ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart45e09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY108290.1| Zea mays PCO078770 mRNA sequence 170 2e-39
2ref|XM_482937.1| Oryza sativa (japonica cultivar-group), mRNA 163 6e-37
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
4dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
5ref|XM_606837.2| PREDICTED: Bos taurus similar to OG2 homeobox (... 42 1.5
6emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 ... 42 1.5
7gb|BC107341.1| Mus musculus developmental pluripotency-associate... 40 6.0
8gb|BC107340.1| Mus musculus developmental pluripotency-associate... 40 6.0
9ref|XM_878101.1| PREDICTED: Bos taurus CTSZ protein, transcript ... 40 6.0
10ref|XM_592880.2| PREDICTED: Bos taurus CTSZ protein, transcript ... 40 6.0
11ref|NM_139218.1| Mus musculus developmental pluripotency-associa... 40 6.0
12ref|XM_001006400.1| PREDICTED: Mus musculus similar to developme... 40 6.0
13ref|XM_885629.2| PREDICTED: Mus musculus similar to developmenta... 40 6.0
14ref|XM_909724.2| PREDICTED: Mus musculus similar to developmenta... 40 6.0
15gb|AC131715.3| Mus musculus BAC clone RP23-180N22 from chromosom... 40 6.0
16emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 6.0
17gb|AC037471.12| Homo sapiens chromosome 15, clone RP11-810K23, c... 40 6.0
18gb|AC127381.4| Homo sapiens BAC clone RP11-1360M22 from UL, comp... 40 6.0
19gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, com... 40 6.0
20gb|AY134859.1| Mus musculus compaction-associated protein 1 (Crg... 40 6.0
21gb|BC100331.1| Mus musculus developmental pluripotency-associate... 40 6.0
22gb|AC021585.7| Homo sapiens chromosome , clone RP11-96F3, comple... 40 6.0
23gb|BC099433.1| Mus musculus developmental pluripotency-associate... 40 6.0
24gb|AY082485.1| Mus musculus stella mRNA, complete cds 40 6.0
25emb|CR594233.1| full-length cDNA clone CS0DI067YI21 of Placenta ... 40 6.0
26gb|AF334830.1| Homo sapiens cartilage-hair hypoplasia region gen... 40 6.0
27gb|AF490476.1| Homo sapiens histidine triad nucleotide binding p... 40 6.0
28dbj|AK136263.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 6.0
29dbj|AK135769.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 6.0
30gb|AC126335.16| Homo sapiens chromosome 15, clone RP11-854K16, c... 40 6.0
31gb|AF490347.1| Mus musculus DPPA3 mRNA, complete cds 40 6.0
32gb|AC158651.12| Mus musculus BAC RP24-68I7 (Roswell Park Cancer... 40 6.0
33gb|BC033538.1| Homo sapiens, clone IMAGE:5163796, mRNA 40 6.0
34gb|AC127533.9| Homo sapiens chromosome 15, clone RP11-1363O20, c... 40 6.0
35gb|AC134676.5| Homo sapiens chromosome 15, clone CTD-2290E14, co... 40 6.0
36emb|AL133410.32| Human DNA sequence from clone RP11-112J3 on chr... 40 6.0
37emb|AL808133.17| Mouse DNA sequence from clone RP23-457N24 on ch... 40 6.0

>gb|AY108290.1| Zea mays PCO078770 mRNA sequence
          Length = 779

 Score =  170 bits (86), Expect = 2e-39
 Identities = 232/280 (82%), Gaps = 3/280 (1%)
 Strand = Plus / Minus

                                                                       
Query: 170 aggtggctaacatctccacacatcttgacaatgcagcggccagtgtcaccagaaacgagc 229
           |||||||| || || || ||||||||||| ||||| ||||| ||| |  | || ||||| 
Sbjct: 418 aggtggctgacgtccccgcacatcttgacgatgcaccggccggtggcgtcggacacgagg 359

                                                                       
Query: 230 acgacagtaaccgacgtgttgtgtattttgccgcgaagcggcat---gggactggcgtgc 286
           | |||  | |||||||||||||||||||||||| | |||||| |   |||||| ||||| 
Sbjct: 358 atgacgctcaccgacgtgttgtgtattttgccgtggagcggcttcgtgggactcgcgtgt 299

