Clone Name | rbart45d06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SCD1_SCHPO (P40995) Rho guanine nucleotide exchange factor scd1 | 29 | 3.9 | 2 | IGF1R_XENLA (O73798) Insulin-like growth factor 1 receptor precu... | 28 | 8.8 |
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>SCD1_SCHPO (P40995) Rho guanine nucleotide exchange factor scd1| Length = 872 Score = 28.9 bits (63), Expect = 3.9 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 Query: 25 MKTQAHTPAVPIYNRSISRTS 87 +++ A TPA P+YNRS S+TS Sbjct: 557 IRSAASTPANPVYNRSSSQTS 577
>IGF1R_XENLA (O73798) Insulin-like growth factor 1 receptor precursor (EC| 2.7.10.1) (xIGF-1R) (xIGFR) [Contains: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 receptor beta chain] Length = 1358 Score = 27.7 bits (60), Expect = 8.8 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = +1 Query: 1 GNKSKNILMKTQAHTPAVPIYNRSISRTSIFGRTK**TLNKWTTPSVP 144 G KSK I M+T A P++P S S +S + KW PS+P Sbjct: 590 GAKSKIIYMRTDAAVPSIPQDMISASNSSSQ------LVVKWNPPSLP 631 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,972,518 Number of Sequences: 219361 Number of extensions: 416569 Number of successful extensions: 861 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 851 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 861 length of database: 80,573,946 effective HSP length: 36 effective length of database: 72,676,950 effective search space used: 1744246800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)