ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart45g01 |
|---|---|
| Clone Library Name | barley_pub |
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 51.6 bits (122), Expect = 1e-06 Identities = 27/63 (42%), Positives = 35/63 (55%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 E A+ +K LV + DDP++RKPDI KAK +L WEP V L +GL FR Sbjct: 333 EFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 392 Query: 322 ERL 314 + L Sbjct: 393 KEL 395
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 51.6 bits (122), Expect = 1e-06 Identities = 27/63 (42%), Positives = 35/63 (55%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 E A+ +K LV + DDP++RKPDI KAK +L WEP V L +GL FR Sbjct: 333 EFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 392 Query: 322 ERL 314 + L Sbjct: 393 KEL 395
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 51.6 bits (122), Expect = 1e-06 Identities = 27/63 (42%), Positives = 35/63 (55%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 E A+ +K LV + DDP++RKPDI KAK +L WEP V L +GL FR Sbjct: 333 EFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 392 Query: 322 ERL 314 + L Sbjct: 393 KEL 395
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 51.6 bits (122), Expect = 1e-06 Identities = 27/63 (42%), Positives = 35/63 (55%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 E A+ +K LV + DDP++RKPDI KAK +L WEP V L +GL FR Sbjct: 333 EFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 392 Query: 322 ERL 314 + L Sbjct: 393 KEL 395
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/63 (41%), Positives = 36/63 (57%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 + A +K+LV ++ DDP++RKPDI KAK +L WEP V L +GL FR Sbjct: 334 QFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFR 393 Query: 322 ERL 314 + L Sbjct: 394 KEL 396
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 48.5 bits (114), Expect = 1e-05 Identities = 23/52 (44%), Positives = 31/52 (59%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGL 347 E A+ +K LV + DDP++R+PDI KAK +L WEP V L +GL Sbjct: 331 EFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGL 382
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) Length = 328 Score = 38.5 bits (88), Expect = 0.010 Identities = 24/68 (35%), Positives = 38/68 (55%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 ELAE VKE+V + + + PD ++ D +K +E + W+PKV L++GLV + Sbjct: 262 ELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQE-MGWKPKVPLKEGLVETYKWYV 320 Query: 322 ERLAVPKK 299 E + KK Sbjct: 321 ENVISAKK 328
>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 35.8 bits (81), Expect = 0.066 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -1 Query: 430 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 296 D RKP I A+ LDWEP + +RD + D F + + ++A Sbjct: 615 DVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659
>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 35.8 bits (81), Expect = 0.066 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -1 Query: 430 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 296 D RKP I A+ LDWEP + +RD + D F + + ++A Sbjct: 615 DVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) (AtGER1) (AtFX) Length = 312 Score = 35.0 bits (79), Expect = 0.11 Identities = 23/52 (44%), Positives = 28/52 (53%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGL 347 ELAE VKE+V E + PD ++ D +K L W PKV LRDGL Sbjct: 248 ELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLAS-LGWTPKVSLRDGL 298
>GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 330 Score = 34.7 bits (78), Expect = 0.15 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 368 E+ E+ K++ ++ TM DP D TKA+ VL W+PK Sbjct: 261 EILESAKKVTGIDIPYTMGPRRGGDPDSLVADSTKARTVLGWKPK 305
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) Length = 347 Score = 34.7 bits (78), Expect = 0.15 Identities = 20/52 (38%), Positives = 29/52 (55%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGL 347 ELAE V+ +V E V P+ +R D + ++ L WEP+V LRDG+ Sbjct: 278 ELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMRK-LGWEPRVALRDGI 328
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) (AtGER2) Length = 328 Score = 34.3 bits (77), Expect = 0.19 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 ELAE VKE+V + + PD ++ D +K L W PK+ L+DGL + + Sbjct: 262 ELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLAS-LGWTPKISLKDGLSQTYEWYL 320 Query: 322 ERLAVPKK 299 E + K+ Sbjct: 321 ENVVQKKQ 328