                                                                       
Query: 287 ctgtagagctctctgatggttcctccatgagataccaggataactcgctcccctctatgt 346
           |||||||||||||||||||| || ||||| || ||||||||||||||||||||| | |||
Sbjct: 298 ctgtagagctctctgatggtgccgccatgtgaaaccaggataactcgctcccctttgtgt 239

                                                                       
Query: 347 tcctcgactattttatacaggcatgagacacatcgctctgacagttgatcaaggctctct 406
           |   | || || |  |||||  | || ||||||||||| |||||||||||||| ||||||
Sbjct: 238 ttacccacaatgtcgtacagaaaagacacacatcgctccgacagttgatcaagactctct 179

                                                   
Query: 407 ccaccaccaggaatttgctggtttctcttgtgggacataa 446
           ||||||||||||| ||| || |||||||||||||||||||
Sbjct: 178 ccaccaccaggaacttgttgatttctcttgtgggacataa 139



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>ref|XM_482937.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 915

 Score =  163 bits (82), Expect = 6e-37
 Identities = 258/316 (81%), Gaps = 3/316 (0%)
 Strand = Plus / Minus

                                                                       
Query: 131 tcgcccccaaacgcattctccagaacaccggtggcctcaaggtggctaacatctccacac 190
           ||||| ||||| || || ||||||||||||||  ||| ||||||||| |  || || |||
Sbjct: 899 tcgccaccaaaggcgttttccagaacaccggtttccttaaggtggctgatgtccccgcac 840

                                                                       
Query: 191 atcttgacaatgcagcggccagtgtcaccagaaacgagcacgacagtaaccgacgtgttg 250
             |||||||||||| || |||||| ||||||| || || |  ||  | || || ||||||
Sbjct: 839 gccttgacaatgcaacgcccagtggcaccagacacaaggattacgcttacggatgtgttg 780

                                                                       
Query: 251 tgtattttgccgcgaagcggc---atgggactggcgtgcctgtagagctctctgatggtt 307
           ||||| || ||| |||| |||   || |||||||| ||||||||||| ||||||||||||
Sbjct: 779 tgtatcttaccgtgaagaggcttcattggactggcatgcctgtagagttctctgatggtt 720

                                                                       
Query: 308 cctccatgagataccaggataactcgctcccctctatgttcctcgactattttatacagg 367
           || || || || |||| ||| | ||||||||||  ||||| ||||||||| || |||| |
Sbjct: 719 ccaccgtgcgagaccaagattattcgctccccttgatgtttctcgactatgttgtacaag 660

                                                                       
Query: 368 catgagacacatcgctctgacagttgatcaaggctctctccaccaccaggaatttgctgg 427
           || ||||||||||||||||| ||||||||||| || ||||||||||||||||||||  ||
Sbjct: 659 caagagacacatcgctctgatagttgatcaagactttctccaccaccaggaatttgtcgg 600

                           
Query: 428 tttctcttgtgggaca 443
           || |||||||| ||||
Sbjct: 599 ttcctcttgtgcgaca 584



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                            
Query: 343      atgttcctcgactattttatacaggcatgagacacatcgctctgacagttgatcaaggct 402
                ||||| ||||||||| || |||| ||| ||||||||||||||||| ||||||||||| ||
Sbjct: 23462344 atgtttctcgactatgttgtacaagcaagagacacatcgctctgatagttgatcaagact 23462403

                            
Query: 403      ctctccaccacc 414
                 |||||||||||
Sbjct: 23462404 ttctccaccacc 23462415



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 169/213 (79%), Gaps = 3/213 (1%)
 Strand = Plus / Plus

                                                                            
Query: 131      tcgcccccaaacgcattctccagaacaccggtggcctcaaggtggctaacatctccacac 190
                ||||| ||||| || || ||||||||||||||  ||| ||||||||| |  || || |||
Sbjct: 23461814 tcgccaccaaaggcgttttccagaacaccggtttccttaaggtggctgatgtccccgcac 23461873

