ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart45f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4,... 188 9e-45
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 188 9e-45
3dbj|AK106058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 9e-45
4ref|XM_472739.1| Oryza sativa (japonica cultivar-group), predic... 184 1e-43
5ref|XM_472738.1| Oryza sativa (japonica cultivar-group), predic... 127 3e-26
6dbj|AK104444.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 3e-26
7dbj|AK059553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 3e-26
8gb|AY108337.1| Zea mays PCO116943 mRNA sequence 123 5e-25
9ref|XM_466392.1| Oryza sativa (japonica cultivar-group), mRNA 56 9e-05
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
11dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
12dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
13dbj|AK109600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
14emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in... 48 0.021
15ref|XM_385445.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 44 0.33
16gb|AC025277.10| Homo sapiens chromosome 16 clone CTD-3229J4, com... 42 1.3
17emb|AL606508.12| Mouse DNA sequence from clone RP23-180B9 on chr... 42 1.3
18gb|AY122103.1| Drosophila melanogaster GH10091 full insert cDNA 42 1.3
19ref|NM_168931.1| Drosophila melanogaster CG32445-RA (CG32445), mRNA 42 1.3
20gb|AC010701.3| Drosophila melanogaster 3L BAC RP98-26P10 (Roswel... 42 1.3
21gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76... 42 1.3
22emb|AL807247.10| Mouse DNA sequence from clone RP23-178D3 on chr... 42 1.3
23gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 5.2
24gb|AC102418.9| Mus musculus chromosome 3, clone RP24-499L10, com... 40 5.2
25ref|XM_470761.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
26gb|BT016428.1| Zea mays clone Contig261 mRNA sequence 40 5.2
27gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 5.2
28gb|AC131695.4| Mus musculus BAC clone RP23-396F8 from chromosome... 40 5.2
29gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 5.2
30gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.2
31gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 geno... 40 5.2
32emb|CR318662.11| Zebrafish DNA sequence from clone CH211-213L7 i... 40 5.2
33emb|Z97629.1|HS128N22 Human DNA sequence from clone RP1-128N22 o... 40 5.2
34ref|XM_504921.1| Yarrowia lipolytica CLIB122, YALI0F02827g predi... 40 5.2
35gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 5.2
36emb|AL356798.18| Human DNA sequence from clone RP11-467B11 on ch... 40 5.2
37gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 5.2
38emb|AL031075.1|HS789O11 Human DNA sequence from clone RP4-789O11... 40 5.2
39emb|BX055567.1|CNS09F1F Single read from an extremity of a full-... 40 5.2
40emb|BX040837.1|CNS093O9 Single read from an extremity of a full-... 40 5.2
41emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.2
42emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 40 5.2
43emb|AJ811698.1| Corallococcus coralloides partial gyrB gene for ... 40 5.2
44gb|AE005964.1| Caulobacter crescentus CB15 section 290 of 359 of... 40 5.2
45gb|AF159497.1| Propionibacterium freudenreichii subsp. shermanii... 40 5.2
46gb|AE011770.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.2
47gb|AC072044.9| Homo sapiens 3 BAC RP11-213O23 (Roswell Park Canc... 40 5.2
48gb|AC125145.3| Mus musculus BAC clone RP24-347B7 from chromosome... 40 5.2
49dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
50dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
51dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
52gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) ch... 40 5.2
53gb|AC154686.2| Mus musculus BAC clone RP24-327C20 from chromosom... 40 5.2
54gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Canc... 40 5.2
55gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 40 5.2
56gb|AC154228.1| Mus musculus BAC clone RP24-143I4 from chromosome... 40 5.2
57dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
58emb|Z50182.1|RSMGPGN R.sphaeroides mgpS gene and putative open r... 40 5.2
59ref|XM_310539.2| Anopheles gambiae str. PEST ENSANGP00000017317 ... 40 5.2
60dbj|AK069332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
61gb|AY108564.1| Zea mays PCO119136 mRNA sequence 40 5.2
62gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
63gb|AC147371.4| Mus musculus BAC clone RP24-247D2 from 6, complet... 40 5.2
64emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 5.2
65dbj|AP004912.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 5.2 
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
             complete sequence
          Length = 138969

