ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart45e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 143 5e-31
2gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, co... 143 5e-31
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 143 5e-31
4dbj|AK111624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 5e-31
5dbj|AK111530.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 5e-31
6dbj|AK106141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 5e-31
7dbj|AK098942.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 5e-31
8dbj|AK060922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 5e-31
9gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare str... 143 5e-31
10gb|AY278988.1| Zea mays PPR2 (ppr2) gene, complete cds; nuclear ... 94 4e-16
11gb|AC160543.13| Mus musculus chromosome 1, clone RP23-186L22, co... 42 1.3
12gb|AY512928.1| Mus musculus clone NIA:B0243C11 unknown mRNA 42 1.3
13gb|AC137845.9| Mus musculus chromosome 1, clone RP23-430H22, com... 42 1.3
14gb|AC154791.3| Mus musculus BAC clone RP24-482P18 from chromosom... 40 5.0
15ref|XM_585910.2| PREDICTED: Bos taurus similar to Anion exchange... 40 5.0
16ref|XM_879635.1| PREDICTED: Bos taurus similar to Anion exchange... 40 5.0
17gb|AC116787.10| Mus musculus chromosome 6, clone RP24-296D21, co... 40 5.0
18gb|AC122511.5| Mus musculus BAC clone RP24-446A8 from chromosome... 40 5.0
19gb|AC133101.4| Mus musculus BAC clone RP23-154M23 from chromosom... 40 5.0
20gb|AC125202.3| Mus musculus BAC clone RP23-231N20 from chromosom... 40 5.0
21gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosom... 40 5.0
22gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, com... 40 5.0
23emb|AL663057.7| Mouse DNA sequence from clone RP23-7J19 on chrom... 40 5.0
24emb|AL603702.14| Mouse DNA sequence from clone RP23-406A14 on ch... 40 5.0
25emb|BX537880.1|HSM805986 Homo sapiens genomic DNA; cDNA DKFZp686... 40 5.0
26gb|AC120797.9| Mus musculus chromosome 18, clone RP24-81D18, com... 40 5.0
27gb|AC066616.7| Homo sapiens chromosome 15 clone RP11-925D8 map 1... 40 5.0
28gb|AY973541.1|AY973542S2 Hyaloperonospora parasitica isolate Emo... 40 5.0
29gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355... 40 5.0
30dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 5.0
31emb|BX255891.5| Zebrafish DNA sequence from clone DKEY-263P20 in... 40 5.0
32emb|CT030236.7| Mouse DNA sequence from clone RP23-445B11 on chr... 40 5.0
33gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, comple... 40 5.0
34gb|AC149588.4| Mus musculus BAC clone RP23-366I10 from 15, compl... 40 5.0
35emb|AL732572.10| Mouse DNA sequence from clone RP23-32C16 on chr... 40 5.0
36emb|AL611950.17| Mouse DNA sequence from clone RP23-45A18 on chr... 40 5.0

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  143 bits (72), Expect = 5e-31
 Identities = 246/304 (80%)
 Strand = Plus / Minus

                                                                            
Query: 72       gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131
                |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || ||
Sbjct: 11023693 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 11023634

                                                                            
Query: 132      cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191
                |||||||||||||||||||||| ||| ||| |||||||||||  | ||||||||   |||
Sbjct: 11023633 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 11023574

                                                                            
Query: 192      ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251
                ||| || || |||||| || |||||||||||||||| | ||||| |||||| |||||  |
Sbjct: 11023573 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 11023514

                                                                            
Query: 252      acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311
                ||||| |   |||||||  ||||| |||| ||| |     || ||| | |||||||||||
Sbjct: 11023513 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 11023454

                                                                            
Query: 312      aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371
                 ||||| |||||||| ||||||||  |||||||  | || |||| |||||| ||||||||
Sbjct: 11023453 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 11023394

                    
Query: 372      acaa 375
                ||||
Sbjct: 11023393 acaa 11023390



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>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence
          Length = 167588

 Score =  143 bits (72), Expect = 5e-31
 Identities = 246/304 (80%)
 Strand = Plus / Plus

                                                                          
Query: 72     gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131
              |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || ||
Sbjct: 109429 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 109488

                                                                          
Query: 132    cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191
              |||||||||||||||||||||| ||| ||| |||||||||||  | ||||||||   |||
Sbjct: 109489 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 109548

                                                                          
Query: 192    ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251
              ||| || || |||||| || |||||||||||||||| | ||||| |||||| |||||  |
Sbjct: 109549 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 109608

