ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart45d07 |
|---|---|
| Clone Library Name | barley_pub |
>AKR2_ARATH (Q9SAR5) Ankyrin repeat domain-containing protein 2 (AtAKR2)| Length = 342 Score = 55.1 bits (131), Expect = 4e-08 Identities = 27/33 (81%), Positives = 30/33 (90%) Frame = -2 Query: 401 VTLQNMDGKTPIDVAKLNNQDEVLKLLEKDVFL 303 VTLQN+D KTPIDVAKLN+Q EV+KLLEKD FL Sbjct: 310 VTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 342
>FANK1_BOVIN (Q6B858) Fibronectin type 3 and ankyrin repeat domains protein 1| (GV14) Length = 345 Score = 33.1 bits (74), Expect = 0.16 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = -2 Query: 401 VTLQNMDGKTPIDVAKLNNQDEVLKLL 321 V +++ DGKTP+ VA LNN +E+++LL Sbjct: 271 VNVKDKDGKTPLMVAVLNNHEELVQLL 297
>FANK1_MOUSE (Q9DAM9) Fibronectin type 3 and ankyrin repeat domains 1 protein| (Germ cell-specific gene 1 protein) (GSG1) Length = 344 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/27 (48%), Positives = 22/27 (81%) Frame = -2 Query: 401 VTLQNMDGKTPIDVAKLNNQDEVLKLL 321 V +++ DGKTP+ VA LNN +++++LL Sbjct: 271 VNIKDKDGKTPLMVAVLNNHEQLVQLL 297
>FANK1_RAT (Q66H07) Fibronectin type 3 and ankyrin repeat domains 1 protein| Length = 344 Score = 32.0 bits (71), Expect = 0.36 Identities = 13/27 (48%), Positives = 22/27 (81%) Frame = -2 Query: 401 VTLQNMDGKTPIDVAKLNNQDEVLKLL 321 V +++ DGKTP+ VA LNN +++++LL Sbjct: 271 VNVRDKDGKTPLMVAVLNNHEQLVQLL 297
>FANK1_HUMAN (Q8TC84) Fibronectin type 3 and ankyrin repeat domains protein 1| Length = 345 Score = 31.2 bits (69), Expect = 0.62 Identities = 13/27 (48%), Positives = 22/27 (81%) Frame = -2 Query: 401 VTLQNMDGKTPIDVAKLNNQDEVLKLL 321 V +++ +GKTP+ VA LNN +E+++LL Sbjct: 271 VNVKDRNGKTPLMVAVLNNHEELVQLL 297
>YM8B_YEAST (Q03496) Hypothetical 163.6 kDa protein in PET111-TIF11 intergenic| region Length = 1420 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = +3 Query: 45 KNDSWVQSWITLVKSTETKWTIHKSPYT 128 KN+S+VQ WI L KS K+ IH YT Sbjct: 227 KNESFVQEWIQLWKSCALKY-IHDKQYT 253
>GP158_MOUSE (Q8C419) Probable G-protein coupled receptor 158 precursor| Length = 1200 Score = 29.3 bits (64), Expect = 2.3 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -3 Query: 235 GWIVILESAFYSLCKNILPVLAGL 164 GW+V L +AFY L N++P G+ Sbjct: 280 GWLVTLSAAFYGLQPNLVPEFRGV 303
>ABF2_BACOV (Q59219) Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) (Arabinosidase| 2) Length = 514 Score = 29.3 bits (64), Expect = 2.3 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = -2 Query: 332 LKLLEKDVFL*IASLGSHEETWPSSCFTSLWHWLD 228 +K DVF + L WP CF +HW+D Sbjct: 68 IKGYRTDVFNALKDLSVPVLRWPGGCFADEYHWMD 102
>ZN326_HUMAN (Q5BKZ1) Zinc finger protein 326| Length = 582 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = -2 Query: 377 KTPIDVAKLNNQDEVLKLLEKDV 309 KT I + NNQ EV+K++EKDV Sbjct: 367 KTSIRKQQTNNQTEVVKIIEKDV 389
>ZN326_PONPY (Q5RCA4) Zinc finger protein 326| Length = 579 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = -2 Query: 377 KTPIDVAKLNNQDEVLKLLEKDV 309 KT I + NNQ EV+K++EKDV Sbjct: 367 KTSIRKQQTNNQTEVVKIIEKDV 389
>PTGDS_SHEEP (Q9XSM0) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 191 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/66 (21%), Positives = 28/66 (42%) Frame = +3 Query: 39 NSKNDSWVQSWITLVKSTETKWTIHKSPYTVTCSSNLGQSACRPANTGSIFLHNE*NADS 218 N + D ++ W T ++ + W + K C S + +A N S FL + Sbjct: 33 NFEEDKFLGRWFTSGLASNSSWFLEKRKVLSMCKSEVAPAADGGLNVTSTFLRKDQCETR 92 Query: 219 SMTIQP 236 ++ ++P Sbjct: 93 TLLLRP 98