 Score =  188 bits (95), Expect = 9e-45
 Identities = 143/159 (89%)
 Strand = Plus / Minus

                                                                         
Query: 215   agctagaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtg 274
             ||||||||||||||||||| |  |||||||||| ||||||||||||||||||| ||||| 
Sbjct: 88861 agctagaaggagaacttgaaggccatgtcgtgcctgtacacctggccgggcctgaccgtc 88802

                                                                         
Query: 275   accgacgggaactcggggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaac 334
             |  || |||||||| ||||||||||||||||||  |||| |||||||||| ||||| |||
Sbjct: 88801 atggaggggaactccgggtggttcacggcgtccacgtacccctgcgtctccaggcagaac 88742

                                                    
Query: 335   ccgccgtactgctcgtacaccttgccgcccttgcccttg 373
             ||||||||||||| |||||||||||||||||||||||||
Sbjct: 88741 ccgccgtactgctggtacaccttgccgcccttgcccttg 88703



 Score =  127 bits (64), Expect = 3e-26
 Identities = 133/156 (85%)
 Strand = Plus / Minus

                                                                         
Query: 217   ctagaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtgac 276
             |||||| |||||||||   | ||| ||||||||||||||||| |||||||||||  | ||
Sbjct: 81940 ctagaacgagaacttgtacaccatctcgtgcttgtacacctgtccgggcctcacgatcac 81881

                                                                         
Query: 277   cgacgggaactcggggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaaccc 336
             ||||||||| | |||||||||||||||||| ||| || |||||||||| ||||| | | |
Sbjct: 81880 cgacgggaagttggggtggttcacggcgtcggggaacccctgcgtctccaggcacagcgc 81821

                                                 
Query: 337   gccgtactgctcgtacaccttgccgcccttgccctt 372
             |||||||||| ||||| |||| |||||||| |||||
Sbjct: 81820 gccgtactgcccgtacgccttcccgcccttcccctt 81785
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  188 bits (95), Expect = 9e-45
 Identities = 143/159 (89%)
 Strand = Plus / Minus

                                                                            
Query: 215      agctagaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtg 274
                ||||||||||||||||||| |  |||||||||| ||||||||||||||||||| ||||| 
Sbjct: 22880086 agctagaaggagaacttgaaggccatgtcgtgcctgtacacctggccgggcctgaccgtc 22880027

                                                                            
Query: 275      accgacgggaactcggggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaac 334
                |  || |||||||| ||||||||||||||||||  |||| |||||||||| ||||| |||
Sbjct: 22880026 atggaggggaactccgggtggttcacggcgtccacgtacccctgcgtctccaggcagaac 22879967

                                                       
Query: 335      ccgccgtactgctcgtacaccttgccgcccttgcccttg 373
                ||||||||||||| |||||||||||||||||||||||||
Sbjct: 22879966 ccgccgtactgctggtacaccttgccgcccttgcccttg 22879928



 Score =  127 bits (64), Expect = 3e-26
 Identities = 133/156 (85%)
 Strand = Plus / Minus

                                                                            
Query: 217      ctagaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtgac 276
                |||||| |||||||||   | ||| ||||||||||||||||| |||||||||||  | ||
Sbjct: 22873165 ctagaacgagaacttgtacaccatctcgtgcttgtacacctgtccgggcctcacgatcac 22873106

                                                                            
Query: 277      cgacgggaactcggggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaaccc 336
                ||||||||| | |||||||||||||||||| ||| || |||||||||| ||||| | | |
Sbjct: 22873105 cgacgggaagttggggtggttcacggcgtcggggaacccctgcgtctccaggcacagcgc 22873046

