Clone Name | rbart45e07 |
---|---|
Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 143 bits (72), Expect = 5e-31 Identities = 246/304 (80%) Strand = Plus / Minus Query: 72 gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131 |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || || Sbjct: 11023693 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 11023634 Query: 132 cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191 |||||||||||||||||||||| ||| ||| ||||||||||| | |||||||| ||| Sbjct: 11023633 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 11023574 Query: 192 ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251 ||| || || |||||| || |||||||||||||||| | ||||| |||||| ||||| | Sbjct: 11023573 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 11023514 Query: 252 acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311 ||||| | ||||||| ||||| |||| ||| | || ||| | ||||||||||| Sbjct: 11023513 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 11023454 Query: 312 aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371 ||||| |||||||| |||||||| ||||||| | || |||| |||||| |||||||| Sbjct: 11023453 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 11023394 Query: 372 acaa 375 |||| Sbjct: 11023393 acaa 11023390
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 143 bits (72), Expect = 5e-31 Identities = 246/304 (80%) Strand = Plus / Plus Query: 72 gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131 |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || || Sbjct: 109429 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 109488 Query: 132 cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191 |||||||||||||||||||||| ||| ||| ||||||||||| | |||||||| ||| Sbjct: 109489 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 109548 Query: 192 ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251 ||| || || |||||| || |||||||||||||||| | ||||| |||||| ||||| | Sbjct: 109549 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 109608 Query: 252 acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311 ||||| | ||||||| ||||| |||| ||| | || ||| | ||||||||||| Sbjct: 109609 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 109668 Query: 312 aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371 ||||| |||||||| |||||||| ||||||| | || |||| |||||| |||||||| Sbjct: 109669 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 109728 Query: 372 acaa 375 |||| Sbjct: 109729 acaa 109732
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 143 bits (72), Expect = 5e-31 Identities = 246/304 (80%) Strand = Plus / Minus Query: 72 gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131 |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || || Sbjct: 11020456 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 11020397 Query: 132 cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191 |||||||||||||||||||||| ||| ||| ||||||||||| | |||||||| ||| Sbjct: 11020396 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 11020337 Query: 192 ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251 ||| || || |||||| || |||||||||||||||| | ||||| |||||| ||||| | Sbjct: 11020336 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 11020277 Query: 252 acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311 ||||| | ||||||| ||||| |||| ||| | || ||| | ||||||||||| Sbjct: 11020276 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 11020217 Query: 312 aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371 ||||| |||||||| |||||||| ||||||| | || |||| |||||| |||||||| Sbjct: 11020216 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 11020157 Query: 372 acaa 375 |||| Sbjct: 11020156 acaa 11020153
>dbj|AK111624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108I11, full insert sequence Length = 3398 Score = 143 bits (72), Expect = 5e-31 Identities = 246/304 (80%) Strand = Plus / Minus Query: 72 gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131 |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || || Sbjct: 1532 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 1473 Query: 132 cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191 |||||||||||||||||||||| ||| ||| ||||||||||| | |||||||| ||| Sbjct: 1472 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 1413 Query: 192 ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251 ||| || || |||||| || |||||||||||||||| | ||||| |||||| ||||| | Sbjct: 1412 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 1353 Query: 252 acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311 ||||| | ||||||| ||||| |||| ||| | || ||| | ||||||||||| Sbjct: 1352 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 1293 Query: 312 aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371 ||||| |||||||| |||||||| ||||||| | || |||| |||||| |||||||| Sbjct: 1292 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 1233 Query: 372 acaa 375 |||| Sbjct: 1232 acaa 1229
