Clone Name | rbart45e03 |
---|---|
Clone Library Name | barley_pub |
>KCAB_ORYSA (Q40648) Probable voltage-gated potassium channel beta subunit| (K(+) channel beta subunit) Length = 328 Score = 125 bits (313), Expect = 6e-29 Identities = 65/83 (78%), Positives = 69/83 (83%) Frame = -1 Query: 439 DTLRKVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXX 260 DTLRKVNGLKPIASELGVS+AQL IAWCASNPNVSSVITGATKE+QIVENMKA Sbjct: 246 DTLRKVNGLKPIASELGVSLAQLAIAWCASNPNVSSVITGATKENQIVENMKALDVIPLL 305 Query: 259 XXXXXEKIEAVIQSKPKRLESYR 191 +KIEAV+QSKPKR ESYR Sbjct: 306 TPEVVDKIEAVVQSKPKRTESYR 328
>KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 408 Score = 59.3 bits (142), Expect = 4e-09 Identities = 27/79 (34%), Positives = 44/79 (55%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ L PIA LG ++ QL +AWC N VSSV+ G++ Q++EN+ A Sbjct: 329 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 388 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I+ ++++KP + YR Sbjct: 389 VNEIDNILRNKPYSKKDYR 407
>KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 419 Score = 59.3 bits (142), Expect = 4e-09 Identities = 27/79 (34%), Positives = 44/79 (55%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ L PIA LG ++ QL +AWC N VSSV+ G++ Q++EN+ A Sbjct: 340 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 399 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I+ ++++KP + YR Sbjct: 400 VNEIDNILRNKPYSKKDYR 418
>KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 419 Score = 59.3 bits (142), Expect = 4e-09 Identities = 27/79 (34%), Positives = 44/79 (55%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ L PIA LG ++ QL +AWC N VSSV+ G++ Q++EN+ A Sbjct: 340 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 399 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I+ ++++KP + YR Sbjct: 400 VNEIDNILRNKPYSKKDYR 418
>KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 59.3 bits (142), Expect = 4e-09 Identities = 27/79 (34%), Positives = 44/79 (55%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ L PIA LG ++ QL +AWC N VSSV+ G++ Q++EN+ A Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 381 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I+ ++++KP + YR Sbjct: 382 VNEIDNILRNKPYSKKDYR 400
>KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 59.3 bits (142), Expect = 4e-09 Identities = 27/79 (34%), Positives = 44/79 (55%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ L PIA LG ++ QL +AWC N VSSV+ G++ Q++EN+ A Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 381 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I+ ++++KP + YR Sbjct: 382 VNEIDNILRNKPYSKKDYR 400
>KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 59.3 bits (142), Expect = 4e-09 Identities = 27/79 (34%), Positives = 44/79 (55%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ L PIA LG ++ QL +AWC N VSSV+ G++ Q++EN+ A Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 381 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I+ ++++KP + YR Sbjct: 382 VNEIDNILRNKPYSKKDYR 400
>KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 58.5 bits (140), Expect = 7e-09 Identities = 27/79 (34%), Positives = 43/79 (54%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ L PIA LG ++ QL +AWC N VSSV+ G++ Q++EN+ A Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSNPEQLIENLGAIQVLPKMTSHI 381 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I+ ++ +KP + YR Sbjct: 382 VNEIDNILGNKPYSKKDYR 400
>KCAB2_RAT (P62483) Voltage-gated potassium channel beta-2 subunit (K(+)| channel beta-2 subunit) (Kv-beta-2) Length = 367 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/79 (35%), Positives = 44/79 (55%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ L+ IA LG ++ QL IAWC N VSSV+ GA+ Q++EN+ A Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSI 347 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I++++ +KP + YR Sbjct: 348 VHEIDSILGNKPYSKKDYR 366
