ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart45e07 |
|---|---|
| Clone Library Name | barley_pub |
>RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein)| (Fertility restorer) (Restorer for CMS) Length = 791 Score = 37.0 bits (84), Expect = 0.012 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = -2 Query: 287 NTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYAL 111 NT F NS++ + K +++ E++F M + +P+ ITY+ L+ Y G D+ L Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533 Score = 34.3 bits (77), Expect = 0.076 Identities = 18/73 (24%), Positives = 37/73 (50%) Frame = -2 Query: 371 LINGFSNAALFRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQ 192 LING+ A + + ++ + + PNT +++++ K + +F+ M+ Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576 Query: 191 CEPDAITYSILLE 153 PD ITY+I+L+ Sbjct: 577 VSPDIITYNIILQ 589 Score = 34.3 bits (77), Expect = 0.076 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = -2 Query: 323 MVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYR 144 + +L R+ V PN +N+++ A + + ++ M + +P+ +TYS L+ Y Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557 Query: 143 K-EGMTDKMYALQQENPSLVSTELV 72 K M D + ++ S VS +++ Sbjct: 558 KISRMEDALVLFKEMESSGVSPDII 582 Score = 34.3 bits (77), Expect = 0.076 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Frame = -2 Query: 371 LINGFSNAALFRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQ 192 L+ G++ ++ G++ L R + P+ + ++ A AK + Q VF M+ Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401 Query: 191 CEPDAITYSILLEAYRKEG-MTDKMYALQQ 105 P+A+TY ++ K G + D M +Q Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431 Score = 33.1 bits (74), Expect = 0.17 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 8/88 (9%) Frame = -2 Query: 308 ERLD--VPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYRKEG 135 E LD + P+ +NS++AA KA+ + + V M PD +TY+ +L Y G Sbjct: 221 EMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 280 Query: 134 MTDKMYALQQE------NPSLVSTELVM 69 + ++ P +V+ L+M Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLM 308 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/79 (22%), Positives = 34/79 (43%) Frame = -2 Query: 371 LINGFSNAALFRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQ 192 +I A K + ++ + V P+ +NS+L + + + M+ Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296 Query: 191 CEPDAITYSILLEAYRKEG 135 EPD +TYS+L++ K G Sbjct: 297 VEPDVVTYSLLMDYLCKNG 315 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = -2 Query: 290 PNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDK 123 P + + ++L A L++M + M PD +SIL+ AY K+G D+ Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQ 389 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/66 (21%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = -2 Query: 290 PNTSFHNSVLAACA---KAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKM 120 PN +N +L ++++ +++ + + PD ++Y+ ++ + KEG +DK Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215 Query: 119 YALQQE 102 Y+ E Sbjct: 216 YSTYHE 221 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/82 (20%), Positives = 34/82 (41%) Frame = -2 Query: 371 LINGFSNAALFRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQ 192 LING+ + + + K E V P+ +N +L + + ++ + Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611 Query: 191 CEPDAITYSILLEAYRKEGMTD 126 + + TY+I+L K +TD Sbjct: 612 TQIELSTYNIILHGLCKNKLTD 633 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/77 (24%), Positives = 33/77 (42%) Frame = -2 Query: 341 FRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSI 162 F + ++K R+D +F + CA M+ V R M + C P+ +Y+I Sbjct: 107 FAALGNVIKKGFRVDA---IAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNI 163 Query: 161 LLEAYRKEGMTDKMYAL 111 LL+ E + + L Sbjct: 164 LLKGLCDENRSQEALEL 180
