ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart46a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_479548.1| Oryza sativa (japonica cultivar-group), mRNA 204 2e-49
2dbj|AK062218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
3dbj|AK066191.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 5e-47
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
5dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
6gb|AY103726.1| Zea mays PCO100951 mRNA sequence 190 3e-45
7gb|AY389497.1| Zea mays cultivar Chalqueno ribosomal protein S6 ... 157 4e-35
8gb|AY104101.1| Zea mays PCO133302 mRNA sequence 153 6e-34
9dbj|AK072649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 1e-16
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
12gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare str... 96 1e-16
13emb|X79992.1|ASPK11 A.sativa Aspk11 mRNA 88 3e-14
14emb|AJ277534.1|AOF277534 Asparagus officinalis mRNA for S6 ribos... 72 2e-09
15gb|AC163724.4| Mus musculus BAC clone RP23-464C19 from chromosom... 44 0.42
16ref|XM_968614.1| PREDICTED: Tribolium castaneum similar to CG100... 42 1.7
17emb|BX530078.6| Zebrafish DNA sequence from clone DKEYP-88A5 in ... 42 1.7
18gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.6
19ref|XM_879672.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 6.6
20emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.6
21emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.6
22emb|CR749531.1| Homo sapiens genomic DNA; cDNA DKFZp686C24246 (f... 40 6.6
23gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57... 40 6.6
24gb|AC019086.7| Homo sapiens BAC clone RP11-360H4 from 2, complet... 40 6.6
25gb|AF525490.2| Streptomyces griseus fredericamycin biosynthetic ... 40 6.6
26gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62... 40 6.6
27gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, c... 40 6.6
28gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.6
29gb|AC004564.1|AC004564 Drosophila melanogaster DNA sequence (P1 ... 40 6.6

>ref|XM_479548.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1425

 Score =  204 bits (103), Expect = 2e-49
 Identities = 247/295 (83%)
 Strand = Plus / Minus

                                                                        
Query: 186  tggaggaacggcgcgggcctgacatatgtgaaccccgcaaagtttccttgcccaccgccg 245
            ||||||||||| || |||||||| || |||||||| || ||| | |  || ||  |||||
Sbjct: 1220 tggaggaacggagccggcctgacgtaggtgaacccggcgaagctgctgtggccggcgccg 1161

                                                                        
Query: 246  gcggtgacgggggtggcggccggggagtccagcacgggcgtgttggtccagcacacgtca 305
             ||| ||| ||||||||  |||| ||||||||||| ||| || ||||||||||| |||| 
Sbjct: 1160 ccggcgacaggggtggccaccggcgagtccagcaccggcatgctggtccagcactcgtcg 1101

                                                                        
Query: 306  aagttggcaatgcaggtcaggccggcgacgtcaggccggaagctcggctggatctcccgg 365
            |||||||| |||||||| || |||   ||||  || ||||||||||||||||||| ||||
Sbjct: 1100 aagttggcgatgcaggtgagcccgctcacgttgggtcggaagctcggctggatctgccgg 1041

                                                                        
Query: 366  gcgtccagcttcctccagttgatcggcttgaaccacttgtgcttctttatctcgtcgctg 425
            || ||||||||||||||||||||||| |||| ||| |||||| |||||||||| ||||||
Sbjct: 1040 gcctccagcttcctccagttgatcggtttgagccatttgtgcctctttatctcatcgctg 981

                                                                   
Query: 426  ccgccgggtccggttcccagccgcttgccggcttctttgtgcagcaatcctttca 480
            ||||| || ||| |||| |||||||||||  |||||||||| |||| ||||||||
Sbjct: 980  ccgcccggaccgcttcctagccgcttgccaccttctttgtggagcagtcctttca 926



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>dbj|AK062218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-B02, full
            insert sequence
          Length = 1425

 Score =  204 bits (103), Expect = 2e-49
 Identities = 247/295 (83%)
 Strand = Plus / Minus

                                                                        
Query: 186  tggaggaacggcgcgggcctgacatatgtgaaccccgcaaagtttccttgcccaccgccg 245
            ||||||||||| || |||||||| || |||||||| || ||| | |  || ||  |||||
Sbjct: 1220 tggaggaacggagccggcctgacgtaggtgaacccggcgaagctgctgtggccggcgccg 1161