>KCAB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subunit (K(+)| channel beta-2 subunit) (Kv-beta-2) (Neuroimmune protein F5) Length = 367 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/79 (35%), Positives = 44/79 (55%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ L+ IA LG ++ QL IAWC N VSSV+ GA+ Q++EN+ A Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSI 347 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I++++ +KP + YR Sbjct: 348 VHEIDSILGNKPYSKKDYR 366
>KCAB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subunit (K(+)| channel beta-2 subunit) (Kv-beta-2) (HKvbeta2) Length = 367 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/79 (35%), Positives = 44/79 (55%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ L+ IA LG ++ QL IAWC N VSSV+ GA+ Q++EN+ A Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSI 347 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I++++ +KP + YR Sbjct: 348 IHEIDSILGNKPYSKKDYR 366
>KCAB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subunit (K(+)| channel beta-2 subunit) (Kv-beta-2) Length = 367 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/79 (35%), Positives = 44/79 (55%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ L+ IA LG ++ QL IAWC N VSSV+ GA+ Q++EN+ A Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASSADQLMENIGAIQVLPKLSSSI 347 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I++++ +KP + YR Sbjct: 348 IHEIDSILGNKPYSKKDYR 366
>KCAB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subunit (K(+)| channel beta-2 subunit) (Kv-beta-2) Length = 367 Score = 55.5 bits (132), Expect = 6e-08 Identities = 27/79 (34%), Positives = 42/79 (53%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 K+ + IA LG ++ QL IAWC N VSSV+ GA+ Q++EN+ A Sbjct: 288 KLKEFQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLLENIGAIQVLPKLSSSI 347 Query: 247 XEKIEAVIQSKPKRLESYR 191 +I+ ++ +KP + YR Sbjct: 348 IHEIDGILGNKPYSKKDYR 366
>KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subunit (K(+)| channel beta-3 subunit) (Kv-beta-3) Length = 404 Score = 53.1 bits (126), Expect = 3e-07 Identities = 25/72 (34%), Positives = 41/72 (56%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 KV L P+A +LG ++AQL IAWC + VSSV+ G + Q++E++ A Sbjct: 329 KVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLIEHLGALQVLSQLTPQT 388 Query: 247 XEKIEAVIQSKP 212 +I+ ++ +KP Sbjct: 389 VMEIDGLLGNKP 400
>KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subunit (K(+)| channel beta-3 subunit) (Kv-beta-3) Length = 401 Score = 50.1 bits (118), Expect = 2e-06 Identities = 25/72 (34%), Positives = 38/72 (52%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 KV L PIA L ++ QL IAWC + VSSV+ G + Q++EN+ A Sbjct: 322 KVKELHPIADRLNCTVTQLAIAWCLRSEGVSSVLLGVSNIEQLLENLGAIQVLPHLTPQL 381 Query: 247 XEKIEAVIQSKP 212 +I+ ++ +KP Sbjct: 382 VTEIDQILGNKP 393
>KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subunit (K(+)| channel beta-3 subunit) (Kv-beta-3) (RCK beta3) Length = 404 Score = 49.7 bits (117), Expect = 3e-06 Identities = 24/71 (33%), Positives = 41/71 (57%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 +V L PIA +LG ++AQL IAWC + VSSV+ G + Q++E++ + Sbjct: 329 RVTDLLPIAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLMEHLGSLQVLGQLTPQT 388 Query: 247 XEKIEAVIQSK 215 +I+A++ +K Sbjct: 389 VMEIDALLGNK 399
>KCAB3_MOUSE (P97382) Voltage-gated potassium channel beta-3 subunit (K(+)| channel beta-3 subunit) (Kv-beta-3) Length = 249 Score = 45.8 bits (107), Expect = 5e-05 Identities = 22/71 (30%), Positives = 39/71 (54%) Frame = -1 Query: 427 KVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKAXXXXXXXXXXX 248 +V L P A +LG ++ QL IAWC + VSSV+ G + Q++E++ + Sbjct: 174 RVMDLLPTARQLGCTVGQLAIAWCLRSEGVSSVLLGVSSAEQLMEHLGSLQVLSQLTPQT 233 Query: 247 XEKIEAVIQSK 215 +I+A++ +K Sbjct: 234 VVEIDALLGNK 244
