ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart46a02 |
|---|---|
| Clone Library Name | barley_pub |
>RBN_SHEON (Q8E985) tRNA-processing ribonuclease BN (EC 3.1.-.-) (RNase BN)| Length = 295 Score = 30.8 bits (68), Expect = 2.1 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -2 Query: 469 PVTNRIRGYARSFIAEAFAKGLGDRLQVFSTDFIDGDFVDACAGV 335 PV IRG +F+ E F GD +QV+ +F+ G+ Sbjct: 63 PVFKGIRGQIEAFVYENFLPAAGDTVQVYINEFVGNASKGTAVGI 107
>P2RY5_MOUSE (Q8BMC0) P2Y purinoceptor 5 (P2Y5) (Purinergic receptor 5)| Length = 344 Score = 30.8 bits (68), Expect = 2.1 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = +2 Query: 68 PLVQNITHADMIINTINPKFTCKECPPGRAR------THTLCFCFC 187 PL+ N+T + M++ T+N T + + H + FCFC Sbjct: 196 PLILNVTCSSMVLRTLNKPVTLSRSKMNKTKVLKMIFVHLVIFCFC 241
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 30.8 bits (68), Expect = 2.1 Identities = 26/87 (29%), Positives = 34/87 (39%) Frame = +3 Query: 144 HPDAHVHTHXXXXXXPLHATK*QPEGQRTNPSNRARPHL*LLRRQAHARHAGEVHATPST 323 HP H H H P H QP Q+ +P + + HL AH H H T Sbjct: 133 HPYPHQHQH------PAHHPHPQPHHQQNHPHHHSHSHL-----HAHPAH----HQTSPH 177 Query: 324 RALVTPAQASTKSPSMKSVEKTWRRSP 404 L T QA SP+ + ++ T P Sbjct: 178 PPLHTGNQAQV-SPATQQMQPTQTIQP 203
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 30.8 bits (68), Expect = 2.1 Identities = 26/87 (29%), Positives = 34/87 (39%) Frame = +3 Query: 144 HPDAHVHTHXXXXXXPLHATK*QPEGQRTNPSNRARPHL*LLRRQAHARHAGEVHATPST 323 HP H H H P H QP Q+ +P + + HL AH H H T Sbjct: 288 HPYPHQHQH------PAHHPHPQPHHQQNHPHHHSHSHL-----HAHPAH----HQTSPH 332 Query: 324 RALVTPAQASTKSPSMKSVEKTWRRSP 404 L T QA SP+ + ++ T P Sbjct: 333 PPLHTGNQAQV-SPATQQMQPTQTIQP 358
>WIF1_RAT (Q6IN38) Wnt inhibitory factor 1 precursor (WIF-1)| Length = 379 Score = 30.0 bits (66), Expect = 3.6 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 5/76 (6%) Frame = -2 Query: 298 PACRAWACLRSN*RCGRARLEGFVLCPSGCHFVACRGXXXXXECVCTCAS-GWAFFTGKL 122 P C C+ G GF +CP G + V C C TC + G F+ GK Sbjct: 207 PHCEKALCIPRCMNGGLCVTPGFCICPPGFYGVNC----DKANCSATCFNGGTCFYPGKC 262 Query: 121 ----GINGVDDHVSVC 86 G+ G +S C Sbjct: 263 ICPPGLEGEQCELSKC 278
>FBN1_BOVIN (P98133) Fibrillin-1 precursor (MP340)| Length = 2871 Score = 30.0 bits (66), Expect = 3.6 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +2 Query: 98 MIINTINPKFTCKECPPGRARTHTLC 175 + +NTI FTCK CPPG + HT C Sbjct: 2499 LCVNTIG-SFTCK-CPPGFTQHHTAC 2522
>WIF1_MOUSE (Q9WUA1) Wnt inhibitory factor 1 precursor (WIF-1)| Length = 379 Score = 29.6 bits (65), Expect = 4.7 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 5/76 (6%) Frame = -2 Query: 298 PACRAWACLRSN*RCGRARLEGFVLCPSGCHFVACRGXXXXXECVCTCAS-GWAFFTGKL 122 P C C+ G GF +CP G + V C C TC + G F+ GK Sbjct: 207 PHCEKALCIPRCMNGGLCVTPGFCICPPGFYGVNC----DKANCSTTCFNGGTCFYPGKC 262 Query: 121 ----GINGVDDHVSVC 86 G+ G +S C Sbjct: 263 ICPPGLEGEQCELSKC 278