                                                    
Query: 337      gccgtactgctcgtacaccttgccgcccttgccctt 372
                |||||||||| ||||| |||| |||||||| |||||
Sbjct: 22873045 gccgtactgcccgtacgccttcccgcccttcccctt 22873010
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>dbj|AK106058.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F10, full
            insert sequence
          Length = 1343

 Score =  188 bits (95), Expect = 9e-45
 Identities = 143/159 (89%)
 Strand = Plus / Minus

                                                                        
Query: 215  agctagaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtg 274
            ||||||||||||||||||| |  |||||||||| ||||||||||||||||||| ||||| 
Sbjct: 1154 agctagaaggagaacttgaaggccatgtcgtgcctgtacacctggccgggcctgaccgtc 1095

                                                                        
Query: 275  accgacgggaactcggggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaac 334
            |  || |||||||| ||||||||||||||||||  |||| |||||||||| ||||| |||
Sbjct: 1094 atggaggggaactccgggtggttcacggcgtccacgtacccctgcgtctccaggcagaac 1035

                                                   
Query: 335  ccgccgtactgctcgtacaccttgccgcccttgcccttg 373
            ||||||||||||| |||||||||||||||||||||||||
Sbjct: 1034 ccgccgtactgctggtacaccttgccgcccttgcccttg 996
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>ref|XM_472739.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1092

 Score =  184 bits (93), Expect = 1e-43
 Identities = 141/157 (89%)
 Strand = Plus / Minus

                                                                        
Query: 217  ctagaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtgac 276
            ||||||||||||||||| |  |||||||||| ||||||||||||||||||| ||||| | 
Sbjct: 1092 ctagaaggagaacttgaaggccatgtcgtgcctgtacacctggccgggcctgaccgtcat 1033

                                                                        
Query: 277  cgacgggaactcggggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaaccc 336
             || |||||||| ||||||||||||||||||  |||| |||||||||| ||||| |||||
Sbjct: 1032 ggaggggaactccgggtggttcacggcgtccacgtacccctgcgtctccaggcagaaccc 973

                                                 
Query: 337  gccgtactgctcgtacaccttgccgcccttgcccttg 373
            ||||||||||| |||||||||||||||||||||||||
Sbjct: 972  gccgtactgctggtacaccttgccgcccttgcccttg 936
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>ref|XM_472738.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1206

 Score =  127 bits (64), Expect = 3e-26
 Identities = 133/156 (85%)
 Strand = Plus / Minus

                                                                        
Query: 217  ctagaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtgac 276
            |||||| |||||||||   | ||| ||||||||||||||||| |||||||||||  | ||
Sbjct: 1206 ctagaacgagaacttgtacaccatctcgtgcttgtacacctgtccgggcctcacgatcac 1147

                                                                        
Query: 277  cgacgggaactcggggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaaccc 336
            ||||||||| | |||||||||||||||||| ||| || |||||||||| ||||| | | |
Sbjct: 1146 cgacgggaagttggggtggttcacggcgtcggggaacccctgcgtctccaggcacagcgc 1087

                                                
Query: 337  gccgtactgctcgtacaccttgccgcccttgccctt 372
            |||||||||| ||||| |||| |||||||| |||||
Sbjct: 1086 gccgtactgcccgtacgccttcccgcccttcccctt 1051
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>dbj|AK104444.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-H06, full
            insert sequence
          Length = 1285

 Score =  127 bits (64), Expect = 3e-26
 Identities = 133/156 (85%)
 Strand = Plus / Minus

                                                                        
Query: 217  ctagaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtgac 276
            |||||| |||||||||   | ||| ||||||||||||||||| |||||||||||  | ||
Sbjct: 1172 ctagaacgagaacttgtacaccatatcgtgcttgtacacctgtccgggcctcacgatcac 1113