>IOLS_BACSU (P46336) Protein iolS (EC 1.1.1.-) (Vegetative protein 147)| (VEG147) (AKR11A) Length = 310 Score = 43.9 bits (102), Expect = 2e-04 Identities = 18/52 (34%), Positives = 32/52 (61%) Frame = -1 Query: 439 DTLRKVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMK 284 + +RKVN L PIA + V + + +AW + P + +I GA + Q+++N+K Sbjct: 240 ENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIK 291
>YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-)| Length = 310 Score = 41.2 bits (95), Expect = 0.001 Identities = 17/50 (34%), Positives = 30/50 (60%) Frame = -1 Query: 433 LRKVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMK 284 L+KV+ LK +A E A + +AW + P + ++I GA + Q+ +N+K Sbjct: 242 LKKVDKLKAVAEEKQADTAHVALAWLLTRPAIDAIIPGAKRPEQLQDNLK 291
>YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ| Length = 346 Score = 40.8 bits (94), Expect = 0.001 Identities = 18/51 (35%), Positives = 32/51 (62%) Frame = -1 Query: 433 LRKVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKA 281 L + L +A + G SMAQ+ ++W + V+SV+ GA++ Q+ EN++A Sbjct: 264 LNSLRLLNEMAQQRGQSMAQMALSWLLKDERVTSVLVGASRAEQLEENVQA 314
>YGHZ_ECOLI (Q46851) Hypothetical protein yghZ| Length = 346 Score = 40.4 bits (93), Expect = 0.002 Identities = 18/51 (35%), Positives = 32/51 (62%) Frame = -1 Query: 433 LRKVNGLKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKA 281 L + L +A + G SMAQ+ ++W + V+SV+ GA++ Q+ EN++A Sbjct: 264 LNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQA 314
>YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-)| Length = 324 Score = 38.5 bits (88), Expect = 0.007 Identities = 16/45 (35%), Positives = 28/45 (62%) Frame = -1 Query: 415 LKPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKA 281 L ++ ELG + AQ+ +AW S P +++ I G ++E Q+ E + A Sbjct: 254 LTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNA 298
>NPFF_BOVIN (Q9TUX7) FMRFamide-related peptides precursor [Contains:| Neuropeptide SF (NPSF); Neuropeptide FF (NPFF); Neuropeptide AF (NPAF)] Length = 115 Score = 38.1 bits (87), Expect = 0.010 Identities = 27/62 (43%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = -3 Query: 302 DRGEHEGPGGRPAADSGGPGEDRGGHPEQ-AQAPRVVQMKHSVLSAVQRVPSTWWDFFPG 126 D EGPGGR D ED G HP Q AQ PR + S+L A+QR PG Sbjct: 18 DWSHAEGPGGRDGGDQIFMEEDSGAHPAQDAQTPR--SLLRSLLQAMQR---------PG 66 Query: 125 RS 120 RS Sbjct: 67 RS 68
>EWS_MOUSE (Q61545) RNA-binding protein EWS| Length = 655 Score = 33.9 bits (76), Expect = 0.18 Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Frame = -3 Query: 305 PDRGEHEGPGGR--PAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSTWWDFF 132 P RG GPGG P GG G DRGG P + PR + S VQ W Sbjct: 468 PLRGGPGGPGGPGGPMGRMGGRGGDRGGFP--PRGPRGSRGNPSGGGNVQHRAGDWQCPN 525 Query: 131 PGRSISLYLVF*NYTWLLLCSRC 63 PG N+ W C++C Sbjct: 526 PGCGNQ------NFAWRTECNQC 542
>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma| breakpoint region 1 protein) Length = 656 Score = 33.9 bits (76), Expect = 0.18 Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Frame = -3 Query: 305 PDRGEHEGPGGR--PAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSTWWDFF 132 P RG GPGG P GG G DRGG P + PR + S VQ W Sbjct: 469 PLRGGPGGPGGPGGPMGRMGGRGGDRGGFP--PRGPRGSRGNPSGGGNVQHRAGDWQCPN 526 Query: 131 PGRSISLYLVF*NYTWLLLCSRC 63 PG N+ W C++C Sbjct: 527 PGCGNQ------NFAWRTECNQC 543