                                                                        
Query: 246  gcggtgacgggggtggcggccggggagtccagcacgggcgtgttggtccagcacacgtca 305
             ||| ||| ||||||||  |||| ||||||||||| ||| || ||||||||||| |||| 
Sbjct: 1160 ccggcgacaggggtggccaccggcgagtccagcaccggcatgctggtccagcactcgtcg 1101

                                                                        
Query: 306  aagttggcaatgcaggtcaggccggcgacgtcaggccggaagctcggctggatctcccgg 365
            |||||||| |||||||| || |||   ||||  || ||||||||||||||||||| ||||
Sbjct: 1100 aagttggcgatgcaggtgagcccgctcacgttgggtcggaagctcggctggatctgccgg 1041

                                                                        
Query: 366  gcgtccagcttcctccagttgatcggcttgaaccacttgtgcttctttatctcgtcgctg 425
            || ||||||||||||||||||||||| |||| ||| |||||| |||||||||| ||||||
Sbjct: 1040 gcctccagcttcctccagttgatcggtttgagccatttgtgcctctttatctcatcgctg 981

                                                                   
Query: 426  ccgccgggtccggttcccagccgcttgccggcttctttgtgcagcaatcctttca 480
            ||||| || ||| |||| |||||||||||  |||||||||| |||| ||||||||
Sbjct: 980  ccgcccggaccgcttcctagccgcttgccaccttctttgtggagcagtcctttca 926



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>dbj|AK066191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051C07, full
            insert sequence
          Length = 2598

 Score =  196 bits (99), Expect = 5e-47
 Identities = 246/295 (83%)
 Strand = Plus / Minus

                                                                        
Query: 186  tggaggaacggcgcgggcctgacatatgtgaaccccgcaaagtttccttgcccaccgccg 245
            ||||||||||| || |||||||| || |||||||| || ||| | |  || ||  |||||
Sbjct: 2401 tggaggaacggagccggcctgacgtaggtgaacccggcgaagctgctgtggccggcgccg 2342

                                                                        
Query: 246  gcggtgacgggggtggcggccggggagtccagcacgggcgtgttggtccagcacacgtca 305
             ||| ||| ||||||||  |||| ||||||||||| ||| || ||||||||||| |||| 
Sbjct: 2341 ccggcgacaggggtggccaccggcgagtccagcaccggcatgctggtccagcactcgtcg 2282

                                                                        
Query: 306  aagttggcaatgcaggtcaggccggcgacgtcaggccggaagctcggctggatctcccgg 365
            |||||||| |||||||| || |||   ||||  || ||||||||||||||||||| ||||
Sbjct: 2281 aagttggcgatgcaggtgagcccgctcacgttgggtcggaagctcggctggatctgccgg 2222

                                                                        
Query: 366  gcgtccagcttcctccagttgatcggcttgaaccacttgtgcttctttatctcgtcgctg 425
            || ||||||||||||||||||||||| |||| ||| |||| | |||||||||| ||||||
Sbjct: 2221 gcctccagcttcctccagttgatcggtttgagccatttgtacctctttatctcatcgctg 2162

                                                                   
Query: 426  ccgccgggtccggttcccagccgcttgccggcttctttgtgcagcaatcctttca 480
            ||||| || ||| |||| |||||||||||  |||||||||| |||| ||||||||
Sbjct: 2161 ccgcccggaccgcttcctagccgcttgccaccttctttgtggagcagtcctttca 2107



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  194 bits (98), Expect = 2e-46
 Identities = 239/286 (83%)
 Strand = Plus / Minus

                                                                            
Query: 186      tggaggaacggcgcgggcctgacatatgtgaaccccgcaaagtttccttgcccaccgccg 245
                ||||||||||| || |||||||| || |||||||| || ||| | |  || ||  |||||
Sbjct: 28805725 tggaggaacggagccggcctgacgtaggtgaacccggcgaagctgctgtggccggcgccg 28805666

                                                                            
Query: 246      gcggtgacgggggtggcggccggggagtccagcacgggcgtgttggtccagcacacgtca 305
                 ||| ||| ||||||||  |||| ||||||||||| ||| || ||||||||||| |||| 
Sbjct: 28805665 ccggcgacaggggtggccaccggcgagtccagcaccggcatgctggtccagcactcgtcg 28805606