                                                                        
Query: 277  cgacgggaactcggggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaaccc 336
            ||||||||| | |||||||||||||||||| ||| || |||||||||| ||||| | | |
Sbjct: 1112 cgacgggaagttggggtggttcacggcgtcggggaacccctgcgtctccaggcacagcgc 1053

                                                
Query: 337  gccgtactgctcgtacaccttgccgcccttgccctt 372
            |||||||||| ||||| |||| |||||||| |||||
Sbjct: 1052 gccgtactgcccgtacgccttcccgcccttcccctt 1017
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>dbj|AK059553.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G05, full
            insert sequence
          Length = 1329

 Score =  127 bits (64), Expect = 3e-26
 Identities = 133/156 (85%)
 Strand = Plus / Minus

                                                                        
Query: 217  ctagaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtgac 276
            |||||| |||||||||   | ||| ||||||||||||||||| |||||||||||  | ||
Sbjct: 1196 ctagaacgagaacttgtacaccatctcgtgcttgtacacctgtccgggcctcacgatcac 1137

                                                                        
Query: 277  cgacgggaactcggggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaaccc 336
            ||||||||| | |||||||||||||||||| ||| || |||||||||| ||||| | | |
Sbjct: 1136 cgacgggaagttggggtggttcacggcgtcggggaacccctgcgtctccaggcacagcgc 1077

                                                
Query: 337  gccgtactgctcgtacaccttgccgcccttgccctt 372
            |||||||||| ||||| |||| |||||||| |||||
Sbjct: 1076 gccgtactgcccgtacgccttcccgcccttcccctt 1041
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>gb|AY108337.1| Zea mays PCO116943 mRNA sequence
          Length = 500

 Score =  123 bits (62), Expect = 5e-25
 Identities = 134/158 (84%)
 Strand = Plus / Minus

                                                                       
Query: 216 gctagaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtga 275
           ||||||||||||||||||  | ||||||||||||||||||||| || ||||| ||  |  
Sbjct: 328 gctagaaggagaacttgaacaccatgtcgtgcttgtacacctgccccggcctgacgatct 269

                                                                       
Query: 276 ccgacgggaactcggggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaacc 335
             || ||||| | ||||||||| |||||||||||| || |||||||||| ||||| | | 
Sbjct: 268 gggaggggaaattggggtggttgacggcgtccgggaacccctgcgtctcgaggcacagcg 209

                                                 
Query: 336 cgccgtactgctcgtacaccttgccgcccttgcccttg 373
           |||||||||||| |||||||||||||||||| ||||||
Sbjct: 208 cgccgtactgctggtacaccttgccgcccttccccttg 171
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>ref|XM_466392.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1299

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 290  gggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaacccgccgtactgctcg 349
            ||||||||||||||||| ||| || |||||||||| | ||| | | |||||||| |  ||
Sbjct: 1096 gggtggttcacggcgtcggggaacccctgcgtctccaagcacagcgcgccgtaccggccg 1037

                                
Query: 350  tacaccttgccgcccttgcc 369
            |||||| | |||||||||||
Sbjct: 1036 tacaccctcccgcccttgcc 1017
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                            
Query: 290      gggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaacccgccgtactgctcg 349
                ||||||||||||||||| ||| || |||||||||| | ||| | | |||||||| |  ||
Sbjct: 22124192 gggtggttcacggcgtcggggaacccctgcgtctccaagcacagcgcgccgtaccggccg 22124133

                                    
Query: 350      tacaccttgccgcccttgcc 369
                |||||| | |||||||||||
Sbjct: 22124132 tacaccctcccgcccttgcc 22124113
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>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0703B01
          Length = 137445

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                         
Query: 290   gggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaacccgccgtactgctcg 349
             ||||||||||||||||| ||| || |||||||||| | ||| | | |||||||| |  ||
Sbjct: 98091 gggtggttcacggcgtcggggaacccctgcgtctccaagcacagcgcgccgtaccggccg 98032