>RESIL_DROME (Q9V7U0) Pro-resilin precursor| Length = 620 Score = 33.5 bits (75), Expect = 0.24 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%) Frame = -3 Query: 320 GHQRKPDR-----GEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 204 G +KP G G GGRP++ G PG GG P + P Sbjct: 274 GQNQKPSDSYGAPGSGNGNGGRPSSSYGAPGSGPGGRPSDSYGP 317 Score = 31.6 bits (70), Expect = 0.89 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -3 Query: 305 PDRGEHEGPGGRPAADSGGPGEDRGG 228 P G G GGRP++ G PG+ +GG Sbjct: 236 PGGGNGNGSGGRPSSSYGAPGQGQGG 261 Score = 31.6 bits (70), Expect = 0.89 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -3 Query: 284 GPGGRPAADSGGPGEDRGGHPEQA 213 GPGGRP+ G PG GG P + Sbjct: 40 GPGGRPSDSYGAPGGGNGGRPSDS 63 Score = 30.8 bits (68), Expect = 1.5 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 305 PDRGEHEGPGGRPAADSGGPGEDRGGHP 222 P +G+ G GGR ++ G PG GG P Sbjct: 156 PGQGQGNGNGGRSSSSYGAPGGGNGGRP 183 Score = 29.6 bits (65), Expect = 3.4 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -3 Query: 296 GEHEGPGGRPAADSGGPGEDRGGHP 222 G G GGRP++ G PG GG P Sbjct: 92 GGGNGNGGRPSSSYGAPGGGNGGRP 116
>YQKF_BACSU (P54569) Hypothetical oxidoreductase yqkF (EC 1.-.-.-)| Length = 306 Score = 32.7 bits (73), Expect = 0.40 Identities = 15/36 (41%), Positives = 25/36 (69%) Frame = -1 Query: 388 VSMAQLGIAWCASNPNVSSVITGATKESQIVENMKA 281 +SM + + + + P V+SVITGA+K Q+ EN++A Sbjct: 243 LSMTEKSLQYLLAQPAVASVITGASKIEQLRENIQA 278
>LRP12_MOUSE (Q8BUJ9) Low-density lipoprotein receptor-related protein 12| precursor Length = 858 Score = 31.2 bits (69), Expect = 1.2 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -3 Query: 284 GPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPS--TWWDFFPGRSIS 114 G GG +A S G G +AP V +H + SA+ R+ W F GRS S Sbjct: 690 GSGGNSSAQSTRGGHADGREVSSVEAPSVSPARHQLTSALSRMTQGLRWVRFTLGRSSS 748
>YDJG_ECOLI (P77256) Hypothetical oxidoreductase ydjG (EC 1.-.-.-)| Length = 326 Score = 30.8 bits (68), Expect = 1.5 Identities = 12/44 (27%), Positives = 25/44 (56%) Frame = -1 Query: 412 KPIASELGVSMAQLGIAWCASNPNVSSVITGATKESQIVENMKA 281 +P+ + ++ L +AW ++ S+++GAT Q+ EN+ A Sbjct: 261 QPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAA 304
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/45 (40%), Positives = 21/45 (46%) Frame = -3 Query: 317 HQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKH 183 + +K G G GG A SGGPG GG Q+Q Q KH Sbjct: 416 YAKKGPGGARPGTGGPVGARSGGPGRGAGGGQGQSQGQG--QRKH 458
>OVO_DROME (P51521) Protein ovo (Protein shaven baby)| Length = 1351 Score = 30.0 bits (66), Expect = 2.6 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -3 Query: 296 GEHEGPGGRPAADSGGPGEDRGGH 225 G GPGG P+A+SGG G GG+ Sbjct: 585 GGASGPGGGPSANSGGGGGGGGGN 608
>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)| (CeSF2/ASF) Length = 258 Score = 30.0 bits (66), Expect = 2.6 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 9/39 (23%) Frame = -3 Query: 284 GPGGRPAADS---------GGPGEDRGGHPEQAQAPRVV 195 GPGGRP D GG G RGG P++ RV+ Sbjct: 88 GPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVI 126
>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Plakophilin-related armadillo repeat protein-interacting PDZ protein) Length = 2766 Score = 30.0 bits (66), Expect = 2.6 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -3 Query: 305 PDRGEHEGPGGRPAADS-GGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRV 156 P+ G H G G +++ PG+ R HP+ ++ P V + H S Q V Sbjct: 1158 PECGPHPGTGWDGSSEHLCSPGKSREVHPDSSETPTVAEQVHQPESLSQPV 1208
>ETV4_MOUSE (P28322) ETS translocation variant 4 (Polyomavirus enhancer| activator 3) (PEA3 protein) Length = 555 Score = 29.6 bits (65), Expect = 3.4 Identities = 21/65 (32%), Positives = 28/65 (43%) Frame = -3 Query: 320 GHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSTWW 141 GH P + PG + +A + GPG GG + +MK L QRVP T+ Sbjct: 42 GHAEHPPAAPAQTPGPQVSASARGPGPVAGGSGRMER-----RMKGGYLD--QRVPYTFC 94 Query: 140 DFFPG 126 PG Sbjct: 95 SKSPG 99