                                                                            
Query: 306      aagttggcaatgcaggtcaggccggcgacgtcaggccggaagctcggctggatctcccgg 365
                |||||||| |||||||| || |||   ||||  || ||||||||||||||||||| ||||
Sbjct: 28805605 aagttggcgatgcaggtgagcccgctcacgttgggtcggaagctcggctggatctgccgg 28805546

                                                                            
Query: 366      gcgtccagcttcctccagttgatcggcttgaaccacttgtgcttctttatctcgtcgctg 425
                || ||||||||||||||||||||||| |||| ||| |||||| |||||||||| ||||||
Sbjct: 28805545 gcctccagcttcctccagttgatcggtttgagccatttgtgcctctttatctcatcgctg 28805486

                                                              
Query: 426      ccgccgggtccggttcccagccgcttgccggcttctttgtgcagca 471
                ||||| || ||| |||| |||||||||||  |||||||||| ||||
Sbjct: 28805485 ccgcccggaccgcttcctagccgcttgccaccttctttgtggagca 28805440



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>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0008J01
          Length = 159900

 Score =  194 bits (98), Expect = 2e-46
 Identities = 239/286 (83%)
 Strand = Plus / Minus

                                                                         
Query: 186   tggaggaacggcgcgggcctgacatatgtgaaccccgcaaagtttccttgcccaccgccg 245
             ||||||||||| || |||||||| || |||||||| || ||| | |  || ||  |||||
Sbjct: 63411 tggaggaacggagccggcctgacgtaggtgaacccggcgaagctgctgtggccggcgccg 63352

                                                                         
Query: 246   gcggtgacgggggtggcggccggggagtccagcacgggcgtgttggtccagcacacgtca 305
              ||| ||| ||||||||  |||| ||||||||||| ||| || ||||||||||| |||| 
Sbjct: 63351 ccggcgacaggggtggccaccggcgagtccagcaccggcatgctggtccagcactcgtcg 63292

                                                                         
Query: 306   aagttggcaatgcaggtcaggccggcgacgtcaggccggaagctcggctggatctcccgg 365
             |||||||| |||||||| || |||   ||||  || ||||||||||||||||||| ||||
Sbjct: 63291 aagttggcgatgcaggtgagcccgctcacgttgggtcggaagctcggctggatctgccgg 63232

                                                                         
Query: 366   gcgtccagcttcctccagttgatcggcttgaaccacttgtgcttctttatctcgtcgctg 425
             || ||||||||||||||||||||||| |||| ||| |||||| |||||||||| ||||||
Sbjct: 63231 gcctccagcttcctccagttgatcggtttgagccatttgtgcctctttatctcatcgctg 63172

                                                           
Query: 426   ccgccgggtccggttcccagccgcttgccggcttctttgtgcagca 471
             ||||| || ||| |||| |||||||||||  |||||||||| ||||
Sbjct: 63171 ccgcccggaccgcttcctagccgcttgccaccttctttgtggagca 63126



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>gb|AY103726.1| Zea mays PCO100951 mRNA sequence
          Length = 2440

 Score =  190 bits (96), Expect = 3e-45
 Identities = 165/188 (87%)
 Strand = Plus / Minus

                                                                        
Query: 265  ccggggagtccagcacgggcgtgttggtccagcacacgtcaaagttggcaatgcaggtca 324
            |||| ||||||||||||||||| || ||||||||| |||| |||||||| || ||||| |
Sbjct: 1041 ccggagagtccagcacgggcgtcttcgtccagcactcgtcgaagttggcgatacaggtaa 982

                                                                        
Query: 325  ggccggcgacgtcaggccggaagctcggctggatctcccgggcgtccagcttcctccagt 384
            | ||||||||||  ||||| |||||||||||||||| |||||| ||||||||||||||||
Sbjct: 981  gcccggcgacgttcggccgaaagctcggctggatctgccgggcctccagcttcctccagt 922