                                 
Query: 350   tacaccttgccgcccttgcc 369
             |||||| | |||||||||||
Sbjct: 98031 tacaccctcccgcccttgcc 98012
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>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1342F01
          Length = 153287

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                         
Query: 290   gggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaacccgccgtactgctcg 349
             ||||||||||||||||| ||| || |||||||||| | ||| | | |||||||| |  ||
Sbjct: 20036 gggtggttcacggcgtcggggaacccctgcgtctccaagcacagcgcgccgtaccggccg 19977

                                 
Query: 350   tacaccttgccgcccttgcc 369
             |||||| | |||||||||||
Sbjct: 19976 tacaccctcccgcccttgcc 19957
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>dbj|AK109600.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-E04, full
            insert sequence
          Length = 1324

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 290  gggtggttcacggcgtccgggtacgcctgcgtctcaaggcaaaacccgccgtactgctcg 349
            ||||||||||||||||| ||| || |||||||||| | ||| | | |||||||| |  ||
Sbjct: 1096 gggtggttcacggcgtcggggaacccctgcgtctccaagcacagcgcgccgtaccggccg 1037

                                
Query: 350  tacaccttgccgcccttgcc 369
            |||||| | |||||||||||
Sbjct: 1036 tacaccctcccgcccttgcc 1017
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>emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in linkage group 16,
              complete sequence
          Length = 201353

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 53     atatgaatttatttttcaaataccgtat 80
              ||||||||||||||||||||||| ||||
Sbjct: 178061 atatgaatttatttttcaaatactgtat 178034
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>ref|XM_385445.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05269.1)
            partial mRNA
          Length = 3132

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 352  caccttgccgcccttgcccttg 373
            ||||||||||||||||||||||
Sbjct: 1935 caccttgccgcccttgcccttg 1914
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>gb|AC025277.10| Homo sapiens chromosome 16 clone CTD-3229J4, complete sequence
          Length = 189032

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 51    acatatgaatttatttttcaa 71
             |||||||||||||||||||||
Sbjct: 46203 acatatgaatttatttttcaa 46183
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>emb|AL606508.12| Mouse DNA sequence from clone RP23-180B9 on chromosome 11 Contains the 3'
              end of a novel gene and a CpG island, complete sequence
          Length = 189315

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 52     catatgaatttatttttcaaa 72
              |||||||||||||||||||||
Sbjct: 115868 catatgaatttatttttcaaa 115888
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>gb|AY122103.1| Drosophila melanogaster GH10091 full insert cDNA
          Length = 1348

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 292  gtggttcacggcgtccgggtacgcctgcgtctc 324
            |||||||| |||||||||||||  |||||||||
Sbjct: 1108 gtggttcatggcgtccgggtacttctgcgtctc 1076
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>ref|NM_168931.1| Drosophila melanogaster CG32445-RA (CG32445), mRNA
          Length = 1329

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 292  gtggttcacggcgtccgggtacgcctgcgtctc 324
            |||||||| |||||||||||||  |||||||||
Sbjct: 1108 gtggttcatggcgtccgggtacttctgcgtctc 1076
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>gb|AC010701.3| Drosophila melanogaster 3L BAC RP98-26P10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 174920

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 292   gtggttcacggcgtccgggtacgcctgcgtctc 324
             |||||||| |||||||||||||  |||||||||
Sbjct: 29942 gtggttcatggcgtccgggtacttctgcgtctc 29974
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>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete
             sequence
          Length = 294272

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 292   gtggttcacggcgtccgggtacgcctgcgtctc 324
             |||||||| |||||||||||||  |||||||||
Sbjct: 59998 gtggttcatggcgtccgggtacttctgcgtctc 59966
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>emb|AL807247.10| Mouse DNA sequence from clone RP23-178D3 on chromosome 4, complete
             sequence
          Length = 184686