>AEP3_CANGA (Q6FKT1) ATPase expression protein 3| Length = 623 Score = 30.8 bits (68), Expect = 0.84 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = -2 Query: 275 HNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYALQQE 102 +N +L +K D +F MK C+P+ TY+ILL K+ K+ +++ E Sbjct: 221 YNDILYFYSKKYDFATCRELFAQMKVEGCKPNTTTYNILLLNLVKKVHMRKIRSIKNE 278
>Y4791_ARATH (P0C043) Hypothetical PPR-repeat protein At4g17915| Length = 463 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = -2 Query: 305 RLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTD 126 RL V P+ +N++++ + + + V R M+ PD TY+ L+ + M D Sbjct: 41 RLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLD 100 Query: 125 KMYALQQE 102 + L E Sbjct: 101 HVLYLFDE 108 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/90 (23%), Positives = 35/90 (38%) Frame = -2 Query: 371 LINGFSNAALFRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQ 192 LING + M+ ++ PN + ++L K + + ++F MK Sbjct: 194 LINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREG 253 Query: 191 CEPDAITYSILLEAYRKEGMTDKMYALQQE 102 D Y ++ A K G T + Y QE Sbjct: 254 YTYDGYAYFAVVSALIKTGRTKEAYEYMQE 283 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/85 (21%), Positives = 38/85 (44%) Frame = -2 Query: 371 LINGFSNAALFRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQ 192 LI+G+ + + + + P+ + +NS++A A+ L + +F M Sbjct: 54 LISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWG 113 Query: 191 CEPDAITYSILLEAYRKEGMTDKMY 117 PD +Y+ L+ Y K G ++ + Sbjct: 114 IYPDLWSYNTLMCCYFKLGKHEEAF 138
>CD2L6_MOUSE (Q8BWD8) Cell division cycle 2-like protein kinase 6 (EC 2.7.11.22)| (CDC2-related protein kinase 6) Length = 501 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/48 (35%), Positives = 27/48 (56%) Frame = -2 Query: 248 KAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYALQQ 105 KA+ + ERV ++ C+ TY + +A RK+G +K YAL+Q Sbjct: 6 KAKLAAERERVEDLFEYEGCKVGRGTYGHVYKARRKDGKDEKEYALKQ 53
>CD2L6_HUMAN (Q9BWU1) Cell division cycle 2-like protein kinase 6 (EC 2.7.11.22)| (CDC2-related protein kinase 6) (Death-preventing kinase) (Cyclin-dependent kinase 11) Length = 502 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/48 (35%), Positives = 27/48 (56%) Frame = -2 Query: 248 KAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYALQQ 105 KA+ + ERV ++ C+ TY + +A RK+G +K YAL+Q Sbjct: 6 KAKLAAERERVEDLFEYEGCKVGRGTYGHVYKARRKDGKDEKEYALKQ 53
>CDK8_HUMAN (P49336) Cell division protein kinase 8 (EC 2.7.11.22) (EC| 2.7.11.23) (Protein kinase K35) Length = 464 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = -2 Query: 230 QMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYALQQ 105 + ERV ++ C+ TY + +A RK+G DK YAL+Q Sbjct: 12 ERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQ 53
>ACCA_COXBU (Q83BJ8) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 316 Score = 29.3 bits (64), Expect = 2.4 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 4/99 (4%) Frame = -2 Query: 362 GFSNAALFRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEP 183 G + FRK + ++KLAER +P T AE+ Q E + R++ M Sbjct: 130 GMARPEGFRKALRLMKLAERFSIPVITLIDTPGAYPGIGAEERNQSEAIARNLFEMAQLK 189 Query: 182 DAITYSILLEAYR----KEGMTDKMYALQQENPSLVSTE 78 I +I+ E G+ D+ LQ S++S E Sbjct: 190 IPIICTIIGEGCSGGALAIGVGDRTLMLQYAYYSVISPE 228
>ACCA_PASMU (Q9CNX9) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 317 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%) Frame = -2 Query: 341 FRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSI 162 +RK + ++++AER ++P T AE+ Q E + R+++ M + ++ Sbjct: 138 YRKALRLMQMAERFNLPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSTLKVPVICTV 197 Query: 161 LLE----AYRKEGMTDKMYALQQENPSLVSTE 78 + E G+ DK+ LQ S++S E Sbjct: 198 IGEGGSGGALAIGVGDKVNMLQYSTYSVISPE 229
>ZN267_HUMAN (Q14586) Zinc finger protein 267 (Zinc finger protein HZF2)| Length = 743 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/71 (23%), Positives = 34/71 (47%) Frame = -2 Query: 278 FHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYALQQEN 99 FH +L++CAK+ + Q +VF H + + + ++ + K + DK L ++ Sbjct: 148 FHQQILSSCAKSYNFDQYRKVFTHSSLLNQQEE-------IDIWGKHHIYDKTSVLFRQV 200 Query: 98 PSLVSTELVMV 66 +L S V + Sbjct: 201 STLNSYRNVFI 211