>ASZ1_CALMO (Q2QLB5) Ankyrin repeat, SAM and basic leucine zipper| domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein) Length = 476 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLL 321 LQ DGK P ++AK N E+ LL Sbjct: 211 LQTKDGKLPSEIAKRNKHHEIFNLL 235
>ASZ1_CALJA (Q2QLG0) Ankyrin repeat, SAM and basic leucine zipper| domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein) Length = 477 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLL 321 LQ DGK P ++AK N E+ LL Sbjct: 212 LQTKDGKLPSEIAKRNKHHEIFNLL 236
>ASZ1_PONPY (Q2IBE3) Ankyrin repeat, SAM and basic leucine zipper| domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein) Length = 475 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLL 321 LQ DGK P ++AK N E+ LL Sbjct: 210 LQTKDGKMPSEIAKRNKHHEIFNLL 234
>ASZ1_PAPAN (Q8WMX7) Ankyrin repeat, SAM and basic leucine zipper| domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein) Length = 475 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLL 321 LQ DGK P ++AK N E+ LL Sbjct: 210 LQTKDGKMPSEIAKRNKHHEIFNLL 234
>ASZ1_PANTR (Q8WMX6) Ankyrin repeat, SAM and basic leucine zipper| domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein) Length = 475 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLL 321 LQ DGK P ++AK N E+ LL Sbjct: 210 LQTKDGKMPSEIAKRNKHHEIFNLL 234
>ASZ1_HUMAN (Q8WWH4) Ankyrin repeat, SAM and basic leucine zipper| domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein) Length = 475 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLL 321 LQ DGK P ++AK N E+ LL Sbjct: 210 LQTKDGKMPSEIAKRNKHHEIFNLL 234
>NU5H_NYCOV (Q5DUY0) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH| dehydrogenase subunit 5) Length = 1849 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -3 Query: 265 RHHVLHRFGIGWIVILESAFYSLCKN-ILPVLAGLQADWPRLELHVTVYGDL 113 R L+RFG W+ YSLC N LP L L P + ++++ G+L Sbjct: 1387 RTFALNRFGDLWMFTASIEIYSLCHNDALPTLFAL---LPYAQFNLSILGNL 1435
>VL3_REOVJ (P17377) Minor core protein lambda-3| Length = 1267 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +3 Query: 51 DSWVQSWITLVKSTETKWTIHKSPYTVTCSSNLGQSACR 167 D + SWI+L++ T+W + + CSS G + R Sbjct: 896 DLGMYSWISLIRPLMTRWMVANGYVSERCSSIFGNADYR 934
>VL3_REOVD (P17378) Minor core protein lambda-3| Length = 1267 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +3 Query: 51 DSWVQSWITLVKSTETKWTIHKSPYTVTCSSNLGQSACR 167 D + SWI+L++ T+W + T CS+ G + R Sbjct: 896 DLGMYSWISLIRPLMTRWMVANGYVTDRCSTVFGNADYR 934
>EHMT1_HUMAN (Q9H9B1) Histone-lysine N-methyltransferase, H3 lysine-9 specific 5| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 5) (H3-K9-HMTase 5) (Euchromatic histone-lysine N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1) (GLP1) Length = 1267 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -2 Query: 401 VTLQNMDGKTPIDVAKLNNQ 342 VTL+N +G+TP+ A LN+Q Sbjct: 934 VTLKNKEGETPLQCASLNSQ 953
>YM8M_YEAST (Q03263) Hypothetical transport protein YMR279C| Length = 540 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -3 Query: 256 VLHRFGIGWIVILESAFYSLCKNILPVLAGLQADW 152 V + FGI + L A+YS+ N+ + GL DW Sbjct: 234 VFYAFGIATFLSLLMAWYSIPNNVPTNIHGLSMDW 268
>ASZ1_HORSE (Q2QLA4) Ankyrin repeat, SAM and basic leucine zipper| domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein) Length = 475 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLL 321 LQ DGKTP ++AK N E+ L Sbjct: 210 LQTKDGKTPSEIAKRNKHLEIFNFL 234
>MODC2_BRAJA (Q89EW7) Molybdenum import ATP-binding protein modC 2 (EC 3.6.3.29)| Length = 897 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/28 (35%), Positives = 20/28 (71%) Frame = +3 Query: 318 LEQLEDLILVVELGDIDGRLPIHVLESD 401 +E+ D ++++E G + G P+H+L+SD Sbjct: 199 IERFADYLVLMERGRVVGAGPLHILQSD 226