>dbj|AK111530.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013024C10, full insert sequence Length = 2335 Score = 143 bits (72), Expect = 5e-31 Identities = 246/304 (80%) Strand = Plus / Minus Query: 72 gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131 |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || || Sbjct: 1528 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 1469 Query: 132 cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191 |||||||||||||||||||||| ||| ||| ||||||||||| | |||||||| ||| Sbjct: 1468 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 1409 Query: 192 ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251 ||| || || |||||| || |||||||||||||||| | ||||| |||||| ||||| | Sbjct: 1408 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 1349 Query: 252 acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311 ||||| | ||||||| ||||| |||| ||| | || ||| | ||||||||||| Sbjct: 1348 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 1289 Query: 312 aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371 ||||| |||||||| |||||||| ||||||| | || |||| |||||| |||||||| Sbjct: 1288 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 1229 Query: 372 acaa 375 |||| Sbjct: 1228 acaa 1225
>dbj|AK106141.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G09, full insert sequence Length = 1786 Score = 143 bits (72), Expect = 5e-31 Identities = 246/304 (80%) Strand = Plus / Minus Query: 72 gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131 |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || || Sbjct: 1551 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 1492 Query: 132 cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191 |||||||||||||||||||||| ||| ||| ||||||||||| | |||||||| ||| Sbjct: 1491 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 1432 Query: 192 ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251 ||| || || |||||| || |||||||||||||||| | ||||| |||||| ||||| | Sbjct: 1431 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 1372 Query: 252 acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311 ||||| | ||||||| ||||| |||| ||| | || ||| | ||||||||||| Sbjct: 1371 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 1312 Query: 312 aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371 ||||| |||||||| |||||||| ||||||| | || |||| |||||| |||||||| Sbjct: 1311 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 1252 Query: 372 acaa 375 |||| Sbjct: 1251 acaa 1248
>dbj|AK098942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043D15, full insert sequence Length = 1730 Score = 143 bits (72), Expect = 5e-31 Identities = 246/304 (80%) Strand = Plus / Minus Query: 72 gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131 |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || || Sbjct: 1531 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 1472 Query: 132 cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191 |||||||||||||||||||||| ||| ||| ||||||||||| | |||||||| ||| Sbjct: 1471 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 1412 Query: 192 ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251 ||| || || |||||| || |||||||||||||||| | ||||| |||||| ||||| | Sbjct: 1411 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 1352 Query: 252 acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311 ||||| | ||||||| ||||| |||| ||| | || ||| | ||||||||||| Sbjct: 1351 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 1292 Query: 312 aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371 ||||| |||||||| |||||||| ||||||| | || |||| |||||| |||||||| Sbjct: 1291 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 1232 Query: 372 acaa 375 |||| Sbjct: 1231 acaa 1228