>AAEB_ERWCT (Q6DAH4) p-hydroxybenzoic acid efflux pump subunit aaeB (pHBA| efflux pump protein B) Length = 662 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Frame = +1 Query: 199 CFMCLKTLSICIRSSAFAHAARTEL*KDVFGGTSSLSASFT------MPTTLRKRAALLN 360 CF+ L + + IR + AH RT L + V+G S+L+ + +P ++ LLN Sbjct: 501 CFLALMVIML-IRDNTKAHTGRTLLNRFVYGAVSALTTNRARRKENHLPALYQQLFLLLN 559 Query: 361 PF 366 F Sbjct: 560 RF 561
>GPR56_PANTR (Q50DM7) G-protein coupled receptor 56 precursor| Length = 687 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = -2 Query: 293 PPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEA 150 PP+T+ HN+ + C DL + + +H + P A S L++ Sbjct: 164 PPHTAAHNASVDMCELKRDLQLLSQFLKHPQKASRRPSAAPASQQLQS 211
>GPR56_MACMU (Q50DM8) G-protein coupled receptor 56 precursor| Length = 687 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = -2 Query: 293 PPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEA 150 PP+T+ HN+ + C DL + + +H + P A S L++ Sbjct: 164 PPHTAAHNASVDMCELKRDLQLLSQFLKHPQKASRRPSATPASQQLQS 211
>PT309_YEAST (P32522) Protein PET309, mitochondrial precursor| Length = 965 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%) Frame = -2 Query: 206 MKHMQCEPDAITYSILLEAYRKEGMTD---KMYALQQEN 99 +KH + DA + I++EAY KEG D +Y +N Sbjct: 588 IKHSVIKVDATHFEIIMEAYDKEGYRDGIINLYKTMSQN 626
>GPR56_HUMAN (Q9Y653) G-protein coupled receptor 56 precursor (TM7XN1 protein)| Length = 693 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = -2 Query: 293 PPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEA 150 PP+T+ HN+ + C DL + + +H + P A S L++ Sbjct: 164 PPHTAAHNASVDMCELKRDLQLLSQFLKHPQKASRRPSAAPASQQLQS 211
>ACCA_SALTY (P0A1C3) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 318 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%) Frame = -2 Query: 341 FRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSI 162 +RK + ++++AER ++P T AE+ Q E + R+++ M + ++ Sbjct: 139 YRKALRLMEMAERFNMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLNVPVICTV 198 Query: 161 LLE----AYRKEGMTDKMYALQQENPSLVSTE 78 + E G+ DK+ LQ S++S E Sbjct: 199 IGEGGSGGALAIGVGDKVNMLQYSTYSVISPE 230
>ACCA_SALTI (P0A1C4) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 318 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%) Frame = -2 Query: 341 FRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSI 162 +RK + ++++AER ++P T AE+ Q E + R+++ M + ++ Sbjct: 139 YRKALRLMEMAERFNMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLNVPVICTV 198 Query: 161 LLE----AYRKEGMTDKMYALQQENPSLVSTE 78 + E G+ DK+ LQ S++S E Sbjct: 199 IGEGGSGGALAIGVGDKVNMLQYSTYSVISPE 230
>ACCA_FUSNN (Q8RG99) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 313 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 4/99 (4%) Frame = -2 Query: 362 GFSNAALFRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEP 183 G +N +RK + + ++AER +P T +AE Q E + R++ M Sbjct: 125 GMANPEGYRKALRLYEMAERFKLPILTFIDTPGAYPGLEAEKHGQGEAIARNLMEMSGIK 184 Query: 182 DAITYSILLEAYRKE----GMTDKMYALQQENPSLVSTE 78 I ++ E G+ DK++ L+ S++S E Sbjct: 185 TPIVSIVIGEGGSGGALGLGVADKVFMLENSVYSVISPE 223
>ACCA_FRATT (Q5NEV9) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 315 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Frame = -2 Query: 341 FRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSI 162 +RK + ++KLAE+ ++P T KAE+ Q E + R++ M + + Sbjct: 133 YRKALRLMKLAEKFNMPVVTFIDTPGAYPGIKAEERGQSEAIARNLLEMSALKVPVVCIV 192 Query: 161 LLEAYRKE----GMTDKMYALQQENPSLVSTE 78 + E G+ D++ LQ + +S E Sbjct: 193 IGEGCSGGALGIGVGDRLLMLQYSYFATISPE 224