                                                                        
Query: 385  tgatcggcttgaaccacttgtgcttctttatctcgtcgctgccgccgggtccggttccca 444
            |||| ||||||||||||||||| || |||||||||| |||||| ||||| | | | ||||
Sbjct: 921  tgattggcttgaaccacttgtggttttttatctcgttgctgcctccggggcagctgccca 862

                    
Query: 445  gccgcttg 452
            ||||||||
Sbjct: 861  gccgcttg 854



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 189  aggaacggcgcgggcctgacatatgtgaaccccgcaaagtt 229
            |||| ||||||||||||||| || ||||||||||| |||||
Sbjct: 1111 aggaccggcgcgggcctgacgtaggtgaaccccgcgaagtt 1071



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>gb|AY389497.1| Zea mays cultivar Chalqueno ribosomal protein S6 kinase mRNA,
            complete cds
          Length = 1861

 Score =  157 bits (79), Expect = 4e-35
 Identities = 165/194 (85%), Gaps = 6/194 (3%)
 Strand = Plus / Minus

                                                                        
Query: 265  ccggggagtccagcacgggcgtgttggtccagcacacgtca------aagttggcaatgc 318
            |||| ||||||||||||||||| || ||||||||| ||||       |||||||| || |
Sbjct: 1514 ccggagagtccagcacgggcgtcttcgtccagcactcgtcgtcgtcgaagttggcgatac 1455

                                                                        
Query: 319  aggtcaggccggcgacgtcaggccggaagctcggctggatctcccgggcgtccagcttcc 378
            |||| || ||||||||||  ||||| |||||||||||||||| |||||| ||||||||||
Sbjct: 1454 aggtaagcccggcgacgttcggccgaaagctcggctggatctgccgggcctccagcttcc 1395

                                                                        
Query: 379  tccagttgatcggcttgaaccacttgtgcttctttatctcgtcgctgccgccgggtccgg 438
            |||||||||| ||||||||||||||||| || |||||||||| |||||| ||||| | | 
Sbjct: 1394 tccagttgattggcttgaaccacttgtggttttttatctcgttgctgcctccggggcagc 1335

                          
Query: 439  ttcccagccgcttg 452
            | ||||||||||||
Sbjct: 1334 tgcccagccgcttg 1321



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 189  aggaacggcgcgggcctgacatatgtgaaccccgcaaagtt 229
            |||| ||||||||||||||| || ||||||||||| |||||
Sbjct: 1584 aggatcggcgcgggcctgacgtaggtgaaccccgcgaagtt 1544



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>gb|AY104101.1| Zea mays PCO133302 mRNA sequence
          Length = 646

 Score =  153 bits (77), Expect = 6e-34
 Identities = 173/205 (84%)
 Strand = Plus / Minus

                                                                       
Query: 276 agcacgggcgtgttggtccagcacacgtcaaagttggcaatgcaggtcaggccggcgacg 335
           ||||||||| |||| ||||||||| |||||||||| ||||||||||||  ||| || || 
Sbjct: 340 agcacgggcatgttcgtccagcactcgtcaaagttcgcaatgcaggtcttgccagcaaca 281

                                                                       
Query: 336 tcaggccggaagctcggctggatctcccgggcgtccagcttcctccagttgatcggcttg 395
           |  ||||||||||| |||| ||||| |||||| |||||| || ||||||| |  | ||||
Sbjct: 280 ttcggccggaagcttggctcgatctgccgggcctccagcctcttccagtttacagacttg 221

                                                                       
Query: 396 aaccacttgtgcttctttatctcgtcgctgccgccgggtccggttcccagccgcttgccg 455
           ||||||||||| ||||| || ||||| |||||||| |||||| ||||||||||  |||| 
Sbjct: 220 aaccacttgtggttcttgatttcgtcactgccgcctggtccgcttcccagccgtctgcca 161

                                    
Query: 456 gcttctttgtgcagcaatcctttca 480
           |||||||||||||  ||||||||||
Sbjct: 160 gcttctttgtgcaataatcctttca 136



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 186 tggaggaacggcgcgggcctgacatatgtgaaccccgcaaagtt 229
           ||||||||||| |||||||| |||||  |||||||| |||||||
Sbjct: 421 tggaggaacggtgcgggcctcacataactgaaccccacaaagtt 378



