ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart45f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PDE7B_MOUSE (Q9QXQ1) cAMP-specific 3',5'-cyclic phosphodiesteras... 28 6.9
2PDE7B_HUMAN (Q9NP56) cAMP-specific 3',5'-cyclic phosphodiesteras... 28 6.9
3PPIL2_HUMAN (Q13356) Peptidyl-prolyl cis-trans isomerase-like 2 ... 28 9.0

>PDE7B_MOUSE (Q9QXQ1) cAMP-specific 3',5'-cyclic phosphodiesterase 7B (EC|
           3.1.4.17)
          Length = 446

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 14  GQNNPFDIKSQKHLVNIQQL*RVTITQNWIAILG 115
           G N PF IK+  HL N+ Q   V    +W + +G
Sbjct: 219 GVNQPFLIKTNHHLANLYQNMSVLENHHWRSTIG 252



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>PDE7B_HUMAN (Q9NP56) cAMP-specific 3',5'-cyclic phosphodiesterase 7B (EC|
           3.1.4.17)
          Length = 450

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 14  GQNNPFDIKSQKHLVNIQQL*RVTITQNWIAILG 115
           G N PF IK+  HL N+ Q   V    +W + +G
Sbjct: 219 GVNQPFLIKTNHHLANLYQNMSVLENHHWRSTIG 252



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>PPIL2_HUMAN (Q13356) Peptidyl-prolyl cis-trans isomerase-like 2 (EC 5.2.1.8)|
           (PPIase) (Rotamase) (Cyclophilin-60) (Cyclophilin-like
           protein Cyp-60)
          Length = 520

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 154 GLVFMLANYLPWVAKYG 104
           G+VF L N +PW+ KYG
Sbjct: 58  GIVFDLLNIVPWLKKYG 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,234,677
Number of Sequences: 219361
Number of extensions: 372419
Number of successful extensions: 744
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 80,573,946
effective HSP length: 28
effective length of database: 74,431,838
effective search space used: 1786364112
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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