ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart45d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF510035.1| Nicotiana tabacum ankyrin domain protein (ANK1) m... 121 2e-24
2gb|AY107770.1| Zea mays PCO087426 mRNA sequence 101 2e-18
3gb|AF352797.1|AF352797 Nicotiana tabacum ankyrin-repeat protein ... 98 3e-17
4gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 94 4e-16
5gb|AF358770.1| Oryza sativa clone Osl81 apospory-associated prot... 94 4e-16
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 94 4e-16
7dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 94 4e-16
8dbj|AK121370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
9dbj|AK098858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
10dbj|AK062078.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
11gb|AY395742.1| Vitis aestivalis putative ankyrin-repeat protein ... 90 6e-15
12gb|AY107283.1| Zea mays PCO076711 mRNA sequence 90 6e-15
13gb|AF475105.1| Triticum aestivum apomixis-associated protein mRN... 86 1e-13
14dbj|D37939.1|PENPSB31AB Pennisetum ciliare apomixis-associated m... 86 1e-13
15gb|U13149.1|PCU13149 Pennisetum ciliare possible apospory-associ... 86 1e-13
16emb|Z36546.1|PCAPOSPA3 P.ciliare (Higgins) apospory associated m... 86 1e-13
17gb|AY258007.1| Nicotiana tabacum TGB12K interacting protein 2 (T... 84 4e-13
18gb|AY258008.1| Nicotiana tabacum TGB12K interacting protein 3 (T... 80 6e-12
19ref|XM_470424.1| Oryza sativa (japonica cultivar-group), mRNA 78 2e-11
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 78 2e-11
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
22gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 78 2e-11
23dbj|AK068082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
24ref|XM_483562.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
25dbj|AK108758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
26gb|BT013193.1| Lycopersicon esculentum clone 134344R, mRNA sequence 68 2e-08
27dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
28dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
29emb|AJ234569.1|HVU234569 Hordeum vulgare genomic DNA fragment; c... 62 1e-06
30emb|AL136000.4|CNS01DVQ Human chromosome 14 DNA sequence BAC R-8... 42 1.4
31gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 5.4
32ref|XM_748346.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.4
33emb|AL451065.13| Human DNA sequence from clone RP11-274J16 on ch... 40 5.4
34emb|AL390760.25| Human DNA sequence from clone RP11-370F5 on chr... 40 5.4
35emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 5.4
36emb|CR628336.1| Legionella pneumophila str. Paris complete genome 40 5.4
37emb|BX537275.8| Zebrafish DNA sequence from clone DKEYP-120E12 i... 40 5.4
38emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 5.4
39emb|AL935040.6| Zebrafish DNA sequence from clone CH211-176L21, ... 40 5.4 
>gb|AF510035.1| Nicotiana tabacum ankyrin domain protein (ANK1) mRNA, complete cds
          Length = 1053

 Score =  121 bits (61), Expect = 2e-24
 Identities = 88/97 (90%)
 Strand = Plus / Minus

                                                                        
Query: 302  acaggaacacgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcga 361
            |||| ||||| || |||||||||||||| |||||||| | |||||||||||| ||||| |
Sbjct: 1051 acagaaacacatctttctcgagcagctttaggacctcctgctggttgttgagtttggcca 992

                                                 
Query: 362  catcgatgggcgtcttcccatccatgttttggagagt 398
            |||||||||||||||| ||||||||||||||||||||
Sbjct: 991  catcgatgggcgtctttccatccatgttttggagagt 955
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>gb|AY107770.1| Zea mays PCO087426 mRNA sequence
          Length = 1494

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                        
Query: 315  cttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgggcgt 374
            |||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 1139 cttctccagcagcttgaggacgtcatcctggttgttgagcttggccacgtcgatgggcgt 1080

                       
Query: 375  cttcccatcca 385
            |||||| ||||
Sbjct: 1079 cttcccgtcca 1069
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>gb|AF352797.1|AF352797 Nicotiana tabacum ankyrin-repeat protein HBP1 mRNA, complete cds
          Length = 1331

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 85/97 (87%)
 Strand = Plus / Minus