                                                                          
Query: 252    acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311
              ||||| |   |||||||  ||||| |||| ||| |     || ||| | |||||||||||
Sbjct: 109609 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 109668

                                                                          
Query: 312    aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371
               ||||| |||||||| ||||||||  |||||||  | || |||| |||||| ||||||||
Sbjct: 109669 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 109728

                  
Query: 372    acaa 375
              ||||
Sbjct: 109729 acaa 109732



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  143 bits (72), Expect = 5e-31
 Identities = 246/304 (80%)
 Strand = Plus / Minus

                                                                            
Query: 72       gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131
                |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || ||
Sbjct: 11020456 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 11020397

                                                                            
Query: 132      cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191
                |||||||||||||||||||||| ||| ||| |||||||||||  | ||||||||   |||
Sbjct: 11020396 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 11020337

                                                                            
Query: 192      ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251
                ||| || || |||||| || |||||||||||||||| | ||||| |||||| |||||  |
Sbjct: 11020336 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 11020277

                                                                            
Query: 252      acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311
                ||||| |   |||||||  ||||| |||| ||| |     || ||| | |||||||||||
Sbjct: 11020276 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 11020217

                                                                            
Query: 312      aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371
                 ||||| |||||||| ||||||||  |||||||  | || |||| |||||| ||||||||
Sbjct: 11020216 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 11020157

                    
Query: 372      acaa 375
                ||||
Sbjct: 11020156 acaa 11020153



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>dbj|AK111624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108I11, full
            insert sequence
          Length = 3398

 Score =  143 bits (72), Expect = 5e-31
 Identities = 246/304 (80%)
 Strand = Plus / Minus

                                                                        
Query: 72   gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131
            |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || ||
Sbjct: 1532 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 1473

                                                                        
Query: 132  cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191
            |||||||||||||||||||||| ||| ||| |||||||||||  | ||||||||   |||
Sbjct: 1472 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 1413

                                                                        
Query: 192  ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251
            ||| || || |||||| || |||||||||||||||| | ||||| |||||| |||||  |
Sbjct: 1412 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 1353

                                                                        
Query: 252  acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311
            ||||| |   |||||||  ||||| |||| ||| |     || ||| | |||||||||||
Sbjct: 1352 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 1293

                                                                        
Query: 312  aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371
             ||||| |||||||| ||||||||  |||||||  | || |||| |||||| ||||||||
Sbjct: 1292 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 1233

                
Query: 372  acaa 375
            ||||
Sbjct: 1232 acaa 1229



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>dbj|AK111530.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013024C10, full
            insert sequence
          Length = 2335

 Score =  143 bits (72), Expect = 5e-31
 Identities = 246/304 (80%)
 Strand = Plus / Minus

                                                                        
Query: 72   gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131
            |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || ||
Sbjct: 1528 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 1469

                                                                        
Query: 132  cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191
            |||||||||||||||||||||| ||| ||| |||||||||||  | ||||||||   |||
Sbjct: 1468 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 1409

                                                                        
Query: 192  ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251
            ||| || || |||||| || |||||||||||||||| | ||||| |||||| |||||  |
Sbjct: 1408 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 1349

                                                                        
Query: 252  acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311
            ||||| |   |||||||  ||||| |||| ||| |     || ||| | |||||||||||
Sbjct: 1348 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 1289

                                                                        
Query: 312  aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371
             ||||| |||||||| ||||||||  |||||||  | || |||| |||||| ||||||||
Sbjct: 1288 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 1229

                
Query: 372  acaa 375
            ||||
Sbjct: 1228 acaa 1225



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>dbj|AK106141.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G09, full
            insert sequence
          Length = 1786

 Score =  143 bits (72), Expect = 5e-31
 Identities = 246/304 (80%)
 Strand = Plus / Minus

                                                                        
Query: 72   gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131
            |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || ||
Sbjct: 1551 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 1492

                                                                        
Query: 132  cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191
            |||||||||||||||||||||| ||| ||| |||||||||||  | ||||||||   |||
Sbjct: 1491 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 1432

                                                                        
Query: 192  ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251
            ||| || || |||||| || |||||||||||||||| | ||||| |||||| |||||  |
Sbjct: 1431 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 1372

                                                                        
Query: 252  acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311
            ||||| |   |||||||  ||||| |||| ||| |     || ||| | |||||||||||
Sbjct: 1371 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 1312

                                                                        
Query: 312  aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371
             ||||| |||||||| ||||||||  |||||||  | || |||| |||||| ||||||||
Sbjct: 1311 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 1252

                
Query: 372  acaa 375
            ||||
Sbjct: 1251 acaa 1248



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>dbj|AK098942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043D15, full
            insert sequence
          Length = 1730

