>ref|XM_450842.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1543

 Score =  254 bits (128), Expect = 2e-64
 Identities = 236/272 (86%)
 Strand = Plus / Minus

                                                                        
Query: 212  ggcttcccgttcaactttgggaaggggtcttgtttgctgagcacaagaactttgcttttg 271
            |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| || 
Sbjct: 1422 ggcttcccattcaactttgggaaaggatcttgtttgctgaggacaagaactttgctctta 1363

                                                                        
Query: 272  tgggcaaagtatccttttatgagattcttgtatattaggcacgccatgatgcattccacc 331
            || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1362 tgagcaaagtatcctttaatgagattcttgtatattaggcacgccatgatgcactccacc 1303

                                                                        
Query: 332  tcatccacgtccatggtgattccaagccattgcagagtctttaccaagacctccagcttg 391
            |||||||||||||||   ||| ||||||||| || ||  ||||| | ||| || ||||| 
Sbjct: 1302 tcatccacgtccatgtcaatttcaagccatttcaaagcttttacaacgacttctagctta 1243

                                                                        
Query: 392  atttgatgcgctttagatggttccttctccctctgtatgatatggattttcttcactaat 451
            |||||||| || || | ||| ||||||| |||||| ||||||||||||||||| ||||||
Sbjct: 1242 atttgatgtgccttggctggctccttctgcctctgaatgatatggattttcttaactaat 1183

                                            
Query: 452  cttcggtagacctggagttcaagtttctccaa 483
            ||  | ||||| || |||||||| ||||||||
Sbjct: 1182 ctctgatagacttgaagttcaagcttctccaa 1151

>dbj|AK063271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B11, full
            insert sequence
          Length = 1543

 Score =  254 bits (128), Expect = 2e-64
 Identities = 236/272 (86%)
 Strand = Plus / Minus

                                                                        
Query: 212  ggcttcccgttcaactttgggaaggggtcttgtttgctgagcacaagaactttgcttttg 271
            |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| || 
Sbjct: 1422 ggcttcccattcaactttgggaaaggatcttgtttgctgaggacaagaactttgctctta 1363

                                                                        
Query: 272  tgggcaaagtatccttttatgagattcttgtatattaggcacgccatgatgcattccacc 331
            || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1362 tgagcaaagtatcctttaatgagattcttgtatattaggcacgccatgatgcactccacc 1303

                                                                        
Query: 332  tcatccacgtccatggtgattccaagccattgcagagtctttaccaagacctccagcttg 391
            |||||||||||||||   ||| ||||||||| || ||  ||||| | ||| || ||||| 
Sbjct: 1302 tcatccacgtccatgtcaatttcaagccatttcaaagcttttacaacgacttctagctta 1243

                                                                        
Query: 392  atttgatgcgctttagatggttccttctccctctgtatgatatggattttcttcactaat 451
            |||||||| || || | ||| ||||||| |||||| ||||||||||||||||| ||||||
Sbjct: 1242 atttgatgtgccttggctggctccttctgcctctgaatgatatggattttcttaactaat 1183

                                            
Query: 452  cttcggtagacctggagttcaagtttctccaa 483
            ||  | ||||| || |||||||| ||||||||
Sbjct: 1182 ctctgatagacttgaagttcaagcttctccaa 1151

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  168 bits (85), Expect = 1e-38
 Identities = 112/121 (92%)
 Strand = Plus / Plus

                                                                            
Query: 212      ggcttcccgttcaactttgggaaggggtcttgtttgctgagcacaagaactttgcttttg 271
                |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| || 
Sbjct: 13120823 ggcttcccattcaactttgggaaaggatcttgtttgctgaggacaagaactttgctctta 13120882

                                                                            
Query: 272      tgggcaaagtatccttttatgagattcttgtatattaggcacgccatgatgcattccacc 331
                || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 13120883 tgagcaaagtatcctttaatgagattcttgtatattaggcacgccatgatgcactccacc 13120942

                 
Query: 332      t 332
                |
Sbjct: 13120943 t 13120943



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 88/108 (81%)
 Strand = Plus / Plus

                                                                            
Query: 329      acctcatccacgtccatggtgattccaagccattgcagagtctttaccaagacctccagc 388
                ||||||||||||||||||   ||| ||||||||| || ||  ||||| | ||| || |||
Sbjct: 13121030 acctcatccacgtccatgtcaatttcaagccatttcaaagcttttacaacgacttctagc 13121089

                                                                
Query: 389      ttgatttgatgcgctttagatggttccttctccctctgtatgatatgg 436
                || |||||||| || || | ||| ||||||| |||||| |||||||||
Sbjct: 13121090 ttaatttgatgtgccttggctggctccttctgcctctgaatgatatgg 13121137

>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0048A13
          Length = 137680

