>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
             OSJNBa0031O09, complete sequence
          Length = 161339

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 260   tgctgtaaaattgtggaggcgttgacagtactgtccagggga 301
             ||||||||||| |||||||||| |||   |||||||||||||
Sbjct: 29634 tgctgtaaaatggtggaggcgtcgaccacactgtccagggga 29675

>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map
              near C10769, complete sequence
          Length = 194856

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 260    tgctgtaaaattgtggaggcgttgacagtactgtccagggga 301
              ||||||||||| |||||||||| |||   |||||||||||||
Sbjct: 149798 tgctgtaaaatggtggaggcgtcgaccacactgtccagggga 149757

>gb|AC147426.2| Oryza sativa chromosome 3  B1377B10 genomic sequence, complete sequence
          Length = 184366

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 260    tgctgtaaaattgtggaggcgttgacagtactgtccagggga 301
              ||||||||||| |||||||||| |||   |||||||||||||
Sbjct: 172788 tgctgtaaaatggtggaggcgtcgaccacactgtccagggga 172829

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 260      tgctgtaaaattgtggaggcgttgacagtactgtccagggga 301
                ||||||||||| |||||||||| |||   |||||||||||||
Sbjct: 28989493 tgctgtaaaatggtggaggcgtcgaccacactgtccagggga 28989534

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 260      tgctgtaaaattgtggaggcgttgacagtactgtccagggga 301
                ||||||||||| |||||||||| |||   |||||||||||||
Sbjct: 29080915 tgctgtaaaatggtggaggcgtcgaccacactgtccagggga 29080956

>dbj|AK106706.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E11, full
            insert sequence
          Length = 1890

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 260  tgctgtaaaattgtggaggcgttgacagtactgtccagggga 301
            ||||||||||| |||||||||| |||   |||||||||||||
Sbjct: 1627 tgctgtaaaatggtggaggcgtcgaccacactgtccagggga 1586

>gb|AC119952.12| Mus musculus chromosome 14, clone RP24-448F1, complete sequence
          Length = 181695

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    ctctgaagtttcagaaacacc 92
             |||||||||||||||||||||
Sbjct: 10567 ctctgaagtttcagaaacacc 10587

>gb|AC164635.5| Mus musculus BAC clone RP23-65G17 from chromosome 16, complete sequence
          Length = 162255

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    ttttatttctctgaagtttca 84
             |||||||||||||||||||||
Sbjct: 84311 ttttatttctctgaagtttca 84331

>gb|AC116328.3| Mus musculus BAC clone RP24-131I17 from 15, complete sequence
          Length = 149291

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    cactgttttatttctctgaag 79
             |||||||||||||||||||||
Sbjct: 64526 cactgttttatttctctgaag 64546

>gb|AC122451.3| Mus musculus BAC clone RP24-252G15 from 16, complete sequence
          Length = 160256

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     ttttatttctctgaagtttca 84
              |||||||||||||||||||||
Sbjct: 144856 ttttatttctctgaagtttca 144876

>gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, complete sequence
          Length = 189590

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     ttttatttctctgaagtttca 84
              |||||||||||||||||||||
Sbjct: 113931 ttttatttctctgaagtttca 113951

>gb|AC109469.2| Homo sapiens chromosome 5 clone RP11-349F8, complete sequence
          Length = 184776

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    ttttatttctctgaagtttca 84
             |||||||||||||||||||||
Sbjct: 23075 ttttatttctctgaagtttca 23095

>emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on chromosome 1, complete
             sequence
          Length = 113420

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    tgttttatttctctgaagtt 81
             ||||||||||||||||||||
Sbjct: 42923 tgttttatttctctgaagtt 42942

>emb|BX537137.13| Zebrafish DNA sequence from clone DKEYP-87D1 in linkage group 20
             Contains two novel genes and two CpG islands, complete
             sequence
          Length = 200339

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    caacatattttgttcctaca 49
             ||||||||||||||||||||
Sbjct: 41995 caacatattttgttcctaca 41976

>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 68      atttctctgaagtttcagaa 87
               ||||||||||||||||||||
Sbjct: 1284842 atttctctgaagtttcagaa 1284823

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    atatgaagtggcaaagaaga 143
              ||||||||||||||||||||
Sbjct: 880884 atatgaagtggcaaagaaga 880903

>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1442_E05
          Length = 162407

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   atatgaagtggcaaagaaga 143
             ||||||||||||||||||||
Sbjct: 90092 atatgaagtggcaaagaaga 90111

>gb|AY108588.1| Zea mays PCO139593 mRNA sequence
          Length = 592

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 atgaagtggcaaagaagagc 145
           ||||||||||||||||||||
Sbjct: 31  atgaagtggcaaagaagagc 50

>gb|AC006270.1|AC006270 Homo sapiens chromosome 17, clone hRPK.556_O_9, complete sequence
          Length = 179929

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 159    tttcctggaactgggtgactattc 182
              ||||||| ||||||||||||||||
Sbjct: 158559 tttcctgcaactgggtgactattc 158582


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,310,182
Number of Sequences: 3902068
Number of extensions: 4310182
Number of successful extensions: 77447
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77339
Number of HSP's gapped (non-prelim): 108
length of query: 438
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 416
effective length of database: 17,147,199,772
effective search space: 7133235105152
effective search space used: 7133235105152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)