 Score =  143 bits (72), Expect = 5e-31
 Identities = 246/304 (80%)
 Strand = Plus / Minus

                                                                        
Query: 72   gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131
            |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || ||
Sbjct: 1531 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 1472

                                                                        
Query: 132  cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191
            |||||||||||||||||||||| ||| ||| |||||||||||  | ||||||||   |||
Sbjct: 1471 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 1412

                                                                        
Query: 192  ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251
            ||| || || |||||| || |||||||||||||||| | ||||| |||||| |||||  |
Sbjct: 1411 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 1352

                                                                        
Query: 252  acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311
            ||||| |   |||||||  ||||| |||| ||| |     || ||| | |||||||||||
Sbjct: 1351 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 1292

                                                                        
Query: 312  aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371
             ||||| |||||||| ||||||||  |||||||  | || |||| |||||| ||||||||
Sbjct: 1291 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 1232

                
Query: 372  acaa 375
            ||||
Sbjct: 1231 acaa 1228



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>dbj|AK060922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H05, full
            insert sequence
          Length = 1786

 Score =  143 bits (72), Expect = 5e-31
 Identities = 246/304 (80%)
 Strand = Plus / Minus

                                                                        
Query: 72   gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131
            |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || ||
Sbjct: 1551 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 1492

                                                                        
Query: 132  cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191
            |||||||||||||||||||||| ||| ||| |||||||||||  | ||||||||   |||
Sbjct: 1491 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 1432

                                                                        
Query: 192  ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251
            ||| || || |||||| || |||||||||||||||| | ||||| |||||| |||||  |
Sbjct: 1431 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 1372

                                                                        
Query: 252  acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311
            ||||| |   |||||||  ||||| |||| ||| |     || ||| | |||||||||||
Sbjct: 1371 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 1312

                                                                        
Query: 312  aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371
             ||||| |||||||| ||||||||  |||||||  | || |||| |||||| ||||||||
Sbjct: 1311 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 1252

                
Query: 372  acaa 375
            ||||
Sbjct: 1251 acaa 1248



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>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042B10, from chromosome 3, complete sequence
          Length = 144205

 Score =  143 bits (72), Expect = 5e-31
 Identities = 246/304 (80%)
 Strand = Plus / Minus

                                                                         
Query: 72    gacaagctcagtcgaaaccaaacttgggttctcctgttgcagagcgtacatcttatcggt 131
             |||||| ||||| | ||||||| | |||||||||||||||||| | || ||||| || ||
Sbjct: 67178 gacaaggtcagttggaaccaaagtcgggttctcctgttgcagaacatagatcttgtcagt 67119

                                                                         
Query: 132   cattccttccttccgataagcttccaacaagatggagtatgtgatggcatctggttcaca 191
             |||||||||||||||||||||| ||| ||| |||||||||||  | ||||||||   |||
Sbjct: 67118 cattccttccttccgataagctcccaccaaaatggagtatgttgtagcatctgggataca 67059

                                                                         
Query: 192   ctgcatatgtttcatgtgcctgaagaccctctccatttgcatcagatcctctgctttcgc 251
             ||| || || |||||| || |||||||||||||||| | ||||| |||||| |||||  |
Sbjct: 67058 ctgtatttgcttcatgcgcatgaagaccctctccatctccatcaaatcctcagcttttac 66999

                                                                         
Query: 252   acatgccgcaagaacagagttgtgaaaagatgtgtttggcggtacatcgagcctctcagc 311
             ||||| |   |||||||  ||||| |||| ||| |     || ||| | |||||||||||
Sbjct: 66998 acatgtcatgagaacagcattgtggaaagttgtatccattggcacaccaagcctctcagc 66939

                                                                         
Query: 312   aagctttaccatgcctaccaccttgcggaaaagggctgcgttgctaaacccgtttatgag 371
              ||||| |||||||| ||||||||  |||||||  | || |||| |||||| ||||||||
Sbjct: 66938 cagcttaaccatgccaaccaccttatggaaaagacccgcattgccaaacccatttatgag 66879

                 
Query: 372   acaa 375
             ||||
Sbjct: 66878 acaa 66875



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>gb|AY278988.1| Zea mays PPR2 (ppr2) gene, complete cds; nuclear gene for chloroplast
            product
          Length = 2781

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 191/239 (79%)
 Strand = Plus / Minus