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>dbj|AK072649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131A03, full
            insert sequence
          Length = 2244

 Score =  101 bits (51), Expect = 2e-18
 Identities = 174/215 (80%)
 Strand = Plus / Minus

                                                                        
Query: 270  gagtccagcacgggcgtgttggtccagcacacgtcaaagttggcaatgcaggtcaggccg 329
            ||||| ||||||||| || ||||||||||| ||||||||||||| ||||||||   ||| 
Sbjct: 1755 gagtcgagcacgggcatgctggtccagcactcgtcaaagttggcgatgcaggttttgcca 1696

                                                                        
Query: 330  gcgacgtcaggccggaagctcggctggatctcccgggcgtccagcttcctccagttgatc 389
            || || |  || |||||||| ||||| ||||  |||| ||| |||||| ||||||| |  
Sbjct: 1695 gcaacatttgggcggaagcttggctgaatctgtcgggagtctagcttcttccagtttact 1636

                                                                        
Query: 390  ggcttgaaccacttgtgcttctttatctcgtcgctgccgccgggtccggttcccagccgc 449
            | ||||||||||||||| |||||||| || | ||| ||||| |||||    ||||||| |
Sbjct: 1635 gacttgaaccacttgtgattctttatttcattgctcccgcctggtccacagcccagcctc 1576

                                               
Query: 450  ttgccggcttctttgtgcagcaatcctttcagcag 484
             |||| |||||||||||||| || ||||| |||||
Sbjct: 1575 ctgccagcttctttgtgcagtaagccttttagcag 1541



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 162/200 (81%)
 Strand = Plus / Plus

                                                                            
Query: 270      gagtccagcacgggcgtgttggtccagcacacgtcaaagttggcaatgcaggtcaggccg 329
                ||||| ||||||||| || ||||||||||| ||||||||||||| ||||||||   ||| 
Sbjct: 12313794 gagtcgagcacgggcatgctggtccagcactcgtcaaagttggcgatgcaggttttgcca 12313853

                                                                            
Query: 330      gcgacgtcaggccggaagctcggctggatctcccgggcgtccagcttcctccagttgatc 389
                || || |  || |||||||| ||||| ||||  |||| ||| |||||| ||||||| |  
Sbjct: 12313854 gcaacatttgggcggaagcttggctgaatctgtcgggagtctagcttcttccagtttact 12313913

                                                                            
Query: 390      ggcttgaaccacttgtgcttctttatctcgtcgctgccgccgggtccggttcccagccgc 449
                | ||||||||||||||| |||||||| || | ||| ||||| |||||    ||||||| |
Sbjct: 12313914 gacttgaaccacttgtgattctttatttcattgctcccgcctggtccacagcccagcctc 12313973

                                    
Query: 450      ttgccggcttctttgtgcag 469
                 |||| ||||||||||||||
Sbjct: 12313974 ctgccagcttctttgtgcag 12313993



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 270      gagtccagcacgggcgtgttggtccagcacacgtcaaagttggcaatgcaggt 322
                ||||| ||||||||| || ||||||||||| ||||||| ||||| ||||||||
Sbjct: 12297601 gagtcgagcacgggcatgctggtccagcactcgtcaaaattggcgatgcaggt 12297653



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 162/200 (81%)
 Strand = Plus / Plus

                                                                            
Query: 270      gagtccagcacgggcgtgttggtccagcacacgtcaaagttggcaatgcaggtcaggccg 329
                ||||| ||||||||| || ||||||||||| ||||||||||||| ||||||||   ||| 
Sbjct: 12310557 gagtcgagcacgggcatgctggtccagcactcgtcaaagttggcgatgcaggttttgcca 12310616

                                                                            
Query: 330      gcgacgtcaggccggaagctcggctggatctcccgggcgtccagcttcctccagttgatc 389
                || || |  || |||||||| ||||| ||||  |||| ||| |||||| ||||||| |  
Sbjct: 12310617 gcaacatttgggcggaagcttggctgaatctgtcgggagtctagcttcttccagtttact 12310676

                                                                            
Query: 390      ggcttgaaccacttgtgcttctttatctcgtcgctgccgccgggtccggttcccagccgc 449
                | ||||||||||||||| |||||||| || | ||| ||||| |||||    ||||||| |
Sbjct: 12310677 gacttgaaccacttgtgattctttatttcattgctcccgcctggtccacagcccagcctc 12310736