>dbj|AK060922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H05, full insert sequence Length = 1786 Score = 143 bits (72), Expect = 5e-31 Identities = 246/304 (80%) Strand = Plus / Minus Query: 72 gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131 |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || || Sbjct: 1551 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 1492 Query: 132 cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191 |||||||||||||||||||||| ||| ||| ||||||||||| | |||||||| ||| Sbjct: 1491 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 1432 Query: 192 ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251 ||| || || |||||| || |||||||||||||||| | ||||| |||||| ||||| | Sbjct: 1431 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 1372 Query: 252 acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311 ||||| | ||||||| ||||| |||| ||| | || ||| | ||||||||||| Sbjct: 1371 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 1312 Query: 312 aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371 ||||| |||||||| |||||||| ||||||| | || |||| |||||| |||||||| Sbjct: 1311 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 1252 Query: 372 acaa 375 |||| Sbjct: 1251 acaa 1248
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 143 bits (72), Expect = 5e-31 Identities = 246/304 (80%) Strand = Plus / Minus Query: 72 gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131 |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || || Sbjct: 67178 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 67119 Query: 132 cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191 |||||||||||||||||||||| ||| ||| ||||||||||| | |||||||| ||| Sbjct: 67118 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 67059 Query: 192 ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251 ||| || || |||||| || |||||||||||||||| | ||||| |||||| ||||| | Sbjct: 67058 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 66999 Query: 252 acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311 ||||| | ||||||| ||||| |||| ||| | || ||| | ||||||||||| Sbjct: 66998 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 66939 Query: 312 aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371 ||||| |||||||| |||||||| ||||||| | || |||| |||||| |||||||| Sbjct: 66938 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 66879 Query: 372 acaa 375 |||| Sbjct: 66878 acaa 66875
>gb|AY278988.1| Zea mays PPR2 (ppr2) gene, complete cds; nuclear gene for chloroplast product Length = 2781 Score = 93.7 bits (47), Expect = 4e-16 Identities = 191/239 (79%) Strand = Plus / Minus Query: 97 gggttctcctgttgcagagcgtacatcttatcggtcattccttccttccgataagcttcc 156 ||||||||||| |||||||| || ||||| ||||||||||| ||||| |||||||| ||| Sbjct: 2452 gggttctcctgatgcagagcatagatcttgtcggtcattccctccttgcgataagcctcc 2393 Query: 157 aacaagatggagtatgtgatggcatctggttcacactgcatatgtttcatgtgcctgaag 216 | |||||| ||||| || ||||| || || |||||| |||| |||||| ||||||| Sbjct: 2392 accaagatagagtacgtcgaagcatcaggctcgcactgcgtatgcttcatgcgcctgaac 2333 Query: 217 accctctccatttgcatcagatcctctgctttcgcacatgccgcaagaacagagttgtga 276 ||||||||||| | || ||||| || ||| | || || || ||||||||| ||||| Sbjct: 2332 accctctccatctccacgagatcgtccgctctagcgcacgcgccaagaacagcattgtgg 2273 Query: 277 aaagatgtgtttggcggtacatcgagcctctcagcaagctttaccatgcctaccacctt 335 |||| ||||| || || ||||||||||| || ||||| |||||||| |||||||| Sbjct: 2272 aaaggcgtgttcacgggcacgtcgagcctctcggcgagcttcaccatgcccaccacctt 2214
>gb|AC160543.13| Mus musculus chromosome 1, clone RP23-186L22, complete sequence Length = 212353 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 agaggaacagattttttattt 21 ||||||||||||||||||||| Sbjct: 181811 agaggaacagattttttattt 181791
>gb|AY512928.1| Mus musculus clone NIA:B0243C11 unknown mRNA Length = 2833 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agaggaacagattttttattt 21 ||||||||||||||||||||| Sbjct: 2396 agaggaacagattttttattt 2416
>gb|AC137845.9| Mus musculus chromosome 1, clone RP23-430H22, complete sequence Length = 213882 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 agaggaacagattttttattt 21 ||||||||||||||||||||| Sbjct: 39271 agaggaacagattttttattt 39251
>gb|AC154791.3| Mus musculus BAC clone RP24-482P18 from chromosome 16, complete sequence Length = 188918 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 10303 gaaaccaaacttgggttctc 10322
>ref|XM_585910.2| PREDICTED: Bos taurus similar to Anion exchange protein 4 (Anion exchanger 4) (Solute carrier family 4 member 9) (Sodium bicarbonate cotransporter 5), transcript variant 1 (LOC509031), mRNA Length = 3324 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcacatgccgcaagaacaga 269 |||||||||||||||||||| Sbjct: 2557 gcacatgccgcaagaacaga 2538
>ref|XM_879635.1| PREDICTED: Bos taurus similar to Anion exchange protein 4 (Anion exchanger 4) (Solute carrier family 4 member 9) (Sodium bicarbonate cotransporter 5), transcript variant 2 (LOC509031), mRNA Length = 3276 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcacatgccgcaagaacaga 269 |||||||||||||||||||| Sbjct: 2509 gcacatgccgcaagaacaga 2490
>gb|AC116787.10| Mus musculus chromosome 6, clone RP24-296D21, complete sequence Length = 189538 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 112793 gaaaccaaacttgggttctc 112774