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 56    tgaatttatttttcaaatacc 76
             |||||||||||||||||||||
Sbjct: 40076 tgaatttatttttcaaatacc 40056
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 354     ccttgccgcccttgcccttg 373
               ||||||||||||||||||||
Sbjct: 1226600 ccttgccgcccttgcccttg 1226581
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>gb|AC102418.9| Mus musculus chromosome 3, clone RP24-499L10, complete sequence
          Length = 208274

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     aaacatatgaatttattttt 68
              ||||||||||||||||||||
Sbjct: 117563 aaacatatgaatttattttt 117544
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>ref|XM_470761.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1375

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 299  acggcgtccgggtacgcctgcgtctcaaggca 330
            ||||||||||||||  |||||||||| |||||
Sbjct: 1090 acggcgtccgggtagtcctgcgtctcgaggca 1059
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>gb|BT016428.1| Zea mays clone Contig261 mRNA sequence
          Length = 1373

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 91/112 (81%), Gaps = 2/112 (1%)
 Strand = Plus / Minus

                                                                        
Query: 220  gaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtgaccga 279
            |||||||||||| | ||||||||| ||  | ||||||| ||| ||||||||  |   |||
Sbjct: 1115 gaaggagaacttaaagagcatgtcatggctatacaccttgcccggcctcacgatctgcga 1056

                                                                
Query: 280  cgggaa-ctcggggtggttcacggcgtccgggtacgcctgcgtctcaaggca 330
            |||||| ||| |||||||| ||||| || ||| || |||||||||| |||||
Sbjct: 1055 cgggaagctc-gggtggttgacggcatcggggaacccctgcgtctcgaggca 1005
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 355     cttgccgcccttgcccttgg 374
               ||||||||||||||||||||
Sbjct: 1055116 cttgccgcccttgcccttgg 1055097
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>gb|AC131695.4| Mus musculus BAC clone RP23-396F8 from chromosome 6, complete sequence
          Length = 199679

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tgaatttatttttcaaatac 75
             ||||||||||||||||||||
Sbjct: 16128 tgaatttatttttcaaatac 16147
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 303     cgtccgggtacgcctgcgtc 322
               ||||||||||||||||||||
Sbjct: 1368112 cgtccgggtacgcctgcgtc 1368093
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 299      acggcgtccgggtacgcctgcgtctcaaggca 330
                ||||||||||||||  |||||||||| |||||
Sbjct: 14939026 acggcgtccgggtagtcctgcgtctcgaggca 14939057
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>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete
              sequence
          Length = 137184

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 299    acggcgtccgggtacgcctgcgtctcaaggca 330
              ||||||||||||||  |||||||||| |||||
Sbjct: 103736 acggcgtccgggtagtcctgcgtctcgaggca 103705
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>emb|CR318662.11| Zebrafish DNA sequence from clone CH211-213L7 in linkage group 10,
             complete sequence
          Length = 200648

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    atgaatttatttttcaaata 74
             ||||||||||||||||||||
Sbjct: 63348 atgaatttatttttcaaata 63367
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>emb|Z97629.1|HS128N22 Human DNA sequence from clone RP1-128N22 on chromosome Xq25-26.3,
            complete sequence
          Length = 98902

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   atgaatttatttttcaaata 74
            ||||||||||||||||||||
Sbjct: 9900 atgaatttatttttcaaata 9881
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>ref|XM_504921.1| Yarrowia lipolytica CLIB122, YALI0F02827g predicted mRNA
          Length = 423

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 ccttgccgcccttgcccttg 373
           ||||||||||||||||||||
Sbjct: 46  ccttgccgcccttgcccttg 27
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    ccttgccgcccttgcccttg 373
              ||||||||||||||||||||
Sbjct: 146596 ccttgccgcccttgcccttg 146615
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>emb|AL356798.18| Human DNA sequence from clone RP11-467B11 on chromosome 9 Contains part
             of the INVS gene for inversin, complete sequence
          Length = 118068