>PLXA2_MOUSE (P70207) Plexin-A2 precursor (Plexin-2) (Plex 2)| Length = 1884 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +3 Query: 9 RHAYHFQTLRNS--KNDSWVQSWITLVKSTETKWTIHKSPYTVTCSSNLGQS 158 RH+ H +R++ N ++ W+ ++K+ + + IHK T C S + Q+ Sbjct: 1716 RHSIHDTDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKGSITDACLSVVAQT 1767
>PLXA2_HUMAN (O75051) Plexin-A2 precursor (Semaphorin receptor OCT)| Length = 1909 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +3 Query: 9 RHAYHFQTLRNS--KNDSWVQSWITLVKSTETKWTIHKSPYTVTCSSNLGQS 158 RH+ H +R++ N ++ W+ ++K+ + + IHK T C S + Q+ Sbjct: 1741 RHSIHDTDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKGSITDACLSVVAQT 1792
>ZDH13_PONPY (Q5NVB9) Probable palmitoyltransferase ZDHHC13 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 13) (DHHC-13) Length = 622 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/83 (21%), Positives = 38/83 (45%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLLEKDVFL*IASLGSHEETWPSSCFTSLWHWLDSHTR 216 +QN+ G+TP+D+A N ++ +L+ + A + ++++ LW WL Sbjct: 245 IQNVKGETPLDMALQNKNQLIIHMLKTE-----AKMRANQK-------FRLWRWLQKCE- 291 Query: 215 IGILFVV*EYTTCVSWPAGRLAE 147 LF++ + W G + + Sbjct: 292 ---LFLLLMLSVITMWAVGYILD 311
>ZDH13_MACFA (Q4R690) Probable palmitoyltransferase ZDHHC13 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 13) (DHHC-13) Length = 622 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/83 (21%), Positives = 38/83 (45%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLLEKDVFL*IASLGSHEETWPSSCFTSLWHWLDSHTR 216 +QN+ G+TP+D+A N ++ +L+ + A + ++++ LW WL Sbjct: 245 IQNVKGETPLDMALQNKNQLIIHMLKTE-----AKMRTNQK-------FRLWRWLQKCE- 291 Query: 215 IGILFVV*EYTTCVSWPAGRLAE 147 LF++ + W G + + Sbjct: 292 ---LFLLLMLSVITMWAVGYILD 311
>Y1272_METMA (Q8PXE8) UPF0245 protein MM1272| Length = 380 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = -2 Query: 380 GKTPIDVAKLNNQDEVLKLLEK 315 G TPI VAKL DEVL LE+ Sbjct: 343 GGTPISVAKLKKGDEVLVRLEE 364
>FKB59_DROME (Q9VL78) FK506-binding protein 59 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) (dFKBP59) Length = 439 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/59 (25%), Positives = 27/59 (45%) Frame = -3 Query: 205 YSLCKNILPVLAGLQADWPRLELHVTVYGDLCIVHFVSVDFTRVIQDCTQESFLELRRV 29 Y+ CKNILP + +++ V + ++ + H S D Q+C + L+ V Sbjct: 275 YTKCKNILPTTVHTNEEVKKIK--VATHSNIALCHQKSNDHFEAKQECNEVLALDKNNV 331
>PTGDS_BOVIN (O02853) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 191 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/66 (21%), Positives = 28/66 (42%) Frame = +3 Query: 39 NSKNDSWVQSWITLVKSTETKWTIHKSPYTVTCSSNLGQSACRPANTGSIFLHNE*NADS 218 N + D ++ W T ++ + W + K C S + +A N S FL + Sbjct: 33 NFEEDKFLGRWFTSGLASNSSWFLEKKKVLSMCKSVVAPAADGGLNLTSTFLRKDQCETR 92 Query: 219 SMTIQP 236 ++ ++P Sbjct: 93 TLLLRP 98
>CBS2_YEAST (P14905) Cytochrome B translational activator protein CBS2| Length = 389 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = -3 Query: 214 SAFYSLCKNILPVLAGLQADWPRLELHVTVYGDLCIVHFVSVDFTRVIQDCTQ 56 +AFY L + I + +G+ +D +LHV + DL + +++ CT+ Sbjct: 209 NAFYKLFREISRLRSGIGSDLVSFDLHVHGFQDLFFTELEKL----ILESCTE 257
>ZDH13_HUMAN (Q8IUH4) Probable palmitoyltransferase ZDHHC13 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 13) (DHHC-13) (Huntingtin-interacting protein 14-related protein) (HIP14-related protein) (Huntingtin-interacting protein HIP3RP) (Putativ Length = 622 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/83 (21%), Positives = 38/83 (45%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLLEKDVFL*IASLGSHEETWPSSCFTSLWHWLDSHTR 216 +QN+ G+TP+D+A N ++ +L+ + A + ++++ LW WL Sbjct: 245 IQNVKGETPLDMALQNKNQLIIHMLKTE-----AKMRANQK-------FRLWRWLQKCE- 291 Query: 215 IGILFVV*EYTTCVSWPAGRLAE 147 LF++ + W G + + Sbjct: 292 ---LFLLLMLSVITMWAIGYILD 311