 Score =  168 bits (85), Expect = 1e-38
 Identities = 112/121 (92%)
 Strand = Plus / Plus

                                                                         
Query: 212   ggcttcccgttcaactttgggaaggggtcttgtttgctgagcacaagaactttgcttttg 271
             |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| || 
Sbjct: 42913 ggcttcccattcaactttgggaaaggatcttgtttgctgaggacaagaactttgctctta 42972

                                                                         
Query: 272   tgggcaaagtatccttttatgagattcttgtatattaggcacgccatgatgcattccacc 331
             || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 42973 tgagcaaagtatcctttaatgagattcttgtatattaggcacgccatgatgcactccacc 43032

              
Query: 332   t 332
             |
Sbjct: 43033 t 43033



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 88/108 (81%)
 Strand = Plus / Plus

                                                                         
Query: 329   acctcatccacgtccatggtgattccaagccattgcagagtctttaccaagacctccagc 388
             ||||||||||||||||||   ||| ||||||||| || ||  ||||| | ||| || |||
Sbjct: 43120 acctcatccacgtccatgtcaatttcaagccatttcaaagcttttacaacgacttctagc 43179

                                                             
Query: 389   ttgatttgatgcgctttagatggttccttctccctctgtatgatatgg 436
             || |||||||| || || | ||| ||||||| |||||| |||||||||
Sbjct: 43180 ttaatttgatgtgccttggctggctccttctgcctctgaatgatatgg 43227

>emb|AL353804.22| Human DNA sequence from clone RP13-216E22 on chromosome Xq13.1-21.1
             Note the TSIX gene (see AmJHumGenet 69, 951) is known to
             overlap the XIST locus however this transcript has not
             been submitted to the databases and therefore it is not
             possible at this stage to annotate the locus, complete
             sequence
          Length = 167668

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 72    aacattgcagctaaaatacaaa 93
             ||||||||||||||||||||||
Sbjct: 13513 aacattgcagctaaaatacaaa 13534

>emb|CR376844.12| Zebrafish DNA sequence from clone DKEYP-51B7 in linkage group 8,
             complete sequence
          Length = 203472

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 257   agaactttgcttttgtgggca 277
             |||||||||||||||||||||
Sbjct: 80153 agaactttgcttttgtgggca 80133

>emb|AL445426.20| Human DNA sequence from clone RP11-62J10 on chromosome 1 Contains the
             3' end of a novel gene and a CpG island, complete sequence
          Length = 159117

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 367   agtctttaccaagacctccag 387
             |||||||||||||||||||||
Sbjct: 99709 agtctttaccaagacctccag 99729

>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 412     ttccttctccctctgtatgat 432
               |||||||||||||||||||||
Sbjct: 1958312 ttccttctccctctgtatgat 1958332

>ref|NM_015296.1| Homo sapiens dedicator of cytokinesis 9 (DOCK9), mRNA
          Length = 7522

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  taccaagacctccagcttga 392
            ||||||||||||||||||||
Sbjct: 3338 taccaagacctccagcttga 3357

>gb|AC183539.2| Pan troglodytes BAC clone CH251-340H7 from chromosome 15, complete
              sequence
          Length = 155024

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    tttatgagattcttgtatat 306
              ||||||||||||||||||||
Sbjct: 135849 tttatgagattcttgtatat 135868

>gb|AC145900.3| Pan troglodytes BAC clone RP43-40I9 from 7, complete sequence
          Length = 160229

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   atgtgttcagtacatcaaag 153
             ||||||||||||||||||||
Sbjct: 97536 atgtgttcagtacatcaaag 97517

>gb|AE014816.1| Plasmodium falciparum 3D7 chromosome 14 section 1 of 13 of the complete
             sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   tttatgagattcttgtatat 306
             ||||||||||||||||||||
Sbjct: 72159 tttatgagattcttgtatat 72140

>gb|AF527605.1| Homo sapiens zizimin1 mRNA, complete cds
          Length = 7522

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  taccaagacctccagcttga 392
            ||||||||||||||||||||
Sbjct: 3338 taccaagacctccagcttga 3357

>emb|CR936820.1| Homo sapiens mRNA; cDNA DKFZp686C11110 (from clone DKFZp686C11110)
          Length = 11849

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  taccaagacctccagcttga 392
            ||||||||||||||||||||
Sbjct: 3418 taccaagacctccagcttga 3437

>emb|CR857489.1| Pongo pygmaeus mRNA; cDNA DKFZp469N024 (from clone DKFZp469N024)
          Length = 7463

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  taccaagacctccagcttga 392
            ||||||||||||||||||||
Sbjct: 3310 taccaagacctccagcttga 3329

>dbj|AB028981.2| Homo sapiens mRNA for KIAA1058 protein, partial cds
          Length = 7545

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  taccaagacctccagcttga 392
            ||||||||||||||||||||
Sbjct: 3361 taccaagacctccagcttga 3380