>ACCA_SALPA (Q5PD69) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 319 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%) Frame = -2 Query: 341 FRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSI 162 +RK + ++++AER ++P T AE+ Q E + R+++ M + ++ Sbjct: 140 YRKALRLMEMAERFNMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLNVPVICTV 199 Query: 161 LLE----AYRKEGMTDKMYALQQENPSLVSTE 78 + E G+ DK+ LQ S++S E Sbjct: 200 IGEGGSGGALAIGVGDKVNMLQYSTYSVISPE 231
>ACCA_SALCH (Q57T23) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 319 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%) Frame = -2 Query: 341 FRKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSI 162 +RK + ++++AER ++P T AE+ Q E + R+++ M + ++ Sbjct: 140 YRKALRLMEMAERFNMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLNVPVICTV 199 Query: 161 LLE----AYRKEGMTDKMYALQQENPSLVSTE 78 + E G+ DK+ LQ S++S E Sbjct: 200 IGEGGSGGALAIGVGDKVNMLQYSTYSVISPE 231
>ZAN_HUMAN (Q9Y493) Zonadhesin precursor| Length = 2812 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Frame = -3 Query: 226 WRGSSGT*NICSV-----NQMPSHTPSCWKLIGRKE 134 WR SS C N +PS +PSCW L GR E Sbjct: 2201 WRNSSFCPLECPAYSSYTNCLPSCSPSCWDLDGRCE 2236
>GPR56_GORGO (Q50DM6) G-protein coupled receptor 56 precursor| Length = 687 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/39 (28%), Positives = 19/39 (48%) Frame = -2 Query: 293 PPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDA 177 PP+T+ HN+ + C DL + + +H + P A Sbjct: 164 PPHTAAHNASVDMCELKRDLQLLSQFLKHPQKASRRPSA 202
>ZSCA5_HUMAN (Q9BUG6) Zinc finger and SCAN domain-containing protein 5 (Zinc| finger protein 495) Length = 496 Score = 27.7 bits (60), Expect = 7.1 Identities = 21/71 (29%), Positives = 30/71 (42%) Frame = -2 Query: 299 DVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKM 120 DV P S N + +C K D +Q R + H+ PD T +L+ E M Sbjct: 37 DVDPEISHVNFRMFSCPKESDPIQALRKLTELCHLWLRPDLHTKEQILDMLVMEQF---M 93 Query: 119 YALQQENPSLV 87 ++ QE LV Sbjct: 94 ISMPQELQVLV 104
>LSHB_TRIVU (O46482) Lutropin beta chain precursor (Luteinizing hormone beta| subunit) (LSH-beta) (LSH-B) (LH-B) Length = 141 Score = 27.7 bits (60), Expect = 7.1 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -1 Query: 267 CSCGMCESRGSDANGEGLQAHETYAV*TRCHHILHLV 157 CSCG C SD G + H + TR H LHL+ Sbjct: 109 CSCGSCRLSHSDCGGPRARPH----LCTRPHLSLHLL 141
>NFKB2_MOUSE (Q9WTK5) Nuclear factor NF-kappa-B p100 subunit (DNA-binding factor| KBF2) [Contains: Nuclear factor NF-kappa-B p52 subunit] Length = 899 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +2 Query: 239 PLLSHMPQEQSCEKMCLAVHRASQQALPCLPPCG 340 P + HMP + + LAVH S + L L CG Sbjct: 590 PQILHMPDFEGLYPVHLAVHARSPECLDLLVDCG 623
>UL48_HCMVA (P16785) Probable large tegument protein| Length = 2241 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = -2 Query: 308 ERLDVPPNTSFHNSVLAACAKAEDLMQMERV 216 +RL T HN +L EDL QMERV Sbjct: 624 DRLSTQLLTRVHNHILNGFLPVEDLKQMERV 654
>CTBL1_HUMAN (Q8WYA6) Beta-catenin-like protein 1 (Nuclear-associated protein)| (NAP) (Protein NYD-SP19) Length = 563 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -1 Query: 327 RHGKAC*EARCTAKHIFSQLCSCGMCES-RGSDANGEGLQ 211 RH + E + +++F LCSC M S R GEGLQ Sbjct: 298 RHNPSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQ 337
>SPR2_CAEEL (Q18240) Suppressor of presenilin 2| Length = 312 Score = 27.3 bits (59), Expect = 9.2 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 4/85 (4%) Frame = -2 Query: 317 KLAERLDVPPNTSFHNSVLAACAKAEDLMQMERVFRHMKHMQCEPDAITYSILLEAYRKE 138 KL ++D T+F N L + A E+ + R ++ + E + I++ E Sbjct: 72 KLTTKIDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNE 131 Query: 137 GMTD----KMYALQQENPSLVSTEL 75 T+ K Y LQ E+PS TE+ Sbjct: 132 YFTNEVITKSYHLQSESPSTEITEI 156 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,633,162 Number of Sequences: 219361 Number of extensions: 1283131 Number of successful extensions: 3150 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3078 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3150 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