>gb|AC122511.5| Mus musculus BAC clone RP24-446A8 from chromosome 6, complete sequence Length = 157847 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 33494 gaaaccaaacttgggttctc 33513
>gb|AC133101.4| Mus musculus BAC clone RP23-154M23 from chromosome 15, complete sequence Length = 206189 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 144368 gaaaccaaacttgggttctc 144349
>gb|AC125202.3| Mus musculus BAC clone RP23-231N20 from chromosome 19, complete sequence Length = 207191 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 39729 gaaaccaaacttgggttctc 39710
>gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosome 12, complete sequence Length = 157435 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 aaccaaacttgggttctcct 106 |||||||||||||||||||| Sbjct: 82890 aaccaaacttgggttctcct 82871
>gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, complete sequence Length = 233499 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 111526 gaaaccaaacttgggttctc 111507
>emb|AL663057.7| Mouse DNA sequence from clone RP23-7J19 on chromosome 11 Contains the Centa2 gene for centaurin alpha 2, a novel gene and the 3' end of a novel gene, complete sequence Length = 70600 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 52295 gaaaccaaacttgggttctc 52276
>emb|AL603702.14| Mouse DNA sequence from clone RP23-406A14 on chromosome 11 Contains a protease (prosome, macropain) 26S subunit ATPase 1 (Psmc1) pseudogene and a CpG island, complete sequence Length = 197265 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aaccaaacttgggttctcct 106 |||||||||||||||||||| Sbjct: 53054 aaccaaacttgggttctcct 53073
>emb|BX537880.1|HSM805986 Homo sapiens genomic DNA; cDNA DKFZp686C03114 (from clone DKFZp686C03114) Length = 5755 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 3218 gaaaccaaacttgggttctc 3199
>gb|AC120797.9| Mus musculus chromosome 18, clone RP24-81D18, complete sequence Length = 210631 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 104784 gaaaccaaacttgggttctc 104765
>gb|AC066616.7| Homo sapiens chromosome 15 clone RP11-925D8 map 15q21.3, complete sequence Length = 209779 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 200927 gaaaccaaacttgggttctc 200946
>gb|AY973541.1|AY973542S2 Hyaloperonospora parasitica isolate Emoy2 clone BAC 12I13, SP6 end Length = 57064 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tgctttcgcacatgccgcaa 262 |||||||||||||||||||| Sbjct: 44602 tgctttcgcacatgccgcaa 44621
>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete sequence Length = 173386 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 51150 gaaaccaaacttgggttctc 51169
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 taccatgcctaccaccttgc 337 |||||||||||||||||||| Sbjct: 939679 taccatgcctaccaccttgc 939660
>emb|BX255891.5| Zebrafish DNA sequence from clone DKEY-263P20 in linkage group 20, complete sequence Length = 104855 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 cagagttgtgaaaagatgtgtttg 289 |||||||||||| ||||||||||| Sbjct: 37038 cagagttgtgaacagatgtgtttg 37015
>emb|CT030236.7| Mouse DNA sequence from clone RP23-445B11 on chromosome 16, complete sequence Length = 166709 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 69101 gaaaccaaacttgggttctc 69082
>gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, complete sequence Length = 189301 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 83360 gaaaccaaacttgggttctc 83379
>gb|AC149588.4| Mus musculus BAC clone RP23-366I10 from 15, complete sequence Length = 200656 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 190017 gaaaccaaacttgggttctc 190036
>emb|AL732572.10| Mouse DNA sequence from clone RP23-32C16 on chromosome 2, complete sequence Length = 213704 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 181635 gaaaccaaacttgggttctc 181616
>emb|AL611950.17| Mouse DNA sequence from clone RP23-45A18 on chromosome 4, complete sequence Length = 161331 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaaaccaaacttgggttctc 104 |||||||||||||||||||| Sbjct: 4262 gaaaccaaacttgggttctc 4243 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,101,404 Number of Sequences: 3902068 Number of extensions: 4101404 Number of successful extensions: 53817 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53723 Number of HSP's gapped (non-prelim): 93 length of query: 375 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 353 effective length of database: 17,147,199,772 effective search space: 6052961519516 effective search space used: 6052961519516 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)