>WIF1_HUMAN (Q9Y5W5) Wnt inhibitory factor 1 precursor (WIF-1)| Length = 379 Score = 29.3 bits (64), Expect = 6.2 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 5/76 (6%) Frame = -2 Query: 298 PACRAWACLRSN*RCGRARLEGFVLCPSGCHFVACRGXXXXXECVCTCAS-GWAFFTGKL 122 P C C G GF +CP G + V C C TC + G F+ GK Sbjct: 207 PHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNC----DKANCSTTCFNGGTCFYPGKC 262 Query: 121 ----GINGVDDHVSVC 86 G+ G +S C Sbjct: 263 ICPPGLEGEQCEISKC 278
>P2RY5_CHICK (P32250) P2Y purinoceptor 5 (P2Y5) (Purinergic receptor 5) (6H1)| Length = 308 Score = 29.3 bits (64), Expect = 6.2 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = +2 Query: 68 PLVQNITHADMIINTINPKFTCKECPPGRAR------THTLCFCFC 187 PL+ N+T + M++ T+N T + + H + FCFC Sbjct: 193 PLILNVTCSTMVLRTLNKPLTLSRNKLSKKKVLKMIFVHLVIFCFC 238
>FBN1_MOUSE (Q61554) Fibrillin-1 precursor| Length = 2871 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +2 Query: 98 MIINTINPKFTCKECPPGRARTHTLC 175 + +NTI FTCK CPPG + HT C Sbjct: 2499 LCVNTIGG-FTCK-CPPGFTQHHTAC 2522
>PPZ1_YEAST (P26570) Serine/threonine-protein phosphatase PP-Z1 (EC 3.1.3.16)| Length = 691 Score = 28.9 bits (63), Expect = 8.1 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 8/54 (14%) Frame = +3 Query: 231 NPSNRARPHL*LLRRQAHARHAGEVHATPSTRA--------LVTPAQASTKSPS 368 +PS ++P+L + Q H+ H H S+ + L TP+ +STK PS Sbjct: 63 DPSTPSKPNL-EVNHQRHSSHTNRYHFPSSSHSHSNSQNELLTTPSSSSTKRPS 115
>UL10_HCMVA (P16843) Hypothetical protein UL10| Length = 258 Score = 28.9 bits (63), Expect = 8.1 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Frame = +2 Query: 62 PNPLV---QNITHADMIINTINPKFTCK-ECPPGRARTHTLCFCFCSSARHEMTARRTEN 229 P+PL+ N T + + +N +PK C+ +CPP CF +R T + + Sbjct: 95 PSPLLYECHNSTLSILHVNVSDPKNYCRRKCPPNGNCEFPTCFTLSLISRTTTTRKPGQK 154 Query: 230 EPL*SRAATPLITTQTSPCTAR 295 L TP TQ T R Sbjct: 155 TTLSRLKTTPNKHTQHKRSTRR 176
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 28.9 bits (63), Expect = 8.1 Identities = 22/75 (29%), Positives = 33/75 (44%) Frame = +3 Query: 213 PEGQRTNPSNRARPHL*LLRRQAHARHAGEVHATPSTRALVTPAQASTKSPSMKSVEKTW 392 P +R PS+ A P + H+ + + T +R V+P + S K K EK Sbjct: 392 PPRRRHRPSSPATPP----PKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEK-- 445 Query: 393 RRSPRPLAKASAMKL 437 R SP P K ++L Sbjct: 446 RESPSPAPKPRKVEL 460
>FBN1_HUMAN (P35555) Fibrillin-1 precursor| Length = 2871 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +2 Query: 98 MIINTINPKFTCKECPPGRARTHTLC 175 + +NTI FTCK CPPG + HT C Sbjct: 2499 LCVNTIGG-FTCK-CPPGFTQHHTSC 2522 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,833,420 Number of Sequences: 219361 Number of extensions: 1017080 Number of successful extensions: 3347 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3343 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