                                                                        
Query: 302  acaggaacacgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcga 361
            |||| ||||| || |||||||||||||| |||||||| | |||||||||||| ||||| |
Sbjct: 1140 acagaaacacatctttctcgagcagcttcaggacctcctgctggttgttgagtttggcca 1081

                                                 
Query: 362  catcgatgggcgtcttcccatccatgttttggagagt 398
            ||||||| || ||||| ||||||| ||||||||||||
Sbjct: 1080 catcgatcggtgtcttaccatccaagttttggagagt 1044
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>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0065A15, complete sequence
          Length = 168806

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                          
Query: 311    cgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgg 370
              ||||| ||||||||| |||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 151915 cgtccatctcgagcaccttgaggacctcatcctggttgttcagcttggccacctcgatgg 151856

                             
Query: 371    gcgtcttcccatcca 385
              | |||||||| ||||
Sbjct: 151855 gggtcttcccgtcca 151841
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>gb|AF358770.1| Oryza sativa clone Osl81 apospory-associated protein mRNA, partial
           cds
          Length = 710

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                       
Query: 311 cgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgg 370
           ||||| ||||||||| |||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 637 cgtccatctcgagcaccttgaggacctcatcctggttgttcagcttggccacctcgatgg 578

                          
Query: 371 gcgtcttcccatcca 385
           | |||||||| ||||
Sbjct: 577 gggtcttcccgtcca 563
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                            
Query: 311      cgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgg 370
                ||||| ||||||||| |||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 19668840 cgtccatctcgagcaccttgaggacctcatcctggttgttcagcttggccacctcgatgg 19668781

                               
Query: 371      gcgtcttcccatcca 385
                | |||||||| ||||
Sbjct: 19668780 gggtcttcccgtcca 19668766
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>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0450E05
          Length = 176553

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                         
Query: 311   cgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgg 370
             ||||| ||||||||| |||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 14526 cgtccatctcgagcaccttgaggacctcatcctggttgttcagcttggccacctcgatgg 14467

                            
Query: 371   gcgtcttcccatcca 385
             | |||||||| ||||
Sbjct: 14466 gggtcttcccgtcca 14452
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>dbj|AK121370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125M12, full
            insert sequence
          Length = 1529

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                        
Query: 311  cgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgg 370
            ||||| ||||||||| |||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 1213 cgtccatctcgagcaccttgaggacctcatcctggttgttcagcttggccacctcgatgg 1154

                           
Query: 371  gcgtcttcccatcca 385
            | |||||||| ||||
Sbjct: 1153 gggtcttcccgtcca 1139
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>dbj|AK098858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M21, full
            insert sequence
          Length = 1475

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                        
Query: 311  cgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgg 370
            ||||| ||||||||| |||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 1213 cgtccatctcgagcaccttgaggacctcatcctggttgttcagcttggccacctcgatgg 1154

                           
Query: 371  gcgtcttcccatcca 385
            | |||||||| ||||
Sbjct: 1153 gggtcttcccgtcca 1139
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>dbj|AK062078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F07, full
            insert sequence
          Length = 1418

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                        
Query: 311  cgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgg 370
            ||||| ||||||||| |||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 1218 cgtccatctcgagcaccttgaggacctcatcctggttgttcagcttggccacctcgatgg 1159

                           
Query: 371  gcgtcttcccatcca 385
            | |||||||| ||||
Sbjct: 1158 gggtcttcccgtcca 1144
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>gb|AY395742.1| Vitis aestivalis putative ankyrin-repeat protein mRNA, complete cds
          Length = 1065

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                        
Query: 313  tccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgggc 372
            |||||||| |||||||| || ||||||| ||||||||| || ||||| || ||||| || 
Sbjct: 1052 tccttctcaagcagcttcagtacctcatgctggttgttcagtttggccacgtcgatcggt 993

                                         
Query: 373  gtcttcccatccatgttttggagagtgac 401
            ||||| |||||||||||||||||||||||
Sbjct: 992  gtcttgccatccatgttttggagagtgac 964
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>gb|AY107283.1| Zea mays PCO076711 mRNA sequence
          Length = 1604

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 75/85 (88%)
 Strand = Plus / Minus

                                                                        
Query: 311  cgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgg 370
            ||||||||||||||| ||| || ||||| |||||||| || ||||||||||||||||| |
Sbjct: 1279 cgtccttctcgagcaacttcagaacctcgtcctggttattcagcttggcgacatcgatag 1220

