ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart45f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_642264.1| Dictyostelium discoideum hypothetical protein (... 40 1.9
2emb|AL451049.11| Human DNA sequence from clone RP11-63A2 on chro... 40 1.9
3emb|AL929229.6| Zebrafish DNA sequence from clone CH211-1E14 in ... 40 1.9
4emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chr... 40 1.9
5gb|AC109157.10| Mus musculus chromosome 7, clone RP24-169M16, co... 38 7.7
6ref|XM_629594.1| Dictyostelium discoideum hypothetical protein (... 38 7.7
7gb|AC024797.1| Caenorhabditis elegans cosmid Y48G8AR, complete s... 38 7.7
8gb|AY714780.1| Homo sapiens carboxypeptidase B2 (plasma, carboxy... 38 7.7
9gb|AC139321.4| Mus musculus BAC clone RP24-425N6 from chromosome... 38 7.7
10gb|AC005103.3| Homo sapiens BAC clone CTA-357J21 from 7, complet... 38 7.7
11gb|AC110262.12| Mus musculus chromosome 17, clone RP23-291L10, c... 38 7.7
12emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 ... 38 7.7
13gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome... 38 7.7
14gb|AC117222.3| Mus musculus BAC clone RP23-347H12 from chromosom... 38 7.7
15gb|AC121791.3| Mus musculus BAC clone RP23-401H19 from chromosom... 38 7.7
16emb|CR361566.15| Zebrafish DNA sequence from clone CH211-248E11 ... 38 7.7
17gb|AF047825.1| Homo sapiens PAC 50H2 in the CUTL1 locus, complet... 38 7.7
18gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, com... 38 7.7
19emb|AL589740.4| Human DNA sequence from clone RP11-436D23 on chr... 38 7.7
20emb|AL137141.10| Human DNA sequence from clone RP11-139H14 on ch... 38 7.7
21gb|AC098798.4| Homo sapiens chromosome 4 clone RP11-579K7, compl... 38 7.7
22emb|AL591391.5| Zebrafish DNA sequence from clone BUSM1-186F8 in... 38 7.7
23emb|AL591497.2| Zebrafish DNA sequence from clone BUSM1-173M20 i... 38 7.7
24emb|BX000980.13| Zebrafish DNA sequence from clone CH211-136D9, ... 38 7.7
25emb|BX248241.20| Zebrafish DNA sequence from clone DKEY-22K18 in... 38 7.7
26emb|CR382339.9| Zebrafish DNA sequence from clone CH211-129E5 in... 38 7.7
27emb|CR555301.4| Zebrafish DNA sequence from clone CH211-129A13 i... 38 7.7
28gb|AC108941.4| Homo sapiens BAC clone RP11-736K12 from 4, comple... 38 7.7
29gb|AC008627.7| Homo sapiens chromosome 5 clone CTB-160O22, compl... 38 7.7
30dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.7
31emb|BX088536.8| Zebrafish DNA sequence from clone CH211-186M20 i... 38 7.7
32gb|AC108022.3| Homo sapiens BAC clone RP11-9D8 from 4, complete ... 38 7.7
33gb|AC129176.6| Mus musculus BAC clone RP23-124D10 from chromosom... 38 7.7
34gb|AC096678.4| Pan troglodytes clone RP43-140G16, complete sequence 38 7.7
35gb|AC093124.3| Papio anubis clone RP41-216E17, complete sequence 38 7.7
36emb|BX284622.3| Zebrafish DNA sequence from clone DKEY-174P10 in... 38 7.7
37emb|BX247871.7| Zebrafish DNA sequence from clone CH211-190P8, c... 38 7.7
38dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.7
39emb|BX323829.16| Zebrafish DNA sequence from clone RP71-14B1 in ... 38 7.7
40emb|AL844870.6| Zebrafish DNA sequence from clone BUSM1-169I8 in... 38 7.7
41emb|AL591482.3| Zebrafish DNA sequence from clone BUSM1-116C14 i... 38 7.7
42gb|AC149271.5| Mus musculus chromosome 7, clone RP23-216J17, com... 38 7.7
43gb|AF133636.1|AF133636 Ostrinia nubilalis isolate BZ1a pheromone... 38 7.7
44emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 ... 38 7.7
45dbj|AB041645.1| Mus musculus gene for ESP-1, complete cds 38 7.7

>ref|XM_642264.1| Dictyostelium discoideum hypothetical protein (DDB0189592), partial
           mRNA
          Length = 3192