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tgaatttatttttcaaatac 75
             ||||||||||||||||||||
Sbjct: 26730 tgaatttatttttcaaatac 26711
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 354     ccttgccgcccttgcccttg 373
               ||||||||||||||||||||
Sbjct: 2572042 ccttgccgcccttgcccttg 2572023
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>emb|AL031075.1|HS789O11 Human DNA sequence from clone RP4-789O11 on chromosome Xq25 Contains
             part of the ODZ1 gene for odz, odd Oz/ten-m homolog
             1(Drosophila), complete sequence
          Length = 110127

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    atgaatttatttttcaaata 74
             ||||||||||||||||||||
Sbjct: 99666 atgaatttatttttcaaata 99647
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>emb|BX055567.1|CNS09F1F Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC34AH12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 832

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 365 ttgcccttggtgtggttgag 384
           ||||||||||||||||||||
Sbjct: 344 ttgcccttggtgtggttgag 325
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>emb|BX040837.1|CNS093O9 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC11DE11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 934

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 365 ttgcccttggtgtggttgag 384
           ||||||||||||||||||||
Sbjct: 330 ttgcccttggtgtggttgag 311
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 303     cgtccgggtacgcctgcgtc 322
               ||||||||||||||||||||
Sbjct: 2685529 cgtccgggtacgcctgcgtc 2685510
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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    gggcctcaccgtgaccgacg 281
              ||||||||||||||||||||
Sbjct: 171854 gggcctcaccgtgaccgacg 171835
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>emb|AJ811698.1| Corallococcus coralloides partial gyrB gene for gyrase B, strain
           DSM 51379
          Length = 1180

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 actgctcgtacaccttgccg 361
           ||||||||||||||||||||
Sbjct: 114 actgctcgtacaccttgccg 95
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>gb|AE005964.1| Caulobacter crescentus CB15 section 290 of 359 of the complete
           genome
          Length = 10554

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 ccttgccgcccttgcccttg 373
           ||||||||||||||||||||
Sbjct: 469 ccttgccgcccttgcccttg 488
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>gb|AF159497.1| Propionibacterium freudenreichii subsp. shermanii esterase and
            putative acyl-CoA dehydrogenase genes, complete cds
          Length = 3161

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 349  gtacaccttgccgcccttgc 368
            ||||||||||||||||||||
Sbjct: 1904 gtacaccttgccgcccttgc 1885
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>gb|AE011770.1| Xanthomonas axonopodis pv. citri str. 306,  section 148 of 469 of the
            complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 354  ccttgccgcccttgcccttggtgt 377
            |||||| |||||||||||||||||
Sbjct: 9824 ccttgctgcccttgcccttggtgt 9847
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>gb|AC072044.9| Homo sapiens 3 BAC RP11-213O23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178453

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tgaatttatttttcaaatac 75
             ||||||||||||||||||||
Sbjct: 92422 tgaatttatttttcaaatac 92403
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>gb|AC125145.3| Mus musculus BAC clone RP24-347B7 from chromosome 6, complete sequence
          Length = 186598

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tgaatttatttttcaaatac 75
             ||||||||||||||||||||
Sbjct: 14260 tgaatttatttttcaaatac 14241
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 52       catatgaatttatttttcaa 71
                ||||||||||||||||||||
Sbjct: 15114866 catatgaatttatttttcaa 15114885
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 51       acatatgaatttatttttcaaata 74
                |||||||||| |||||||||||||
Sbjct: 17329026 acatatgaatatatttttcaaata 17329049
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 299      acggcgtccgggtacgcctgcgtctcaaggca 330
                ||||||||||||||  |||||||||| |||||
Sbjct: 14933560 acggcgtccgggtagtcctgcgtctcgaggca 14933591
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>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11,
             complete sequence
          Length = 129420