                                     
Query: 371  gcgtcttcccatccatgttttggag 395
            | |||||||| |||| |||||||||
Sbjct: 1219 gtgtcttcccgtccaggttttggag 1195
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>gb|AF475105.1| Triticum aestivum apomixis-associated protein mRNA, partial cds
          Length = 435

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                       
Query: 304 aggaacacgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgaca 363
           ||||||||||||| ||| |||||||| |  |||||  ||||| ||||||||||||| || 
Sbjct: 431 aggaacacgtcctgctcaagcagcttcaccacctcgccctggctgttgagcttggccacc 372

                                                  
Query: 364 tcgatgggcgtcttcccatccatgttttggagagtgaca 402
           |||||||| |||||||||||||  |||||||| ||||||
Sbjct: 371 tcgatgggggtcttcccatccagattttggagcgtgaca 333
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>dbj|D37939.1|PENPSB31AB Pennisetum ciliare apomixis-associated mRNA, clone:psb3-1a
          Length = 876

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 311 cgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgg 370
           |||||||||| |||| |||||| ||||||||||| ||||||||| |||| || |||||||
Sbjct: 622 cgtccttctccagcaacttgagaacctcatcctgattgttgagcctggcaacttcgatgg 563

                          
Query: 371 gcgtcttcccatcca 385
           | |||||||||||||
Sbjct: 562 gggtcttcccatcca 548
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>gb|U13149.1|PCU13149 Pennisetum ciliare possible apospory-associated mRNA clone pSUB
           3-1a, partial cds
          Length = 876

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 311 cgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgg 370
           |||||||||| |||| |||||| ||||||||||| ||||||||| |||| || |||||||
Sbjct: 622 cgtccttctccagcaacttgagaacctcatcctgattgttgagcctggcaacttcgatgg 563

                          
Query: 371 gcgtcttcccatcca 385
           | |||||||||||||
Sbjct: 562 gggtcttcccatcca 548
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>emb|Z36546.1|PCAPOSPA3 P.ciliare (Higgins) apospory associated mRNA, 876bp
          Length = 876

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 311 cgtccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgg 370
           |||||||||| |||| |||||| ||||||||||| ||||||||| |||| || |||||||
Sbjct: 622 cgtccttctccagcaacttgagaacctcatcctgattgttgagcctggcaacttcgatgg 563

                          
Query: 371 gcgtcttcccatcca 385
           | |||||||||||||
Sbjct: 562 gggtcttcccatcca 548
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>gb|AY258007.1| Nicotiana tabacum TGB12K interacting protein 2 (TIP2) mRNA, complete
            cds
          Length = 1050

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                        
Query: 313  tccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgggc 372
            ||||||||||||||||| |||||||| | |||||| ||||| ||||| ||||| || || 
Sbjct: 1037 tccttctcgagcagctttaggacctcgttctggttattgagtttggcaacatctattggt 978

                                      
Query: 373  gtcttcccatccatgttttggagagt 398
            ||||||||||||| |||||| |||||
Sbjct: 977  gtcttcccatccaagttttgaagagt 952
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>gb|AY258008.1| Nicotiana tabacum TGB12K interacting protein 3 (TIP3) mRNA, complete
            cds
          Length = 1047

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                        
Query: 313  tccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgggc 372
            ||||||||||||||||| |||||||| | |||||| ||||| ||||| ||||| || || 
Sbjct: 1034 tccttctcgagcagctttaggacctcgttctggttattgagtttggcaacatctattggt 975

                                
Query: 373  gtcttcccatccatgttttg 392
            ||||||||||||| ||||||
Sbjct: 974  gtcttcccatccaagttttg 955
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>ref|XM_470424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1369

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                        
Query: 315  cttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgggcgt 374
            ||||||||||||||||||||| || |||||||||||||| || || || ||||||| |||
Sbjct: 1038 cttctcgagcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgt 979

                       
Query: 375  cttcccatcca 385
            |||||| ||||
Sbjct: 978  cttcccgtcca 968
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                            
Query: 315      cttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgggcgt 374
                ||||||||||||||||||||| || |||||||||||||| || || || ||||||| |||
Sbjct: 35559918 cttctcgagcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgt 35559859