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 57  taaacattcaacaactctga 76
           ||||||||||||||||||||
Sbjct: 396 taaacattcaacaactctga 377



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>emb|AL451049.11| Human DNA sequence from clone RP11-63A2 on chromosome 10 Contains a
             novel gene and a CpG island, complete sequence
          Length = 166973

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gcaaaataacccttttgata 35
             ||||||||||||||||||||
Sbjct: 76561 gcaaaataacccttttgata 76542



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>emb|AL929229.6| Zebrafish DNA sequence from clone CH211-1E14 in linkage group 18,
             complete sequence
          Length = 184794

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    taaacattcaacaactctga 76
             ||||||||||||||||||||
Sbjct: 67303 taaacattcaacaactctga 67284



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>emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chromosome 2, complete
             sequence
          Length = 205184

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   ctaacataaagaccaaaccc 155
             ||||||||||||||||||||
Sbjct: 61560 ctaacataaagaccaaaccc 61541



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>gb|AC109157.10| Mus musculus chromosome 7, clone RP24-169M16, complete sequence
          Length = 164968

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     cttttgatattaaatcaca 45
              |||||||||||||||||||
Sbjct: 156354 cttttgatattaaatcaca 156336



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>ref|XM_629594.1| Dictyostelium discoideum hypothetical protein (DDB0184369), partial
            mRNA
          Length = 2052

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 47   aaacatttggtaaacattcaaca 69
            ||||||||||| |||||||||||
Sbjct: 1321 aaacatttggtgaacattcaaca 1299



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>gb|AC024797.1| Caenorhabditis elegans cosmid Y48G8AR, complete sequence
          Length = 46975

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    aaatcacagaaacatttgg 56
             |||||||||||||||||||
Sbjct: 45901 aaatcacagaaacatttgg 45919



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>gb|AY714780.1| Homo sapiens carboxypeptidase B2 (plasma, carboxypeptidase U) (CPB2)
            gene, complete cds
          Length = 55829

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 42   cacagaaacatttggtaaa 60
            |||||||||||||||||||
Sbjct: 4286 cacagaaacatttggtaaa 4268



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>gb|AC139321.4| Mus musculus BAC clone RP24-425N6 from chromosome 1, complete sequence
          Length = 148379

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    tattaaatcacagaaacat 52
             |||||||||||||||||||
Sbjct: 59756 tattaaatcacagaaacat 59774



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>gb|AC005103.3| Homo sapiens BAC clone CTA-357J21 from 7, complete sequence
          Length = 146006

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 18    aaaataacccttttgatattaaa 40
             ||||||||| |||||||||||||
Sbjct: 38060 aaaataacctttttgatattaaa 38038



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>gb|AC110262.12| Mus musculus chromosome 17, clone RP23-291L10, complete sequence
          Length = 210850

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 47    aaacatttggtaaacattc 65
             |||||||||||||||||||
Sbjct: 73293 aaacatttggtaaacattc 73275



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>emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 in linkage group 7,
              complete sequence
          Length = 208436

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     taaatcacagaaacatttg 55
              |||||||||||||||||||
Sbjct: 195382 taaatcacagaaacatttg 195400



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>gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome 17, complete
            sequence
          Length = 220013

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 47   aaacatttggtaaacattc 65
            |||||||||||||||||||
Sbjct: 5328 aaacatttggtaaacattc 5346



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>gb|AC117222.3| Mus musculus BAC clone RP23-347H12 from chromosome 16, complete sequence
          Length = 200746

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     taaatcacagaaacatttg 55
              |||||||||||||||||||
Sbjct: 107667 taaatcacagaaacatttg 107649



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>gb|AC121791.3| Mus musculus BAC clone RP23-401H19 from chromosome 14, complete sequence
          Length = 197720

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      ggaaaccaatgagggcaaa 20
              |||||||||||||||||||
Sbjct: 177802 ggaaaccaatgagggcaaa 177820



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>emb|CR361566.15| Zebrafish DNA sequence from clone CH211-248E11 in linkage group 8,
            complete sequence
          Length = 182427

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 57   taaacattcaacaactctg 75
            |||||||||||||||||||
Sbjct: 5393 taaacattcaacaactctg 5375



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>gb|AF047825.1| Homo sapiens PAC 50H2 in the CUTL1 locus, complete sequence
          Length = 151964

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 18     aaaataacccttttgatattaaa 40
              ||||||||| |||||||||||||
Sbjct: 110559 aaaataacctttttgatattaaa 110581



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>gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, complete sequence
          Length = 191999