>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 33.5 bits (75), Expect = 0.33 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -1 Query: 430 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 296 D RKP I A+ L WEP + +RD + D F + V ++A Sbjct: 615 DVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAERA 659
>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 662 Score = 33.5 bits (75), Expect = 0.33 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -1 Query: 430 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA 290 D RKP I A+ +LDW+P + LR+ + D F ++A+A Sbjct: 616 DVAHRKPSIDNARRLLDWQPTIELRETIGKTLDFFLHEALREREAQA 662
>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 33.1 bits (74), Expect = 0.43 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -1 Query: 430 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 296 D RKP I A+ L WEP + +RD + D F + + ++A Sbjct: 615 DVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDIAERA 659
>EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose| 4-epimerase) (Galactowaldenase) Length = 348 Score = 33.1 bits (74), Expect = 0.43 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLV 344 E+ ++E+ +V T + P DP Q + +E L W PK DG+V Sbjct: 269 EVVRTLEEVSGEQVPATFADRRPGDPPQLVAGADRIREQLGWVPKHDRLDGIV 321
>RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-tyvelose| 2-epimerase) Length = 338 Score = 32.7 bits (73), Expect = 0.56 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMED 332 EL + +++ N ++ T D R DI K +DW PKV +DG+ M D Sbjct: 277 ELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYD 333
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 2) Length = 371 Score = 32.7 bits (73), Expect = 0.56 Identities = 25/73 (34%), Positives = 36/73 (49%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 E+AE V N ++ + P+ R R D T KE L W P + L+DGL + + Sbjct: 273 EMAEIVLSFENKQLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIK 331 Query: 322 ERLAVPKKAKA*G 284 E+L +K KA G Sbjct: 332 EQL---EKEKAEG 341
>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 32.3 bits (72), Expect = 0.73 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -1 Query: 430 DPRQRKPDITKAKEVLDWEPKVVLRD 353 D RKP I A+ LDWEPK+ +++ Sbjct: 615 DVEHRKPSIRNARRCLDWEPKIDMQE 640
>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 31.2 bits (69), Expect = 1.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -1 Query: 430 DPRQRKPDITKAKEVLDWEPKVVLRD 353 D RKP I A LDWEPK+ +++ Sbjct: 615 DVEHRKPSIRNAHRCLDWEPKIDMQE 640
>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 31.2 bits (69), Expect = 1.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -1 Query: 430 DPRQRKPDITKAKEVLDWEPKVVLRD 353 D RKP I A LDWEPK+ +++ Sbjct: 615 DVEHRKPSIRNAHRCLDWEPKIDMQE 640
>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 31.2 bits (69), Expect = 1.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -1 Query: 430 DPRQRKPDITKAKEVLDWEPKVVLRD 353 D RKP I A LDWEPK+ +++ Sbjct: 615 DVEHRKPSIRNAHHCLDWEPKIDMQE 640
>Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL| Length = 356 Score = 31.2 bits (69), Expect = 1.6 Identities = 12/21 (57%), Positives = 18/21 (85%) Frame = -1 Query: 409 DITKAKEVLDWEPKVVLRDGL 347 DITKA++VL + PK+ LR+G+ Sbjct: 322 DITKARKVLGYAPKIALREGM 342
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.8 bits (68), Expect = 2.1 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = -2 Query: 381 TGSPRSSYVTAWCSWRTTSGSVWQCPRRPRPKATSLR-LAYITNLPEHTHSWVGSSIFV 208 T SP +S+ T CS T SG +WQC P P S++ A+I+ E + G +V Sbjct: 394 TYSPGTSFNTT-CSSCTCSGGLWQCQDLPCPGTCSVQGGAHISTYDEKLYDLHGDCSYV 451
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 1) (OsGME-1) Length = 378 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGL 347 E+AE + + E+ + P+ R R D T KE L W P + L+DGL Sbjct: 280 EMAEIILSFEDRELPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMKLKDGL 330
>GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose| dehydratase 1) (GMD 1) Length = 361 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = -1 Query: 436 PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAK 293 P + K D +KAKE+L W+PKV + +M D E L + K+ K Sbjct: 303 PTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVD---EDLELAKREK 347
>HSP82_ASHGO (Q8J2M3) Heat shock protein HSP82| Length = 704 Score = 30.0 bits (66), Expect = 3.6 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = -1 Query: 502 ELAENVKELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 ++ ENVKEL T + P + Q + + DWE + ++ V + +FR Sbjct: 254 KVKENVKELEELNKTKPLWTRNPSEVTQEEYNAFYKSISNDWEDPLAVKHFSVEGQLEFR 313 Query: 322 ERLAVPKKA 296 L +PK+A Sbjct: 314 AILFIPKRA 322