                                    
Query: 450      ttgccggcttctttgtgcag 469
                 |||| ||||||||||||||
Sbjct: 12310737 ctgccagcttctttgtgcag 12310756



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 270      gagtccagcacgggcgtgttggtccagcacacgtcaaagttggcaatgcaggt 322
                ||||| ||||||||| || ||||||||||| ||||||| ||||| ||||||||
Sbjct: 12294364 gagtcgagcacgggcatgctggtccagcactcgtcaaaattggcgatgcaggt 12294416



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>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0029K10, from chromosome 3, complete sequence
          Length = 135940

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 162/200 (81%)
 Strand = Plus / Plus

                                                                         
Query: 270   gagtccagcacgggcgtgttggtccagcacacgtcaaagttggcaatgcaggtcaggccg 329
             ||||| ||||||||| || ||||||||||| ||||||||||||| ||||||||   ||| 
Sbjct: 83327 gagtcgagcacgggcatgctggtccagcactcgtcaaagttggcgatgcaggttttgcca 83386

                                                                         
Query: 330   gcgacgtcaggccggaagctcggctggatctcccgggcgtccagcttcctccagttgatc 389
             || || |  || |||||||| ||||| ||||  |||| ||| |||||| ||||||| |  
Sbjct: 83387 gcaacatttgggcggaagcttggctgaatctgtcgggagtctagcttcttccagtttact 83446

                                                                         
Query: 390   ggcttgaaccacttgtgcttctttatctcgtcgctgccgccgggtccggttcccagccgc 449
             | ||||||||||||||| |||||||| || | ||| ||||| |||||    ||||||| |
Sbjct: 83447 gacttgaaccacttgtgattctttatttcattgctcccgcctggtccacagcccagcctc 83506

                                 
Query: 450   ttgccggcttctttgtgcag 469
              |||| ||||||||||||||
Sbjct: 83507 ctgccagcttctttgtgcag 83526



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 270   gagtccagcacgggcgtgttggtccagcacacgtcaaagttggcaatgcaggt 322
             ||||| ||||||||| || ||||||||||| ||||||| ||||| ||||||||
Sbjct: 67134 gagtcgagcacgggcatgctggtccagcactcgtcaaaattggcgatgcaggt 67186



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>emb|X79992.1|ASPK11 A.sativa Aspk11 mRNA
          Length = 1987

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 161/200 (80%)
 Strand = Plus / Minus

                                                                        
Query: 270  gagtccagcacgggcgtgttggtccagcacacgtcaaagttggcaatgcaggtcaggccg 329
            ||||||||||| ||| |  | ||||||||| |||||||||| |||||||||||| | |||
Sbjct: 1683 gagtccagcaccggcatactcgtccagcactcgtcaaagtttgcaatgcaggtctgcccg 1624

                                                                        
Query: 330  gcgacgtcaggccggaagctcggctggatctcccgggcgtccagcttcctccagttgatc 389
            || || |  || | |||||| ||||||||||  || || || ||  || ||||||| |  
Sbjct: 1623 gcaacattcgggcagaagcttggctggatctgtcgagcctcgagtctcttccagtttact 1564

                                                                        
Query: 390  ggcttgaaccacttgtgcttctttatctcgtcgctgccgccgggtccggttcccagccgc 449
            |  |||||||||||||| |||||||| || |||||||||||  | ||| ||||||| |||
Sbjct: 1563 gctttgaaccacttgtggttctttatttcatcgctgccgcccagaccgcttcccagtcgc 1504

                                
Query: 450  ttgccggcttctttgtgcag 469
            || || ||||||||||||||
Sbjct: 1503 ttaccagcttctttgtgcag 1484



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>emb|AJ277534.1|AOF277534 Asparagus officinalis mRNA for S6 ribosomal protein kinase (pk1 gene)
          Length = 1747

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 372  agcttcctccagttgatcggcttgaaccacttgtgcttctttatctcgtcgctgcc 427
            |||||||||||||| |||  ||||||||||||||| ||||||||||||| ||||||
Sbjct: 1277 agcttcctccagtttatcaacttgaaccacttgtgattctttatctcgttgctgcc 1222