                                                                            
Query: 191      atcttgacaatgcagcggccagtgtcaccagaaacgagcacgacagtaaccgacgtgttg 250
                  |||||||||||| || |||||| ||||||| || || |  ||  | || || ||||||
Sbjct: 23461874 gccttgacaatgcaacgcccagtggcaccagacacaaggattacgcttacggatgtgttg 23461933

                                                                            
Query: 251      tgtattttgccgcgaagcggc---atgggactggcgtgcctgtagagctctctgatggtt 307
                ||||| || ||| |||| |||   || |||||||| ||||||||||| ||||||||||||
Sbjct: 23461934 tgtatcttaccgtgaagaggcttcattggactggcatgcctgtagagttctctgatggtt 23461993

                                                 
Query: 308      cctccatgagataccaggataactcgctcccct 340
                || || || || |||| ||| | ||||||||||
Sbjct: 23461994 ccaccgtgcgagaccaagattattcgctcccct 23462026



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>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_E05
          Length = 126978

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                         
Query: 343   atgttcctcgactattttatacaggcatgagacacatcgctctgacagttgatcaaggct 402
             ||||| ||||||||| || |||| ||| ||||||||||||||||| ||||||||||| ||
Sbjct: 53759 atgtttctcgactatgttgtacaagcaagagacacatcgctctgatagttgatcaagact 53818

                         
Query: 403   ctctccaccacc 414
              |||||||||||
Sbjct: 53819 ttctccaccacc 53830



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 169/213 (79%), Gaps = 3/213 (1%)
 Strand = Plus / Plus

                                                                         
Query: 131   tcgcccccaaacgcattctccagaacaccggtggcctcaaggtggctaacatctccacac 190
             ||||| ||||| || || ||||||||||||||  ||| ||||||||| |  || || |||
Sbjct: 53229 tcgccaccaaaggcgttttccagaacaccggtttccttaaggtggctgatgtccccgcac 53288

                                                                         
Query: 191   atcttgacaatgcagcggccagtgtcaccagaaacgagcacgacagtaaccgacgtgttg 250
               |||||||||||| || |||||| ||||||| || || |  ||  | || || ||||||
Sbjct: 53289 gccttgacaatgcaacgcccagtggcaccagacacaaggattacgcttacggatgtgttg 53348

                                                                         
Query: 251   tgtattttgccgcgaagcggc---atgggactggcgtgcctgtagagctctctgatggtt 307
             ||||| || ||| |||| |||   || |||||||| ||||||||||| ||||||||||||
Sbjct: 53349 tgtatcttaccgtgaagaggcttcattggactggcatgcctgtagagttctctgatggtt 53408

                                              
Query: 308   cctccatgagataccaggataactcgctcccct 340
             || || || || |||| ||| | ||||||||||
Sbjct: 53409 ccaccgtgcgagaccaagattattcgctcccct 53441



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>ref|XM_606837.2| PREDICTED: Bos taurus similar to OG2 homeobox (LOC528414), mRNA
          Length = 2505

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 95   ctgctgcaggtggggtgctct 115
            |||||||||||||||||||||
Sbjct: 2404 ctgctgcaggtggggtgctct 2384



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>emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 on chromosome 11p13, complete
             sequence
          Length = 111590

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 362   tacaggcatgagacacatcgc 382
             |||||||||||||||||||||
Sbjct: 24733 tacaggcatgagacacatcgc 24753



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>gb|BC107341.1| Mus musculus developmental pluripotency-associated 3, mRNA (cDNA
           clone MGC:130309 IMAGE:40055220), complete cds
          Length = 636

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 50  tctctgatggttcctccatg 31



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>gb|BC107340.1| Mus musculus developmental pluripotency-associated 3, mRNA (cDNA
           clone MGC:130308 IMAGE:40055218), complete cds
          Length = 636

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 50  tctctgatggttcctccatg 31



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>ref|XM_878101.1| PREDICTED: Bos taurus CTSZ protein, transcript variant 2 (CTSZ),
           mRNA
          Length = 1075

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gccagtgtcaccagaaacgagcac 231
           |||||||||||||||||| |||||
Sbjct: 321 gccagtgtcaccagaaaccagcac 344