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    cttttgatattaaatcaca 45
             |||||||||||||||||||
Sbjct: 84152 cttttgatattaaatcaca 84134



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>emb|AL589740.4| Human DNA sequence from clone RP11-436D23 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 187863

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 49    acatttggtaaacattcaa 67
             |||||||||||||||||||
Sbjct: 59378 acatttggtaaacattcaa 59396



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>emb|AL137141.10| Human DNA sequence from clone RP11-139H14 on chromosome 13 Contains the
              5' end of the CPB2 gene for carboxypeptidase B2 (plasma,
              carboxypeptidase U), 2 novel genes, the LCP1 gene for
              lymphocyte cytosolic protein 1 (L-plastin) and a CpG
              Island, complete sequence
          Length = 180680

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     cacagaaacatttggtaaa 60
              |||||||||||||||||||
Sbjct: 149509 cacagaaacatttggtaaa 149491



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>gb|AC098798.4| Homo sapiens chromosome 4 clone RP11-579K7, complete sequence
          Length = 76445

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    aaataacccttttgatatt 37
             |||||||||||||||||||
Sbjct: 60697 aaataacccttttgatatt 60679



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>emb|AL591391.5| Zebrafish DNA sequence from clone BUSM1-186F8 in linkage group 7
             Contains the nitr1a_3 gene for novel immune-type receptor
             1a, allele 3, the nitr1c_3 gene for novel immune-type
             receptor 1c, allele 3, the nitr2e_1 gene for novel
             immune-type receptor 2e, allele 1, the nitr1b_2 gene for
             novel immune-ype receptor 1b, allele 2, the nitr2a_3 gene
             for novel immune-type receptor 2a, allele 3, the nitr2b_1
             gene for novel immune-type receptor 2b, allele 1, the
             nitr1f_1 gene for novel immune-type receptor 1f, allele 1,
             a novel immune-type receptor 2c pseudogene, the nitr3d_3
             gene for novel immune-type receptor 3d, allele 3, the
             nitr1h_1 gene for novel immune-type receptor 1h, allele 1,
             the nitr1d_5 gene for novel immune-type receptor 1d,
             allele 5 and two novel immune-type receptor 1 pseudogenes,
             complete sequence
          Length = 97640

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    taaatcacagaaacatttg 55
             |||||||||||||||||||
Sbjct: 42381 taaatcacagaaacatttg 42399



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>emb|AL591497.2| Zebrafish DNA sequence from clone BUSM1-173M20 in linkage group 7
             Contains the nitr1.14, nitr1.17, nitr1.18, nitr2.4,
             nitr2.6, nitr3r.2, nitr1.13, nitr1.15, nitr1.16, nitr2.5,
             nitr3.4 and nitr3r.1 genes for novel immune-type receptors
             and a nitr pseudogene, complete sequence
          Length = 127998

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    taaatcacagaaacatttg 55
             |||||||||||||||||||
Sbjct: 68415 taaatcacagaaacatttg 68397



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>emb|BX000980.13| Zebrafish DNA sequence from clone CH211-136D9, complete sequence
          Length = 169191

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    taaacattcaacaactctg 75
             |||||||||||||||||||
Sbjct: 50559 taaacattcaacaactctg 50541



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>emb|BX248241.20| Zebrafish DNA sequence from clone DKEY-22K18 in linkage group 19,
            complete sequence
          Length = 101595

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 54   tggtaaacattcaacaact 72
            |||||||||||||||||||
Sbjct: 1600 tggtaaacattcaacaact 1582



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>emb|CR382339.9| Zebrafish DNA sequence from clone CH211-129E5 in linkage group 13,
             complete sequence
          Length = 169923

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    taaatcacagaaacatttg 55
             |||||||||||||||||||
Sbjct: 66189 taaatcacagaaacatttg 66171



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>emb|CR555301.4| Zebrafish DNA sequence from clone CH211-129A13 in linkage group 13,
             complete sequence
          Length = 168518

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    taaatcacagaaacatttg 55
             |||||||||||||||||||
Sbjct: 48681 taaatcacagaaacatttg 48663



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>gb|AC108941.4| Homo sapiens BAC clone RP11-736K12 from 4, complete sequence
          Length = 179273

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    ggcaaaataacccttttga 33
             |||||||||||||||||||
Sbjct: 83077 ggcaaaataacccttttga 83059



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>gb|AC008627.7| Homo sapiens chromosome 5 clone CTB-160O22, complete sequence
          Length = 153553