                           
Query: 375      cttcccatcca 385
                |||||| ||||
Sbjct: 35559858 cttcccgtcca 35559848
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                            
Query: 315      cttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgggcgt 374
                ||||||||||||||||||||| || |||||||||||||| || || || ||||||| |||
Sbjct: 35649990 cttctcgagcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgt 35649931

                           
Query: 375      cttcccatcca 385
                |||||| ||||
Sbjct: 35649930 cttcccgtcca 35649920
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>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
             sequence
          Length = 145290

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 315   cttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgggcgt 374
             ||||||||||||||||||||| || |||||||||||||| || || || ||||||| |||
Sbjct: 92881 cttctcgagcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgt 92822

                        
Query: 375   cttcccatcca 385
             |||||| ||||
Sbjct: 92821 cttcccgtcca 92811
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>dbj|AK068082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130D01, full
            insert sequence
          Length = 1360

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                        
Query: 315  cttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgggcgt 374
            ||||||||||||||||||||| || |||||||||||||| || || || ||||||| |||
Sbjct: 1077 cttctcgagcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgt 1018

                       
Query: 375  cttcccatcca 385
            |||||| ||||
Sbjct: 1017 cttcccgtcca 1007
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>ref|XM_483562.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1306

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                        
Query: 295  gcgatttacaggaacacgtccttctcgagcagcttgaggacctcatcctggttgttgagc 354
            ||||| ||||||||  | ||||| || |||| | |||| ||||| |||||||||||||||
Sbjct: 1054 gcgatctacaggaaggcatccttttccagcaacctgagaacctcgtcctggttgttgagc 995

                                                            
Query: 355  ttggcgacatcgatgggcgtcttcccatccatgttttggagagtgaca 402
            || || || || |||| |||||| ||||||||||||| ||| ||||||
Sbjct: 994  ttcgcaacgtcaatggccgtcttgccatccatgttttcgagggtgaca 947
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>dbj|AK108758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G03, full
            insert sequence
          Length = 1292

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                        
Query: 295  gcgatttacaggaacacgtccttctcgagcagcttgaggacctcatcctggttgttgagc 354
            ||||| ||||||||  | ||||| || |||| | |||| ||||| |||||||||||||||
Sbjct: 1040 gcgatctacaggaaggcatccttttccagcaacctgagaacctcgtcctggttgttgagc 981

                                                            
Query: 355  ttggcgacatcgatgggcgtcttcccatccatgttttggagagtgaca 402
            || || || || |||| |||||| ||||||||||||| ||| ||||||
Sbjct: 980  ttcgcaacgtcaatggccgtcttgccatccatgttttcgagggtgaca 933
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>gb|BT013193.1| Lycopersicon esculentum clone 134344R, mRNA sequence
          Length = 1379

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                        
Query: 313  tccttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgggc 372
            |||||||| |||||||| ||||| || | |||||||||||| ||||| ||||| || |||
Sbjct: 1133 tccttctcaagcagctttaggacatcctgctggttgttgagtttggcaacatcaattggc 1074

                                      
Query: 373  gtcttcccatccatgttttggagagt 398
            ||||| || |||| |||||| |||||
Sbjct: 1073 gtctttccgtccaagttttgaagagt 1048
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 81/97 (83%)
 Strand = Plus / Minus

                                                                            
Query: 295      gcgatttacaggaacacgtccttctcgagcagcttgaggacctcatcctggttgttgagc 354
                ||||| ||||||||  | ||||| || |||| | |||| ||||| |||||||||||||||
Sbjct: 26979197 gcgatctacaggaaggcatccttttccagcaacctgagaacctcgtcctggttgttgagc 26979138

                                                     
Query: 355      ttggcgacatcgatgggcgtcttcccatccatgtttt 391
                || || || || |||| |||||| |||||||||||||
Sbjct: 26979137 ttcgcaacgtcaatggccgtcttgccatccatgtttt 26979101
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>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0666G10
          Length = 150761

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 81/97 (83%)
 Strand = Plus / Minus