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>gb|AC163724.4| Mus musculus BAC clone RP23-464C19 from chromosome 6, complete sequence
          Length = 177662

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 32    tcaaaaggaagatgcagaggaa 53
             ||||||||||||||||||||||
Sbjct: 87726 tcaaaaggaagatgcagaggaa 87705



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>ref|XM_968614.1| PREDICTED: Tribolium castaneum similar to CG10033-PA, isoform A
            (LOC662523), mRNA
          Length = 2535

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 395  gaaccacttgtgcttctttatctcg 419
            ||||||||||||||||| |||||||
Sbjct: 2376 gaaccacttgtgcttctgtatctcg 2352



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>emb|BX530078.6| Zebrafish DNA sequence from clone DKEYP-88A5 in linkage group 5, complete
              sequence
          Length = 191073

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 74     catagaacacagtcgttcagtgaat 98
              ||||||||||||| |||||||||||
Sbjct: 175684 catagaacacagtagttcagtgaat 175708



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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    ttgcccaccgccggcggtga 252
              ||||||||||||||||||||
Sbjct: 443304 ttgcccaccgccggcggtga 443285



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>ref|XM_879672.1| PREDICTED: Bos taurus hypothetical protein LOC615338 (LOC615338),
           mRNA
          Length = 1938

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 accgccggcggtgacggggg 258
           ||||||||||||||||||||
Sbjct: 446 accgccggcggtgacggggg 427



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>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13
          Length = 342416

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    ttgcccaccgccggcggtga 252
              ||||||||||||||||||||
Sbjct: 101309 ttgcccaccgccggcggtga 101290



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>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14
          Length = 324050

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    ttgcccaccgccggcggtga 252
              ||||||||||||||||||||
Sbjct: 101233 ttgcccaccgccggcggtga 101214



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>emb|CR749531.1| Homo sapiens genomic DNA; cDNA DKFZp686C24246 (from clone
            DKFZp686C24246)
          Length = 4462

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  ccggttcccagccgcttgcc 454
            ||||||||||||||||||||
Sbjct: 4148 ccggttcccagccgcttgcc 4167



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>gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57C-57D, BAC clone
             BACR13H23, complete sequence
          Length = 179139

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   acccgtttcgggtgcactga 140
             ||||||||||||||||||||
Sbjct: 65902 acccgtttcgggtgcactga 65921



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>gb|AC019086.7| Homo sapiens BAC clone RP11-360H4 from 2, complete sequence
          Length = 199934

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aaaaggaagatgcagaggaa 53
             ||||||||||||||||||||
Sbjct: 17159 aaaaggaagatgcagaggaa 17140



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>gb|AF525490.2| Streptomyces griseus fredericamycin biosynthetic gene cluster, complete
             sequence
          Length = 33064

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 242   gccggcggtgacgggggtggcggccggg 269
             |||||||||||| |||| ||||||||||
Sbjct: 14960 gccggcggtgaccggggaggcggccggg 14987



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>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete
             sequence
          Length = 313634

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   acccgtttcgggtgcactga 140
             ||||||||||||||||||||
Sbjct: 55737 acccgtttcgggtgcactga 55756



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>gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, complete sequence
          Length = 174415

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    ctcaaaaggaagatgcagag 50
             ||||||||||||||||||||
Sbjct: 91890 ctcaaaaggaagatgcagag 91909



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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     tggcggccggggagtccagc 278
               ||||||||||||||||||||
Sbjct: 2050317 tggcggccggggagtccagc 2050336



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>gb|AC004564.1|AC004564 Drosophila melanogaster DNA sequence (P1 DS08012 (D224)), complete
             sequence
          Length = 67833

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   acccgtttcgggtgcactga 140
             ||||||||||||||||||||
Sbjct: 61612 acccgtttcgggtgcactga 61593


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,432,130
Number of Sequences: 3902068
Number of extensions: 3432130
Number of successful extensions: 65465
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65132
Number of HSP's gapped (non-prelim): 323
length of query: 489
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 467
effective length of database: 17,147,199,772
effective search space: 8007742293524
effective search space used: 8007742293524
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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