          Length = 186258

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 123    ttccagcacagatgaagtcact 144
              ||||||||||||||||||||||
Sbjct: 173363 ttccagcacagatgaagtcact 173342

>gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome 8, complete sequence
          Length = 222867

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 123   ttccagcacagatgaagtcact 144
             ||||||||||||||||||||||
Sbjct: 53020 ttccagcacagatgaagtcact 52999

>ref|NM_102639.2| Arabidopsis thaliana unknown protein AT1G28760 mRNA, complete cds
          Length = 1431

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 23  aaataaatgtagcagcaacagaacg 47
           ||||||| |||||||||||||||||
Sbjct: 892 aaataaacgtagcagcaacagaacg 868

>gb|AF116520.1|AF116519S2 Mus musculus periplakin (ppl) gene, exons 2 through 14
          Length = 18583

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 153  aatttcaacagaacaaagttg 173
            |||||||||||||||||||||
Sbjct: 7198 aatttcaacagaacaaagttg 7218

>gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome 16, complete sequence
          Length = 233527

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    aatttcaacagaacaaagttg 173
              |||||||||||||||||||||
Sbjct: 189950 aatttcaacagaacaaagttg 189970

>gb|AC127246.3| Mus musculus BAC clone RP24-424L20 from chromosome 16, complete sequence
          Length = 181475

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 153    aatttcaacagaacaaagttg 173
              |||||||||||||||||||||
Sbjct: 112577 aatttcaacagaacaaagttg 112557

>gb|AC163723.3| Mus musculus BAC clone RP23-450O11 from chromosome 16, complete sequence
          Length = 181338

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 153    aatttcaacagaacaaagttg 173
              |||||||||||||||||||||
Sbjct: 160865 aatttcaacagaacaaagttg 160845

>gb|AC097523.4| Homo sapiens BAC clone RP11-597P14 from 2, complete sequence
          Length = 108711

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 265   tggggtgggtttatatacaca 285
             |||||||||||||||||||||
Sbjct: 14636 tggggtgggtttatatacaca 14616

>gb|AC007508.2|AC007508 Genomic sequence for Arabidopsis thaliana BAC F1K23 from chromosome I,
             complete sequence
          Length = 101305

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 23    aaataaatgtagcagcaacagaacg 47
             ||||||| |||||||||||||||||
Sbjct: 28102 aaataaacgtagcagcaacagaacg 28126

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 176     accgatttcgccaagcatctt 196
               |||||||||||||||||||||
Sbjct: 4112179 accgatttcgccaagcatctt 4112199

>emb|AL117195.1|CEY57A10A Caenorhabditis elegans YAC Y57A10A, complete sequence
          Length = 165339

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 152    caatttcaacagaacaaagttggaa 176
              |||||||||||||||||||| ||||
Sbjct: 122091 caatttcaacagaacaaagtaggaa 122115

>gb|AC125012.12| Mus musculus chromosome 7, clone RP24-143K11, complete sequence
          Length = 141809

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 57    cagacaggccaaggttctatcttt 80
             |||||||||||||||| |||||||
Sbjct: 65336 cagacaggccaaggttttatcttt 65313

>gb|BC010459.1| Mus musculus nucleobindin 2, mRNA (cDNA clone MGC:5832
           IMAGE:3585076), complete cds
          Length = 1598

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 57  cagacaggccaaggttctatcttt 80
           |||||||||||||||| |||||||
Sbjct: 198 cagacaggccaaggttttatcttt 175

>ref|NM_016773.1| Mus musculus nucleobindin 2 (Nucb2), mRNA
          Length = 1655

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 57  cagacaggccaaggttctatcttt 80
           |||||||||||||||| |||||||
Sbjct: 284 cagacaggccaaggttttatcttt 261

>gb|AC163222.4| Mus musculus chromosome 7, clone RP24-157O12, complete sequence
          Length = 180557

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 57     cagacaggccaaggttctatcttt 80
              |||||||||||||||| |||||||
Sbjct: 147567 cagacaggccaaggttttatcttt 147544

>gb|AC147070.5| Homo sapiens chromosome 4 clone RP13-1008F15, complete sequence
          Length = 153296

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     aagaagctaaataaatgtag 34
              ||||||||||||||||||||
Sbjct: 148205 aagaagctaaataaatgtag 148224

>gb|AC147055.2| Homo sapiens BAC clone RP11-1267H10 from 4, complete sequence
          Length = 184963

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aagaagctaaataaatgtag 34
             ||||||||||||||||||||
Sbjct: 19048 aagaagctaaataaatgtag 19029

>gb|AC126459.3| Mus musculus BAC clone RP23-181A8 from chromosome 9, complete sequence
          Length = 217068

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    ccaatttcaacagaacaaag 170
              ||||||||||||||||||||
Sbjct: 146174 ccaatttcaacagaacaaag 146193

>gb|AC127262.3| Mus musculus BAC clone RP24-326H8 from chromosome 9, complete sequence
          Length = 181862

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 87     cagccagagattgttcaacttcac 110
              ||||||||||||||| ||||||||
Sbjct: 136662 cagccagagattgttgaacttcac 136639

>emb|BX251412.1| Tropheryma whipplei TW08/27, complete genome; segment 3/3
          Length = 302938

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      gaaatcgagaagaagctaaa 25
              ||||||||||||||||||||
Sbjct: 300573 gaaatcgagaagaagctaaa 300554

>gb|AC093601.4| Homo sapiens BAC clone RP11-338P22 from 4, complete sequence
          Length = 118129

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 262   gtgtggggtgggtttatatacaca 285
             ||||||||||||| ||||||||||
Sbjct: 18467 gtgtggggtgggtgtatatacaca 18444

>dbj|AK145934.1| Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:I530016L17
           product:nucleobindin 2, full insert sequence
          Length = 1549

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 57  cagacaggccaaggttctatcttt 80
           |||||||||||||||| |||||||
Sbjct: 239 cagacaggccaaggttttatcttt 216

>dbj|AK160442.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810010M12 product:nucleobindin
           2, full insert sequence
          Length = 727

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 57  cagacaggccaaggttctatcttt 80
           |||||||||||||||| |||||||
Sbjct: 132 cagacaggccaaggttttatcttt 109

>gb|AC134921.2| Homo sapiens BAC clone RP11-597F18 from 4, complete sequence
          Length = 96776

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aagaagctaaataaatgtag 34
             ||||||||||||||||||||
Sbjct: 27050 aagaagctaaataaatgtag 27031

>gb|AE014184.1| Tropheryma whipplei str. Twist, complete genome
          Length = 927303

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      gaaatcgagaagaagctaaa 25
              ||||||||||||||||||||
Sbjct: 924939 gaaatcgagaagaagctaaa 924920

>emb|CT030730.7| Mouse DNA sequence from clone RP24-252L17 on chromosome 9, complete
             sequence
          Length = 151456

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 87    cagccagagattgttcaacttcac 110
             ||||||||||||||| ||||||||
Sbjct: 43709 cagccagagattgttgaacttcac 43686

>emb|AJ222586.1|MMNEFA Mus musculus mRNA for NEFA protein, complete cds
          Length = 1655

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 57  cagacaggccaaggttctatcttt 80
           |||||||||||||||| |||||||
Sbjct: 284 cagacaggccaaggttttatcttt 261


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,048,478
Number of Sequences: 3902068
Number of extensions: 4048478
Number of successful extensions: 94123
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94054
Number of HSP's gapped (non-prelim): 69
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)