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>ref|XM_592880.2| PREDICTED: Bos taurus CTSZ protein, transcript variant 1 (CTSZ),
           mRNA
          Length = 1441

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 gccagtgtcaccagaaacgagcac 231
           |||||||||||||||||| |||||
Sbjct: 321 gccagtgtcaccagaaaccagcac 344



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>ref|NM_139218.1| Mus musculus developmental pluripotency-associated 3 (Dppa3), mRNA
          Length = 818

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 118 tctctgatggttcctccatg 99



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>ref|XM_001006400.1| PREDICTED: Mus musculus similar to developmental
           pluripotency-associated 3 (LOC673824), mRNA
          Length = 825

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 121 tctctgatggttcctccatg 102



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>ref|XM_885629.2| PREDICTED: Mus musculus similar to developmental
           pluripotency-associated 3 (LOC621903), mRNA
          Length = 824

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 120 tctctgatggttcctccatg 101



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>ref|XM_909724.2| PREDICTED: Mus musculus similar to developmental
           pluripotency-associated 3 (LOC634364), mRNA
          Length = 824

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 120 tctctgatggttcctccatg 101



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>gb|AC131715.3| Mus musculus BAC clone RP23-180N22 from chromosome 6, complete sequence
          Length = 180102

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    tctctgatggttcctccatg 315
              ||||||||||||||||||||
Sbjct: 125173 tctctgatggttcctccatg 125192



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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    gtcaccagaaacgagcacga 233
              ||||||||||||||||||||
Sbjct: 104830 gtcaccagaaacgagcacga 104849



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>gb|AC037471.12| Homo sapiens chromosome 15, clone RP11-810K23, complete sequence
          Length = 217553

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    ttttatacaggcatgagaca 376
              ||||||||||||||||||||
Sbjct: 200124 ttttatacaggcatgagaca 200105



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>gb|AC127381.4| Homo sapiens BAC clone RP11-1360M22 from UL, complete sequence
          Length = 241627

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   ttttatacaggcatgagaca 376
             ||||||||||||||||||||
Sbjct: 25695 ttttatacaggcatgagaca 25714



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>gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, complete sequence
          Length = 155343

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   ttttatacaggcatgagaca 376
             ||||||||||||||||||||
Sbjct: 43462 ttttatacaggcatgagaca 43443



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>gb|AY134859.1| Mus musculus compaction-associated protein 1 (Crg1) mRNA, complete
           cds
          Length = 808

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 130 tctctgatggttcctccatg 111



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>gb|BC100331.1| Mus musculus developmental pluripotency-associated 3, mRNA (cDNA
           clone MGC:117618 IMAGE:30934920), complete cds
          Length = 913

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 93  tctctgatggttcctccatg 74



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>gb|AC021585.7| Homo sapiens chromosome , clone RP11-96F3, complete sequence
          Length = 187670

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   ttttatacaggcatgagaca 376
             ||||||||||||||||||||
Sbjct: 21985 ttttatacaggcatgagaca 22004



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>gb|BC099433.1| Mus musculus developmental pluripotency-associated 3, mRNA (cDNA
           clone MGC:117617 IMAGE:30933569), complete cds
          Length = 849

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 96  tctctgatggttcctccatg 77



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>gb|AY082485.1| Mus musculus stella mRNA, complete cds
          Length = 818

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 118 tctctgatggttcctccatg 99



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>emb|CR594233.1| full-length cDNA clone CS0DI067YI21 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 956

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 gcaggtggggtgctcttagg 119
           ||||||||||||||||||||
Sbjct: 269 gcaggtggggtgctcttagg 288



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>gb|AF334830.1| Homo sapiens cartilage-hair hypoplasia region gene sequence
          Length = 138754

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   gcaggtggggtgctcttagg 119
             ||||||||||||||||||||
Sbjct: 21843 gcaggtggggtgctcttagg 21824



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>gb|AF490476.1| Homo sapiens histidine triad nucleotide binding protein 2 (HINT2)
            gene, complete cds
          Length = 3778