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    ttaaatcacagaaacattt 54
             |||||||||||||||||||
Sbjct: 99021 ttaaatcacagaaacattt 99039



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 23       aacccttttgatattaaat 41
                |||||||||||||||||||
Sbjct: 23818908 aacccttttgatattaaat 23818890



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>emb|BX088536.8| Zebrafish DNA sequence from clone CH211-186M20 in linkage group 14,
             complete sequence
          Length = 104242

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    taaacattcaacaactctg 75
             |||||||||||||||||||
Sbjct: 68497 taaacattcaacaactctg 68515



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>gb|AC108022.3| Homo sapiens BAC clone RP11-9D8 from 4, complete sequence
          Length = 162609

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 18     aaaataacccttttgatat 36
              |||||||||||||||||||
Sbjct: 105844 aaaataacccttttgatat 105862



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>gb|AC129176.6| Mus musculus BAC clone RP23-124D10 from chromosome unknown, complete
              sequence
          Length = 211031

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 138    aacataaagaccaaacccc 156
              |||||||||||||||||||
Sbjct: 185013 aacataaagaccaaacccc 184995



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>gb|AC096678.4| Pan troglodytes clone RP43-140G16, complete sequence
          Length = 95528

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 18    aaaataacccttttgatattaaa 40
             ||||||||| |||||||||||||
Sbjct: 27332 aaaataacctttttgatattaaa 27310



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>gb|AC093124.3| Papio anubis clone RP41-216E17, complete sequence
          Length = 190322

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 18    aaaataacccttttgatattaaa 40
             ||||||||| |||||||||||||
Sbjct: 48475 aaaataacctttttgatattaaa 48453



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>emb|BX284622.3| Zebrafish DNA sequence from clone DKEY-174P10 in linkage group 19,
              complete sequence
          Length = 126451

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 54     tggtaaacattcaacaact 72
              |||||||||||||||||||
Sbjct: 126051 tggtaaacattcaacaact 126033



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>emb|BX247871.7| Zebrafish DNA sequence from clone CH211-190P8, complete sequence
          Length = 145789

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 57     taaacattcaacaactctg 75
              |||||||||||||||||||
Sbjct: 117831 taaacattcaacaactctg 117813



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>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0030C08
          Length = 163423

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    aacccttttgatattaaat 41
             |||||||||||||||||||
Sbjct: 40574 aacccttttgatattaaat 40556



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>emb|BX323829.16| Zebrafish DNA sequence from clone RP71-14B1 in linkage group 18, complete
              sequence
          Length = 148650

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     taaacattcaacaactctg 75
              |||||||||||||||||||
Sbjct: 142962 taaacattcaacaactctg 142980



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>emb|AL844870.6| Zebrafish DNA sequence from clone BUSM1-169I8 in linkage group 7,
             complete sequence
          Length = 132503

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    taaatcacagaaacatttg 55
             |||||||||||||||||||
Sbjct: 15004 taaatcacagaaacatttg 14986



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>emb|AL591482.3| Zebrafish DNA sequence from clone BUSM1-116C14 in linkage group 7,
             complete sequence
          Length = 95364

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    taaatcacagaaacatttg 55
             |||||||||||||||||||
Sbjct: 47963 taaatcacagaaacatttg 47981



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>gb|AC149271.5| Mus musculus chromosome 7, clone RP23-216J17, complete sequence
          Length = 213512

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 138    aacataaagaccaaacccc 156
              |||||||||||||||||||
Sbjct: 119239 aacataaagaccaaacccc 119257



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>gb|AF133636.1|AF133636 Ostrinia nubilalis isolate BZ1a pheromone binding protein (PBP) gene,
            complete cds
          Length = 1468

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 58   aaacattcaacaactctga 76
            |||||||||||||||||||
Sbjct: 1380 aaacattcaacaactctga 1362



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>emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 in linkage group 7,
             complete sequence
          Length = 112025

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    taaatcacagaaacatttg 55
             |||||||||||||||||||
Sbjct: 46077 taaatcacagaaacatttg 46095



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>dbj|AB041645.1| Mus musculus gene for ESP-1, complete cds
          Length = 17405

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 47   aaacatttggtaaacattc 65
            |||||||||||||||||||
Sbjct: 1152 aaacatttggtaaacattc 1134


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,544,236
Number of Sequences: 3902068
Number of extensions: 1544236
Number of successful extensions: 112496
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112382
Number of HSP's gapped (non-prelim): 114
length of query: 159
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 137
effective length of database: 17,147,199,772
effective search space: 2349166368764
effective search space used: 2349166368764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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