>SPAG8_HUMAN (Q99932) Sperm-associated antigen 8 (Sperm membrane protein 1)| (SMP-1) (HSD-1) (Sperm membrane protein BS-84) Length = 426 Score = 29.6 bits (65), Expect = 3.4 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -3 Query: 305 PDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 204 P G GPG P + GPG G HP A P Sbjct: 169 PGSGSGPGPGSGPGS---GPGHGSGSHPGPASGP 199
>ZBP1_HUMAN (Q9H171) Z-DNA-binding protein 1 (Tumor stroma and activated| macrophage protein DLM-1) Length = 429 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -3 Query: 284 GPGGRPAADSGGPGEDRGGHPEQAQA 207 GPGG + G PGED G P Q+ Sbjct: 348 GPGGVAGSGEGEPGEDAGRRPADTQS 373
>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC| 2.7.12.1) (Testicular protein kinase 1) Length = 626 Score = 29.3 bits (64), Expect = 4.4 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = -3 Query: 314 QRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRV 156 +R P RG GPG P GPG GG P + + P ++ S +S++ RV Sbjct: 4 ERPPLRGPGPGPGEVPGEGPPGPG-GTGGGPGRGR-PSSYRVLRSAVSSLARV 54
>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) (Fragment) Length = 1048 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 4/44 (9%) Frame = -3 Query: 305 PDRGEHEGPGGRPAADSGGPG----EDRGGHPEQAQAPRVVQMK 186 P G PGG P GPG EDR G +Q Q + Q + Sbjct: 803 PPHGPFVRPGGMPGLGGPGPGPGGSEDRDGRQQQPQQQQQQQQQ 846
>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) Length = 1147 Score = 28.9 bits (63), Expect = 5.8 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%) Frame = -3 Query: 305 PDRGEHEGPGGRPAADSGGPG----EDRGGHPEQAQAPR 201 P G PGG P GPG EDR G + Q P+ Sbjct: 910 PPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQ 948
>RS6_RHOCA (O68126) 30S ribosomal protein S6| Length = 144 Score = 28.9 bits (63), Expect = 5.8 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 7/40 (17%) Frame = -3 Query: 314 QRKPDRGEHEGPGGR-------PAADSGGPGEDRGGHPEQ 216 Q++ DRG+ E G R P D GP EDRG PE+ Sbjct: 105 QKRDDRGDREERGDRGDRGDRGPRGDR-GPREDRGPRPER 143
>T22D4_HUMAN (Q9Y3Q8) TSC22 domain family protein 4 (TSC22-related-inducible| leucine zipper protein 2) (Tsc-22-like protein THG-1) Length = 395 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Frame = -3 Query: 281 PGGRPAADSGGPGEDRGGHPEQAQAP----RVVQMKHSV 177 P G P+ D GG G R G P AP RVV++ H + Sbjct: 44 PNGEPSPDPGGKGTPRNGSPPPG-APSSRFRVVKLPHGL 81
>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)| Length = 5120 Score = 28.9 bits (63), Expect = 5.8 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -3 Query: 260 DSGGPGEDRG--GHPEQAQAPRVVQMKHSVLSAVQRVPST 147 + G P E RG HP Q Q+P++VQ + V Q+ S+ Sbjct: 109 EQGKPEEQRGLAKHPSQQQSPKLVQQQGPVKPTPQQTESS 148
>DBP10_CRYNE (Q5KMS9) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 802 Score = 28.9 bits (63), Expect = 5.8 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -3 Query: 299 RGEHEGPGGRPAADSGGPGEDRGGHPEQAQ 210 RG H PG + A+ G GED GG + Q Sbjct: 712 RGRHGPPGQKRKAEDGDGGEDAGGKGRKDQ 741
>VG48_SHV21 (Q01033) Hypothetical gene 48 protein| Length = 797 Score = 28.9 bits (63), Expect = 5.8 Identities = 13/28 (46%), Positives = 13/28 (46%) Frame = -3 Query: 302 DRGEHEGPGGRPAADSGGPGEDRGGHPE 219 D GE EG G D G GED G E Sbjct: 648 DEGEDEGDEGEDEGDEGDEGEDEGDEGE 675 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/28 (46%), Positives = 13/28 (46%) Frame = -3 Query: 302 DRGEHEGPGGRPAADSGGPGEDRGGHPE 219 D GE EG G D G GED G E Sbjct: 655 DEGEDEGDEGDEGEDEGDEGEDEGDEGE 682 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/28 (46%), Positives = 13/28 (46%) Frame = -3 Query: 302 DRGEHEGPGGRPAADSGGPGEDRGGHPE 219 D GE EG G D G GED G E Sbjct: 603 DEGEDEGDEGDEGEDEGDEGEDEGDEGE 630