>Y4592_METAC (Q8THC5) UPF0245 protein MA4592| Length = 380 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/29 (55%), Positives = 18/29 (62%) Frame = -2 Query: 401 VTLQNMDGKTPIDVAKLNNQDEVLKLLEK 315 + L DG TPI VAKL DEVL LE+ Sbjct: 337 IKLVGKDG-TPISVAKLEKGDEVLVRLEE 364
>SYQ_HUMAN (P47897) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 775 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/76 (27%), Positives = 31/76 (40%) Frame = -3 Query: 259 HVLHRFGIGWIVILESAFYSLCKNILPVLAGLQADWPRLELHVTVYGDLCIVHFVSVDFT 80 H+ H S+++ LC N L V +Q ++ RL LH V I+ V+ Sbjct: 450 HITHSLCTKEFQARRSSYFWLC-NALDVYCPVQWEYGRLNLHYAVVSKRKILQLVATGAV 508 Query: 79 RVIQDCTQESFLELRR 32 R D + LRR Sbjct: 509 RDWDDPRLFTLTALRR 524
>ANKR7_HUMAN (Q92527) Ankyrin repeat domain-containing protein 7| (Testis-specific protein TSA806) Length = 201 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%) Frame = -2 Query: 392 QNMDGKTPIDVAKLNNQDEVLK-LLEK 315 +N DG TP+ VA +NN +++K LLEK Sbjct: 101 KNKDGYTPLLVAVINNNPKMVKFLLEK 127
>ASZ1_BOVIN (Q8WMX8) Ankyrin repeat, SAM and basic leucine zipper| domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein) Length = 475 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLL 321 +Q DGKTP ++AK N E+ L Sbjct: 210 IQTKDGKTPSEIAKRNKHLEIFNFL 234
>BRO1_CRYNE (Q5KE13) Vacuolar protein-sorting protein BRO1 (BRO| domain-containing protein 1) Length = 957 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLLEKDVFL*IASLGSHE 276 ++ + PI + + EV KL+ D+FL + L HE Sbjct: 340 IEKLPPAAPITIQDVYGNQEVTKLIGPDIFLRLVPLAVHE 379
>HECD1_HUMAN (Q9ULT8) E3 ubiquitin-protein ligase HECTD1 (HECT domain-containing| protein 1) (E3 ligase for inhibin receptor) (EULIR) Length = 2612 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = -2 Query: 395 LQNMDGKTPIDVAKLNNQDEVLKLLE 318 L++ DGKTP+D A+ EV+ +L+ Sbjct: 455 LRDEDGKTPLDKARERGHSEVVAILQ 480
>UNG_VARV (P32988) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 218 Score = 27.3 bits (59), Expect = 8.9 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -1 Query: 63 VPKNHF*SCAEFESDTHAVYW 1 +P N++ SC E+ +HA+YW Sbjct: 117 IPWNYYLSCKLGETKSHAIYW 137
>UNG_VACCV (P04303) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 218 Score = 27.3 bits (59), Expect = 8.9 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -1 Query: 63 VPKNHF*SCAEFESDTHAVYW 1 +P N++ SC E+ +HA+YW Sbjct: 117 IPWNYYLSCKLGETKSHAIYW 137
>UNG_VACCC (P20536) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 218 Score = 27.3 bits (59), Expect = 8.9 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -1 Query: 63 VPKNHF*SCAEFESDTHAVYW 1 +P N++ SC E+ +HA+YW Sbjct: 117 IPWNYYLSCKLGETKSHAIYW 137
>UNG_VACCA (Q91UM2) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 218 Score = 27.3 bits (59), Expect = 8.9 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -1 Query: 63 VPKNHF*SCAEFESDTHAVYW 1 +P N++ SC E+ +HA+YW Sbjct: 117 IPWNYYLSCKLGETKSHAIYW 137 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,035,321 Number of Sequences: 219361 Number of extensions: 1101501 Number of successful extensions: 2572 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 2524 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2572 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