>dbj|AK126492.1| Homo sapiens cDNA FLJ44528 fis, clone UTERU3003523
          Length = 4073

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  taccaagacctccagcttga 392
            ||||||||||||||||||||
Sbjct: 3455 taccaagacctccagcttga 3474

>dbj|AK127329.1| Homo sapiens cDNA FLJ45400 fis, clone BRHIP3028570
          Length = 5592

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  taccaagacctccagcttga 392
            ||||||||||||||||||||
Sbjct: 3427 taccaagacctccagcttga 3446

>dbj|AK127508.1| Homo sapiens cDNA FLJ45601 fis, clone BRTHA3020771
          Length = 3676

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  taccaagacctccagcttga 392
            ||||||||||||||||||||
Sbjct: 3037 taccaagacctccagcttga 3056

>dbj|AK122987.1| Homo sapiens cDNA FLJ16744 fis, clone CTONG2006709
          Length = 2581

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  taccaagacctccagcttga 392
            ||||||||||||||||||||
Sbjct: 1942 taccaagacctccagcttga 1961

>gb|AC107220.4| Homo sapiens BAC clone RP11-586L23 from 4, complete sequence
          Length = 67392

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   agataatagaaactttcatc 171
             ||||||||||||||||||||
Sbjct: 27549 agataatagaaactttcatc 27568

>gb|AC159302.3| Mus musculus BAC clone RP23-238C13 from chromosome 8, complete sequence
          Length = 183988

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   aactttgggaaggggtcttg 243
             ||||||||||||||||||||
Sbjct: 72534 aactttgggaaggggtcttg 72553

>gb|AC155162.5| Mus musculus BAC clone RP24-421I19 from chromosome 16, complete sequence
          Length = 200912

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tacaaacattgcagctaaaa 87
              ||||||||||||||||||||
Sbjct: 114279 tacaaacattgcagctaaaa 114260

>dbj|AK032264.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430513I04
            product:unclassifiable, full insert sequence
          Length = 3126

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  caaagtatccttttatgaga 295
            ||||||||||||||||||||
Sbjct: 2835 caaagtatccttttatgaga 2816

>gb|AC005046.3|AC005046 Homo sapiens BAC clone CTB-13F3 from 7q22, complete sequence
          Length = 219436

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    atgtgttcagtacatcaaag 153
              ||||||||||||||||||||
Sbjct: 201307 atgtgttcagtacatcaaag 201288

>gb|AC138649.2| Homo sapiens chromosome 15, clone RP11-1180F24, complete sequence
          Length = 151800

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   tttatgagattcttgtatat 306
             ||||||||||||||||||||
Sbjct: 80214 tttatgagattcttgtatat 80195

>gb|AC092578.2| Homo sapiens BAC clone RP11-15F20 from 2, complete sequence
          Length = 147706

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    tctttaccaagacctccagc 388
              ||||||||||||||||||||
Sbjct: 104962 tctttaccaagacctccagc 104943

>gb|AC055876.16| Homo sapiens chromosome 15, clone RP11-578F21, complete sequence
          Length = 192533

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    tttatgagattcttgtatat 306
              ||||||||||||||||||||
Sbjct: 111903 tttatgagattcttgtatat 111884

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 144     tacatcaaagataatagaaa 163
               ||||||||||||||||||||
Sbjct: 1505065 tacatcaaagataatagaaa 1505084

>gb|AC101764.11| Mus musculus chromosome 3, clone RP24-471B15, complete sequence
          Length = 151388

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   ggttccttctccctctgtat 429
             ||||||||||||||||||||
Sbjct: 69185 ggttccttctccctctgtat 69166

>gb|AC024801.2| Caenorhabditis elegans cosmid Y50D7A, complete sequence
          Length = 122450

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 71 aaacattgcagctaaaatacaaat 94
          ||||||||||||||||||| ||||
Sbjct: 79 aaacattgcagctaaaatagaaat 56

>gb|AC006698.1| Caenorhabditis elegans cosmid W10C4, complete sequence
          Length = 25647

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 71    aaacattgcagctaaaatacaaat 94
             ||||||||||||||||||| ||||
Sbjct: 25526 aaacattgcagctaaaatagaaat 25503

>gb|AC164414.5| Mus musculus chromosome 1, clone RP24-75E15, complete sequence
          Length = 213369

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    caaagtatccttttatgaga 295
              ||||||||||||||||||||
Sbjct: 112566 caaagtatccttttatgaga 112585


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,069,863
Number of Sequences: 3902068
Number of extensions: 5069863
Number of successful extensions: 90467
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90349
Number of HSP's gapped (non-prelim): 118
length of query: 485
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 463
effective length of database: 17,147,199,772
effective search space: 7939153494436
effective search space used: 7939153494436
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)