>gb|AC004850.3| Homo sapiens PAC clone RP4-665C4 from 7, complete sequence
          Length = 105891

 Score = 38.2 bits (19), Expect = 0.73
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     atgcccaaatcttattatt 33
              |||||||||||||||||||
Sbjct: 102009 atgcccaaatcttattatt 102027

>gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosome 12, complete sequence
          Length = 201050

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 15     atgcccaaatcttattat 32
              ||||||||||||||||||
Sbjct: 104012 atgcccaaatcttattat 104029

>gb|AC134596.3| Mus musculus BAC clone RP23-435C1 from chromosome 12, complete
            sequence
          Length = 193068

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 15   atgcccaaatcttattat 32
            ||||||||||||||||||
Sbjct: 4219 atgcccaaatcttattat 4202

>gb|AC127334.3| Mus musculus BAC clone RP23-137P16 from chromosome 3, complete sequence
          Length = 180760

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 9     gaaaccatgcccaaatct 26
             ||||||||||||||||||
Sbjct: 77145 gaaaccatgcccaaatct 77162

>emb|BX276112.19| Zebrafish DNA sequence from clone CH211-220I12 in linkage group 24,
              complete sequence
          Length = 146065

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 10     aaaccatgcccaaatctt 27
              ||||||||||||||||||
Sbjct: 129239 aaaccatgcccaaatctt 129256

>emb|AL442003.8| Human DNA sequence from clone RP11-324H6 on chromosome 10 Contains the
             gene for a novel protein similar to ARF GTPase-activating
             protein (MRIP2), the 3' end of the gene for translocase of
             inner mitochondrial membrane 23 (TIMM23), a novel gene, a
             solute carrier family 9 isoform 3 (SLC9A3) pseudogene, a
             novel gene, the 5' end of gene FLJ10824, a pseudogene
             similar to part of KIAA0592/FLJ10824 and two CpG islands,
             complete sequence
          Length = 163570

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 11    aaccatgcccaaatctta 28
             ||||||||||||||||||
Sbjct: 65493 aaccatgcccaaatctta 65510

>ref|XM_967461.1| PREDICTED: Tribolium castaneum similar to CG6700-PA (LOC661290),
           mRNA
          Length = 2061

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 2   gcccccggaaaccatgcc 19
           ||||||||||||||||||
Sbjct: 552 gcccccggaaaccatgcc 569

>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 1       ggcccccggaaaccatgc 18
               ||||||||||||||||||
Sbjct: 2431940 ggcccccggaaaccatgc 2431923

>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 3       cccccggaaaccatgccc 20
               ||||||||||||||||||
Sbjct: 1663696 cccccggaaaccatgccc 1663679

>gb|BT008613.1| Arabidopsis thaliana clone RAFL15-32-C04 (R20929) putative
            mitochondrial carrier protein (At5g64970) mRNA, complete
            cds
          Length = 1673

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 16   tgcccaaatcttattatt 33
            ||||||||||||||||||
Sbjct: 1658 tgcccaaatcttattatt 1641

>gb|AC142113.2| Mus musculus BAC clone RP23-444K20 from chromosome 9, complete
            sequence
          Length = 188724

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 13   ccatgcccaaatcttatt 30
            ||||||||||||||||||
Sbjct: 3089 ccatgcccaaatcttatt 3072

>gb|AC151971.3| Mus musculus BAC clone RP24-282C4 from 9, complete sequence
          Length = 179607

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 13    ccatgcccaaatcttatt 30
             ||||||||||||||||||
Sbjct: 94870 ccatgcccaaatcttatt 94887


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 203,475
Number of Sequences: 3902068
Number of extensions: 203475
Number of successful extensions: 51843
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51796
Number of HSP's gapped (non-prelim): 47
length of query: 33
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 13
effective length of database: 17,155,003,908
effective search space: 223015050804
effective search space used: 223015050804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)