                                                                        
Query: 97   gggttctcctgttgcagagcgtacatcttatcggtcattccttccttccgataagcttcc 156
            ||||||||||| |||||||| || ||||| ||||||||||| ||||| |||||||| |||
Sbjct: 2452 gggttctcctgatgcagagcatagatcttgtcggtcattccctccttgcgataagcctcc 2393

                                                                        
Query: 157  aacaagatggagtatgtgatggcatctggttcacactgcatatgtttcatgtgcctgaag 216
            | |||||| ||||| ||    ||||| || || |||||| |||| |||||| ||||||| 
Sbjct: 2392 accaagatagagtacgtcgaagcatcaggctcgcactgcgtatgcttcatgcgcctgaac 2333

                                                                        
Query: 217  accctctccatttgcatcagatcctctgctttcgcacatgccgcaagaacagagttgtga 276
            ||||||||||| | ||  ||||| || ||| | || || ||  |||||||||  ||||| 
Sbjct: 2332 accctctccatctccacgagatcgtccgctctagcgcacgcgccaagaacagcattgtgg 2273

                                                                       
Query: 277  aaagatgtgtttggcggtacatcgagcctctcagcaagctttaccatgcctaccacctt 335
            ||||  |||||    || || ||||||||||| || ||||| |||||||| ||||||||
Sbjct: 2272 aaaggcgtgttcacgggcacgtcgagcctctcggcgagcttcaccatgcccaccacctt 2214



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>gb|AC160543.13| Mus musculus chromosome 1, clone RP23-186L22, complete sequence
          Length = 212353

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      agaggaacagattttttattt 21
              |||||||||||||||||||||
Sbjct: 181811 agaggaacagattttttattt 181791



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>gb|AY512928.1| Mus musculus clone NIA:B0243C11 unknown mRNA
          Length = 2833

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    agaggaacagattttttattt 21
            |||||||||||||||||||||
Sbjct: 2396 agaggaacagattttttattt 2416



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>gb|AC137845.9| Mus musculus chromosome 1, clone RP23-430H22, complete sequence
          Length = 213882

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     agaggaacagattttttattt 21
             |||||||||||||||||||||
Sbjct: 39271 agaggaacagattttttattt 39251



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>gb|AC154791.3| Mus musculus BAC clone RP24-482P18 from chromosome 16, complete
             sequence
          Length = 188918

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    gaaaccaaacttgggttctc 104
             ||||||||||||||||||||
Sbjct: 10303 gaaaccaaacttgggttctc 10322



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>ref|XM_585910.2| PREDICTED: Bos taurus similar to Anion exchange protein 4 (Anion
            exchanger 4) (Solute carrier family 4 member 9) (Sodium
            bicarbonate cotransporter 5), transcript variant 1
            (LOC509031), mRNA
          Length = 3324

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 250  gcacatgccgcaagaacaga 269
            ||||||||||||||||||||
Sbjct: 2557 gcacatgccgcaagaacaga 2538



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>ref|XM_879635.1| PREDICTED: Bos taurus similar to Anion exchange protein 4 (Anion
            exchanger 4) (Solute carrier family 4 member 9) (Sodium
            bicarbonate cotransporter 5), transcript variant 2
            (LOC509031), mRNA
          Length = 3276

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 250  gcacatgccgcaagaacaga 269
            ||||||||||||||||||||
Sbjct: 2509 gcacatgccgcaagaacaga 2490



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>gb|AC116787.10| Mus musculus chromosome 6, clone RP24-296D21, complete sequence
          Length = 189538

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     gaaaccaaacttgggttctc 104
              ||||||||||||||||||||
Sbjct: 112793 gaaaccaaacttgggttctc 112774



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>gb|AC122511.5| Mus musculus BAC clone RP24-446A8 from chromosome 6, complete sequence
          Length = 157847

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    gaaaccaaacttgggttctc 104
             ||||||||||||||||||||
Sbjct: 33494 gaaaccaaacttgggttctc 33513



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>gb|AC133101.4| Mus musculus BAC clone RP23-154M23 from chromosome 15, complete sequence
          Length = 206189

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     gaaaccaaacttgggttctc 104
              ||||||||||||||||||||
Sbjct: 144368 gaaaccaaacttgggttctc 144349



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>gb|AC125202.3| Mus musculus BAC clone RP23-231N20 from chromosome 19, complete
             sequence
          Length = 207191

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    gaaaccaaacttgggttctc 104
             ||||||||||||||||||||
Sbjct: 39729 gaaaccaaacttgggttctc 39710



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>gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosome 12, complete
             sequence
          Length = 157435

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    aaccaaacttgggttctcct 106
             ||||||||||||||||||||
Sbjct: 82890 aaccaaacttgggttctcct 82871