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    catatgaatttatttttcaa 71
             ||||||||||||||||||||
Sbjct: 23479 catatgaatttatttttcaa 23498
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>gb|AC154686.2| Mus musculus BAC clone RP24-327C20 from chromosome 14, complete
             sequence
          Length = 181382

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tgaatttatttttcaaatac 75
             ||||||||||||||||||||
Sbjct: 23844 tgaatttatttttcaaatac 23825
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>gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166966

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     aacatatgaatttatttttcaaat 73
              ||||||||||||||||||| ||||
Sbjct: 140046 aacatatgaatttattttttaaat 140069
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     gaatttatttttcaaatacc 76
              ||||||||||||||||||||
Sbjct: 659504 gaatttatttttcaaatacc 659523
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>gb|AC154228.1| Mus musculus BAC clone RP24-143I4 from chromosome 14, complete
            sequence
          Length = 164697

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   tgaatttatttttcaaatac 75
            ||||||||||||||||||||
Sbjct: 6404 tgaatttatttttcaaatac 6423
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>dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0596H06
          Length = 142832

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    acatatgaatttatttttcaaata 74
             |||||||||| |||||||||||||
Sbjct: 65619 acatatgaatatatttttcaaata 65642
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>emb|Z50182.1|RSMGPGN R.sphaeroides mgpS gene and putative open reading frame
          Length = 3900

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  cttgccgcccttgcccttgg 374
            ||||||||||||||||||||
Sbjct: 3751 cttgccgcccttgcccttgg 3732
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>ref|XM_310539.2| Anopheles gambiae str. PEST ENSANGP00000017317 (ENSANGG00000014828),
            partial mRNA
          Length = 4026

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  cgtactgctcgtacaccttg 358
            ||||||||||||||||||||
Sbjct: 3247 cgtactgctcgtacaccttg 3228
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>dbj|AK069332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010L17, full
            insert sequence
          Length = 1375

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 299  acggcgtccgggtacgcctgcgtctcaaggca 330
            ||||||||||||||  |||||||||| |||||
Sbjct: 1090 acggcgtccgggtagtcctgcgtctcgaggca 1059
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>gb|AY108564.1| Zea mays PCO119136 mRNA sequence
          Length = 594

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 91/112 (81%), Gaps = 2/112 (1%)
 Strand = Plus / Minus

                                                                       
Query: 220 gaaggagaacttgaggagcatgtcgtgcttgtacacctggccgggcctcaccgtgaccga 279
           |||||||||||| | ||||||||| ||  | ||||||| ||| ||||||||  |   |||
Sbjct: 351 gaaggagaacttaaagagcatgtcatggctatacaccttgcccggcctcacgatctgcga 292

                                                               
Query: 280 cgggaa-ctcggggtggttcacggcgtccgggtacgcctgcgtctcaaggca 330
           |||||| ||| |||||||| ||||| || ||| || |||||||||| |||||
Sbjct: 291 cgggaagctc-gggtggttgacggcatcggggaacccctgcgtctcgaggca 241
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 52       catatgaatttatttttcaa 71
                ||||||||||||||||||||
Sbjct: 15123107 catatgaatttatttttcaa 15123126
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>gb|AC147371.4| Mus musculus BAC clone RP24-247D2 from 6, complete sequence
          Length = 178577

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   tgaatttatttttcaaatac 75
            ||||||||||||||||||||
Sbjct: 6240 tgaatttatttttcaaatac 6221
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    ccttgccgcccttgcccttg 373
              ||||||||||||||||||||
Sbjct: 407385 ccttgccgcccttgcccttg 407366
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>dbj|AP004912.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L19, TM0070,
             complete sequence
          Length = 128164

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ttgaatatgcactattgaac 31
             ||||||||||||||||||||
Sbjct: 67069 ttgaatatgcactattgaac 67050


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,882,140
Number of Sequences: 3902068
Number of extensions: 2882140
Number of successful extensions: 63003
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 62606
Number of HSP's gapped (non-prelim): 399
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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