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  gcaggtggggtgctcttagg 119
            ||||||||||||||||||||
Sbjct: 2294 gcaggtggggtgctcttagg 2313



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>dbj|AK136263.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420498L12 product:developmental
           pluripotency-associated 3, full insert sequence
          Length = 795

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 123 tctctgatggttcctccatg 104



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>dbj|AK135769.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420413P20 product:developmental
           pluripotency-associated 3, full insert sequence
          Length = 776

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 123 tctctgatggttcctccatg 104



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>gb|AC126335.16| Homo sapiens chromosome 15, clone RP11-854K16, complete sequence
          Length = 178738

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   ttttatacaggcatgagaca 376
             ||||||||||||||||||||
Sbjct: 32005 ttttatacaggcatgagaca 31986



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>gb|AF490347.1| Mus musculus DPPA3 mRNA, complete cds
          Length = 823

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 tctctgatggttcctccatg 315
           ||||||||||||||||||||
Sbjct: 123 tctctgatggttcctccatg 104



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>gb|AC158651.12| Mus musculus  BAC RP24-68I7 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 190089

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    tctctgatggttcctccatg 315
              ||||||||||||||||||||
Sbjct: 135249 tctctgatggttcctccatg 135230



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>gb|BC033538.1| Homo sapiens, clone IMAGE:5163796, mRNA
          Length = 2171

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  gcaggtggggtgctcttagg 119
            ||||||||||||||||||||
Sbjct: 1706 gcaggtggggtgctcttagg 1725



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>gb|AC127533.9| Homo sapiens chromosome 15, clone RP11-1363O20, complete sequence
          Length = 165791

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   ttttatacaggcatgagaca 376
             ||||||||||||||||||||
Sbjct: 36425 ttttatacaggcatgagaca 36444



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>gb|AC134676.5| Homo sapiens chromosome 15, clone CTD-2290E14, complete sequence
          Length = 93881

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   ttttatacaggcatgagaca 376
             ||||||||||||||||||||
Sbjct: 90041 ttttatacaggcatgagaca 90060



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>emb|AL133410.32| Human DNA sequence from clone RP11-112J3 on chromosome 9p13.1-13.3
              Contains the 3' end of the CA9 gene for carbonic anhydrase
              IX (MN), the TPM2 gene for tropomyosin 2 (beta) (DA1, TMSB,
              AMCD1), the TLN1 gene for talin 1 (TLN, KIAA1027), the
              CREB3 gene for cAMP responsive element binding protein 3
              (luman) (LZIP, LUMAN, MGC15333, MGC19782), the GBA2 gene
              for glucosidase, beta (bile acid) 2 (AD035, KIAA1605,
              MGC16895, DKFZp762K054), a novel gene (KIAA0258), five
              novel genes, the NPR2 gene for natriuretic peptide receptor
              B/guanylate cyclase B (atrionatriuretic peptide receptor B)
              (NPRB, ANPRB, GUC2B, NPRBi), the SPAG8 gene for sperm
              associated antigen 8 (SMP1, BS-84, HSD-1, hSMP-1,
              MGC26201), the HINT2 gene for Histidine triad nucleotide
              binding protein 2, the gene for NAG-5 protein (LOC51754),
              an olfactory receptor pseudogene, the gene for a novel
              seven transmembrane helix receptor, a NADH dehydrogenase
              (ubiquinone) 1 alpha subcomplex, 5,13kDa (B13, NUFM,
              UQOR13, FLJ12147, CI-13KD-B) (NDUFA5) pseudogene and six
              CpG islands, complete sequence
          Length = 195379

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    gcaggtggggtgctcttagg 119
              ||||||||||||||||||||
Sbjct: 133528 gcaggtggggtgctcttagg 133509



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>emb|AL808133.17| Mouse DNA sequence from clone RP23-457N24 on chromosome X, complete
              sequence
          Length = 170192

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    tctctgatggttcctccatg 315
              ||||||||||||||||||||
Sbjct: 105879 tctctgatggttcctccatg 105898


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,530,550
Number of Sequences: 3902068
Number of extensions: 3530550
Number of successful extensions: 61486
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61416
Number of HSP's gapped (non-prelim): 66
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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