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 28.9 bits (63), Expect = 5.8 Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Frame = -3 Query: 290 HEGPGG---RPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSTWWDFFPGRS 120 H+GPG R GGP EDRGG P QRVP + GRS Sbjct: 1236 HDGPGTSEHREMEAPGGPSEDRGGKGRGGPGP------------AQRVPKS------GRS 1277 Query: 119 ISL 111 SL Sbjct: 1278 SSL 1280
>RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (RNA-binding| protein 56) (TAFII68) (TAF(II)68) Length = 592 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -3 Query: 302 DRGEHEGPGGRPAADSGGPGEDRGGH 225 DRG + G G D GG G DRGG+ Sbjct: 497 DRGGYGGDRGGYGGDRGGYGGDRGGY 522
>PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precursor (Salivary| proline-rich protein) [Contains: Basic peptide IB-6; Peptide P-H] Length = 392 Score = 28.5 bits (62), Expect = 7.6 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -3 Query: 296 GEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 204 G+ +GP + + GP GG+P+Q QAP Sbjct: 340 GKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP 370
>PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Salivary| proline-rich protein) (Con1 glycoprotein) [Contains: Basic peptide P-F] (Fragment) Length = 382 Score = 28.5 bits (62), Expect = 7.6 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -3 Query: 296 GEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 204 G+ +GP + + GP GG+P+Q QAP Sbjct: 330 GKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP 360
>PUF6_YEAST (Q04373) Protein PUF6| Length = 656 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/53 (26%), Positives = 22/53 (41%) Frame = -3 Query: 302 DRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSTW 144 D EHE G + G H EQ + + +M+ + VQ++ S W Sbjct: 79 DSEEHENENEEKEGKDKSEGGENGNHTEQRKLLKERKMQRKSGTQVQQIKSVW 131
>GLUB1_ORYSA (P14323) Glutelin type-B 1 precursor [Contains: Glutelin type-B 1| acidic chain; Glutelin type-B 1 basic chain] Length = 499 Score = 28.5 bits (62), Expect = 7.6 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +2 Query: 2 MKNGVVLIRPTRQQNVSHAEHTDYTGGAMYSFRKPDTGR*TGQGKN 139 +KNG+ L++PT Q A+ D YS R+ + R G +N Sbjct: 262 VKNGLQLLKPTLTQQQEQAQAQDQYQQVQYSERQQTSSRWNGLEEN 307
>SRCA_HUMAN (Q86TD4) Sarcalumenin precursor| Length = 932 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 302 DRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQ 192 D+GE GP +A+ GG + G E++QAP + + Sbjct: 266 DQGE-PGPAAEASAEPGGAQSVKAGDTEESQAPEMTE 301 Score = 28.5 bits (62), Expect = 7.6 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -3 Query: 293 EHEGPGGRPAADSGGPGEDRGGHPEQAQAP 204 E PG R D+ GPGE++ G P + P Sbjct: 104 ESPPPGERDDRDAAGPGEEKNGPPVASALP 133
>FBRL_GIALA (Q24957) Fibrillarin| Length = 327 Score = 28.5 bits (62), Expect = 7.6 Identities = 15/31 (48%), Positives = 16/31 (51%) Frame = -3 Query: 320 GHQRKPDRGEHEGPGGRPAADSGGPGEDRGG 228 G R RG +GPGGR GGPG GG Sbjct: 62 GPDRGDRRGPRDGPGGR-----GGPGGPGGG 87
>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4| (Trithorax homolog 2) Length = 2715 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = -3 Query: 281 PGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSTWWDFF 132 PG R A +GGP E+ HP + ++Q K S V++ PS +D F Sbjct: 1043 PGPRRGAGAGGPREEVVAHPGPEEQDSLLQRK-SARRCVKQRPS--YDIF 1089
>YO43_CAEEL (P34681) Hypothetical protein ZK757.3| Length = 1040 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -3 Query: 308 KPDRGEHEGPGGRPAADSGGPGEDRGG 228 KP+R GPGG GGPG RGG Sbjct: 325 KPNRNNPRGPGG-----PGGPGGYRGG 346 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,598,520 Number of Sequences: 219361 Number of extensions: 1265683 Number of successful extensions: 4749 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 4276 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4725 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)