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>gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, complete sequence
          Length = 233499

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     gaaaccaaacttgggttctc 104
              ||||||||||||||||||||
Sbjct: 111526 gaaaccaaacttgggttctc 111507



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>emb|AL663057.7| Mouse DNA sequence from clone RP23-7J19 on chromosome 11 Contains the
             Centa2 gene for centaurin alpha 2, a novel gene and the 3'
             end of a novel gene, complete sequence
          Length = 70600

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    gaaaccaaacttgggttctc 104
             ||||||||||||||||||||
Sbjct: 52295 gaaaccaaacttgggttctc 52276



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>emb|AL603702.14| Mouse DNA sequence from clone RP23-406A14 on chromosome 11 Contains a
             protease (prosome, macropain) 26S subunit ATPase 1 (Psmc1)
             pseudogene and a CpG island, complete sequence
          Length = 197265

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    aaccaaacttgggttctcct 106
             ||||||||||||||||||||
Sbjct: 53054 aaccaaacttgggttctcct 53073



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>emb|BX537880.1|HSM805986 Homo sapiens genomic DNA; cDNA DKFZp686C03114 (from clone
            DKFZp686C03114)
          Length = 5755

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 85   gaaaccaaacttgggttctc 104
            ||||||||||||||||||||
Sbjct: 3218 gaaaccaaacttgggttctc 3199



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>gb|AC120797.9| Mus musculus chromosome 18, clone RP24-81D18, complete sequence
          Length = 210631

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     gaaaccaaacttgggttctc 104
              ||||||||||||||||||||
Sbjct: 104784 gaaaccaaacttgggttctc 104765



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>gb|AC066616.7| Homo sapiens chromosome 15 clone RP11-925D8 map 15q21.3, complete
              sequence
          Length = 209779

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     gaaaccaaacttgggttctc 104
              ||||||||||||||||||||
Sbjct: 200927 gaaaccaaacttgggttctc 200946



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>gb|AY973541.1|AY973542S2 Hyaloperonospora parasitica isolate Emoy2 clone BAC 12I13, SP6 end
          Length = 57064

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   tgctttcgcacatgccgcaa 262
             ||||||||||||||||||||
Sbjct: 44602 tgctttcgcacatgccgcaa 44621



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>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete
             sequence
          Length = 173386

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    gaaaccaaacttgggttctc 104
             ||||||||||||||||||||
Sbjct: 51150 gaaaccaaacttgggttctc 51169



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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    taccatgcctaccaccttgc 337
              ||||||||||||||||||||
Sbjct: 939679 taccatgcctaccaccttgc 939660



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>emb|BX255891.5| Zebrafish DNA sequence from clone DKEY-263P20 in linkage group 20,
             complete sequence
          Length = 104855

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 266   cagagttgtgaaaagatgtgtttg 289
             |||||||||||| |||||||||||
Sbjct: 37038 cagagttgtgaacagatgtgtttg 37015



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>emb|CT030236.7| Mouse DNA sequence from clone RP23-445B11 on chromosome 16, complete
             sequence
          Length = 166709

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    gaaaccaaacttgggttctc 104
             ||||||||||||||||||||
Sbjct: 69101 gaaaccaaacttgggttctc 69082



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>gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, complete sequence
          Length = 189301

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    gaaaccaaacttgggttctc 104
             ||||||||||||||||||||
Sbjct: 83360 gaaaccaaacttgggttctc 83379



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>gb|AC149588.4| Mus musculus BAC clone RP23-366I10 from 15, complete sequence
          Length = 200656

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     gaaaccaaacttgggttctc 104
              ||||||||||||||||||||
Sbjct: 190017 gaaaccaaacttgggttctc 190036



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>emb|AL732572.10| Mouse DNA sequence from clone RP23-32C16 on chromosome 2, complete
              sequence
          Length = 213704

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     gaaaccaaacttgggttctc 104
              ||||||||||||||||||||
Sbjct: 181635 gaaaccaaacttgggttctc 181616



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>emb|AL611950.17| Mouse DNA sequence from clone RP23-45A18 on chromosome 4, complete
            sequence
          Length = 161331

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 85   gaaaccaaacttgggttctc 104
            ||||||||||||||||||||
Sbjct: 4262 gaaaccaaacttgggttctc 4243


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,101,404
Number of Sequences: 3902068
Number of extensions: 4101404
Number of successful extensions: 53817
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53723
Number of HSP's gapped (non-prelim): 93
length of query: 375
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 353
effective length of database: 17,147,199,772
effective search space: 6052961519516
effective search space used: 6052961519516
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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