>CINA_BACHK (Q6HF34) CinA-like protein| Length = 412 Score = 30.0 bits (66), Expect = 3.6 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = -1 Query: 499 LAENVKELVNPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 LAENVKEL+ ++ ++ T PD ++P + EP VV L R Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394 Query: 322 ERLA 311 ER A Sbjct: 395 ERSA 398
>CINA_BACCZ (Q636P5) CinA-like protein| Length = 412 Score = 30.0 bits (66), Expect = 3.6 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = -1 Query: 499 LAENVKELVNPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 LAENVKEL+ ++ ++ T PD ++P + EP VV L R Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394 Query: 322 ERLA 311 ER A Sbjct: 395 ERSA 398
>CINA_BACC1 (Q732U5) CinA-like protein| Length = 412 Score = 30.0 bits (66), Expect = 3.6 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = -1 Query: 499 LAENVKELVNPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 LAENVKEL+ ++ ++ T PD ++P + EP VV L R Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394 Query: 322 ERLA 311 ER A Sbjct: 395 ERSA 398
>CINA_BACAN (Q81WQ3) CinA-like protein| Length = 412 Score = 30.0 bits (66), Expect = 3.6 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = -1 Query: 499 LAENVKELVNPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 LAENVKEL+ ++ ++ T PD ++P + EP VV L R Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394 Query: 322 ERLA 311 ER A Sbjct: 395 ERSA 398
>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 668 Score = 30.0 bits (66), Expect = 3.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -1 Query: 430 DPRQRKPDITKAKEVLDWEPKVVLRD 353 D RKP I AK +L+WEP V + + Sbjct: 617 DVEHRKPSIDNAKRLLNWEPTVEMSE 642
>RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination protein O)| Length = 234 Score = 30.0 bits (66), Expect = 3.6 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%) Frame = -2 Query: 408 TSQRQRRFLTGSPRSSYVTAWCSWRTTSGS----------VWQCPRRPRPKATSLRLAYI 259 T + R+ L G ++ + T S+R + WQ +P P+ SL L ++ Sbjct: 62 TPPKMRKVLQGELKNPFTTIKNSYRLLQSTGKMIQAILKTQWQ--EKPSPQLFSLFLNFL 119 Query: 258 TNLPEHTHSWVGSSIFV 208 +PE H + SS+F+ Sbjct: 120 QRIPETPHPYFFSSMFL 136
>TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3)| Length = 755 Score = 29.6 bits (65), Expect = 4.7 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%) Frame = -1 Query: 406 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 263 I KA LD+EP+ GLVL+ EDD + LAVP K + FPAF Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645 Query: 262 H 260 H Sbjct: 646 H 646
>TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3)| Length = 755 Score = 29.6 bits (65), Expect = 4.7 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%) Frame = -1 Query: 406 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 263 I KA LD+EP+ GLVL+ EDD + LAVP K + FPAF Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645 Query: 262 H 260 H Sbjct: 646 H 646
>GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) (GMD) Length = 372 Score = 29.3 bits (64), Expect = 6.2 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -1 Query: 484 KELVNPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKV 365 KE VTV + P + + D TKAK+ L+W+P+V Sbjct: 310 KETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRV 349
>CINA_BACCR (Q81A15) CinA-like protein| Length = 412 Score = 29.3 bits (64), Expect = 6.2 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = -1 Query: 499 LAENVKELVNPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 323 LAENVK+++ ++ ++ T PD Q++P + EP VV L R Sbjct: 335 LAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPTVVFPLNLSGSRQQIR 394 Query: 322 ERLA 311 ER A Sbjct: 395 ERTA 398
>SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit| Length = 940 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = -1 Query: 400 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 299 KAKE+ + + ++RDG VL+ D+F R+ + ++ Sbjct: 296 KAKELFNRDKDYIVRDGEVLIVDEFTGRVLIGRR 329
>ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 654 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -1 Query: 430 DPRQRKPDITKAKEVLDWEPKVVLR 356 D +RKP+I AK++L+W PK +R Sbjct: 614 DIDRRKPNIDIAKKLLNWTPKTKIR 638 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,783,003 Number of Sequences: 219361 Number of extensions: 1553367 Number of successful extensions: 3858 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3758 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3854 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