                                                                         
Query: 295   gcgatttacaggaacacgtccttctcgagcagcttgaggacctcatcctggttgttgagc 354
             ||||| ||||||||  | ||||| || |||| | |||| ||||| |||||||||||||||
Sbjct: 80597 gcgatctacaggaaggcatccttttccagcaacctgagaacctcgtcctggttgttgagc 80538

                                                  
Query: 355   ttggcgacatcgatgggcgtcttcccatccatgtttt 391
             || || || || |||| |||||| |||||||||||||
Sbjct: 80537 ttcgcaacgtcaatggccgtcttgccatccatgtttt 80501
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>emb|AJ234569.1|HVU234569 Hordeum vulgare genomic DNA fragment; clone MWG0813.rev
          Length = 107

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                       
Query: 315 cttctcgagcagcttgaggacctcatcctggttgttgagcttggcgacatcgatgggcgt 374
           |||||| ||||||||||| ||||| |||||| |||||||| | || || ||||||| |||
Sbjct: 75  cttctccagcagcttgagcacctcctcctggctgttgagcctcgccacgtcgatggccgt 16

                      
Query: 375 cttcccatcca 385
           |||||| ||||
Sbjct: 15  cttcccgtcca 5
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>emb|AL136000.4|CNS01DVQ Human chromosome 14 DNA sequence BAC R-860P2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 201587

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 84    aaatcaacagaaacaaagtggacga 108
             ||||| |||||||||||||||||||
Sbjct: 49007 aaatctacagaaacaaagtggacga 48983
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 246     cgatgtaaaacatgatgacg 265
               ||||||||||||||||||||
Sbjct: 3013429 cgatgtaaaacatgatgacg 3013410
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>ref|XM_748346.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g12120)
           partial mRNA
          Length = 519

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 381 atccatgttttggagagtga 400
           ||||||||||||||||||||
Sbjct: 340 atccatgttttggagagtga 359
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>emb|AL451065.13| Human DNA sequence from clone RP11-274J16 on chromosome 9 Contains the 3'
              end of the FGD3 gene for FGD1 family, member 3 (FLJ00004),
              a novel gene, a novel gene (MGC26847), a novel gene
              (MGC11115), the NINJ1 gene for ninjurin 1 and three CpG
              islands, complete sequence
          Length = 163689

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     caacagaaacaaagtggacg 107
              ||||||||||||||||||||
Sbjct: 157062 caacagaaacaaagtggacg 157081
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>emb|AL390760.25| Human DNA sequence from clone RP11-370F5 on chromosome 9 Contains the
             3' emd of novel gene (MGC11115), the NINJ1 gene for
             ninjurin 1, a novel gene, the 5' end of the PRKWNK2 gene
             for protein kinase, lysine deficient 2 (WNK2, NY-CO-43,
             SDCCAG43, P/OKcl.13) and two CpG islands, complete
             sequence
          Length = 175797

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    caacagaaacaaagtggacg 107
             ||||||||||||||||||||
Sbjct: 39103 caacagaaacaaagtggacg 39122
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 246     cgatgtaaaacatgatgacg 265
               ||||||||||||||||||||
Sbjct: 2960248 cgatgtaaaacatgatgacg 2960229
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 246     cgatgtaaaacatgatgacg 265
               ||||||||||||||||||||
Sbjct: 3100509 cgatgtaaaacatgatgacg 3100490
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>emb|BX537275.8| Zebrafish DNA sequence from clone DKEYP-120E12 in linkage group 11,
             complete sequence
          Length = 173631

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    cttggattactctagtgaaa 86
             ||||||||||||||||||||
Sbjct: 87398 cttggattactctagtgaaa 87417
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 347     tgttgagcttggcgacatcgatgg 370
               |||||||||| |||||||||||||
Sbjct: 2380325 tgttgagcttcgcgacatcgatgg 2380302
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>emb|AL935040.6| Zebrafish DNA sequence from clone CH211-176L21, complete sequence
          Length = 159468

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    cttggattactctagtgaaa 86
             ||||||||||||||||||||
Sbjct: 88994 cttggattactctagtgaaa 89013


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,034,349
Number of Sequences: 3902068
Number of extensions: 3034349
Number of successful extensions: 57409
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57295
Number of HSP's gapped (non-prelim): 114
length of query: 402
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 380
effective length of database: 17,147,199,772
effective search space: 6515935913360
effective search space used: 6515935913360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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