ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart45d01 |
|---|---|
| Clone Library Name | barley_pub |
>P1_ARATH (Q39172) Probable NADP-dependent oxidoreductase P1 (EC 1.3.1.74)| Length = 345 Score = 105 bits (261), Expect = 6e-23 Identities = 50/89 (56%), Positives = 67/89 (75%) Frame = -3 Query: 417 ISQYNLTAGEKEADVGVRNMTSLVAKRVRMQGFIEPDHKHLYPEYRAWVMPHIKEGRVVY 238 ISQYNL E GV N+++++ KR+R+QGF+ D Y ++ +V+PHI+EG++ Y Sbjct: 257 ISQYNL-----ENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITY 311 Query: 237 VEDVADGLEAAPGALIGLFHGRNVGKQVV 151 VEDVADGLE AP AL+GLFHG+NVGKQVV Sbjct: 312 VEDVADGLEKAPEALVGLFHGKNVGKQVV 340
>P2_ARATH (Q39173) Probable NADP-dependent oxidoreductase P2 (EC 1.3.1.74)| Length = 343 Score = 105 bits (261), Expect = 6e-23 Identities = 51/89 (57%), Positives = 66/89 (74%) Frame = -3 Query: 417 ISQYNLTAGEKEADVGVRNMTSLVAKRVRMQGFIEPDHKHLYPEYRAWVMPHIKEGRVVY 238 ISQYNL E GV N+++++ KR+R+QGF+ D YP++ V+P IKEG++ Y Sbjct: 255 ISQYNL-----ENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITY 309 Query: 237 VEDVADGLEAAPGALIGLFHGRNVGKQVV 151 VEDVADGLE AP AL+GLFHG+NVGKQVV Sbjct: 310 VEDVADGLEKAPEALVGLFHGKNVGKQVV 338
>YNCB_ECOLI (P76113) Putative NADP-dependent oxidoreductase yncB (EC 1.-.-.-)| Length = 353 Score = 63.5 bits (153), Expect = 2e-10 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Frame = -3 Query: 417 ISQYNLTAGEKEADVGVRNMTSLVAKRVRMQGFI-EPDHKHLYPEYRAWVMPHIKEGRVV 241 +S YN T D M +++ KR+R+QGFI D+ H E++ + +KE ++ Sbjct: 258 VSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIHEFQREMGQWVKEDKIH 317 Query: 240 YVEDVADGLEAAPGALIGLFHGRNVGKQVVKLTTPD 133 Y E++ DGLE AP IGL G+N GK V+++ D Sbjct: 318 YREEITDGLENAPQTFIGLLKGKNFGKVVIRVAGDD 353
>LTB4D_RAT (P97584) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (Dithiolethione-inducible gene 1 protein) (D3T-inducible gene 1 protein) (DIG-1) Length = 329 Score = 42.4 bits (98), Expect = 5e-04 Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%) Frame = -3 Query: 417 ISQYNLTAGEKEADVGVRNMTSLVAKRVRMQGFIEPDHK-HLYPEYRAWVMPHIKEGRVV 241 ISQYN T + ++ +++RM+GFI + + + +M + EG++ Sbjct: 242 ISQYNRTGPCPPGP----SPEVIIYQQLRMEGFIVTRWQGEVRQKALTDLMNWVSEGKIR 297 Query: 240 YVEDVADGLEAAPGALIGLFHGRNVGKQVVK 148 Y E + +G E P A +G+ G N+GK +VK Sbjct: 298 YHEYITEGFEKMPAAFMGMLKGDNLGKTIVK 328
>LTB4D_MOUSE (Q91YR9) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 41.6 bits (96), Expect = 8e-04 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Frame = -3 Query: 417 ISQYNLTAGEKEADVGVRNMTSLVAKRVRMQGFI------EPDHKHLYPEYRAWVMPHIK 256 ISQYN T + ++ +++RM+GFI E K L E WV Sbjct: 242 ISQYNRTGPCPQGPAP----EVVIYQQLRMEGFIVNRWQGEVRQKAL-TELMNWV----S 292 Query: 255 EGRVVYVEDVADGLEAAPGALIGLFHGRNVGKQVVK 148 EG+V E V +G E P A +G+ G N+GK +VK Sbjct: 293 EGKVQCHEYVTEGFEKMPAAFMGMLKGENLGKTIVK 328
>LTB4D_CAVPO (Q9EQZ5) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (LTB4) (12-HD) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (PGR) Length = 329 Score = 40.4 bits (93), Expect = 0.002 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 5/73 (6%) Frame = -3 Query: 354 SLVAKRVRMQGFI----EPD-HKHLYPEYRAWVMPHIKEGRVVYVEDVADGLEAAPGALI 190 S++ K++R++GFI + D + + WV+ EG++ Y E V G E P A I Sbjct: 259 SIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVL----EGKIQYHEHVTKGFENMPAAFI 314 Query: 189 GLFHGRNVGKQVV 151 + +G N+GK VV Sbjct: 315 EMLNGANLGKAVV 327
>LTB4D_PIG (Q29073) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 40.0 bits (92), Expect = 0.002 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -3 Query: 261 IKEGRVVYVEDVADGLEAAPGALIGLFHGRNVGKQVVK 148 + EG++ Y E + +G E P A +G+ G N+GK +VK Sbjct: 291 VSEGKIQYHEHITEGFENMPAAFMGMLKGENLGKAIVK 328
>LTB4D_RABIT (Q28719) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (ADRAB-F) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 349 Score = 39.3 bits (90), Expect = 0.004 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%) Frame = -3 Query: 354 SLVAKRVRMQGFI------EPDHKHLYPEYRAWVMPHIKEGRVVYVEDVADGLEAAPGAL 193 S++ + +RM+GFI E K L E WV+ EG++ Y E V +G E P A Sbjct: 259 SVLYQEIRMEGFIFNRWKGEVGQKAL-KELLTWVL----EGKIQYREFVIEGFENMPAAF 313 Query: 192 IGLFHGRNVGK 160 + + G NVGK Sbjct: 314 MRMLKGENVGK 324
>QOR_LEIAM (P42865) Probable quinone oxidoreductase (EC 1.6.5.5)| (NADPH:quinone reductase) (P36) Length = 340 Score = 38.5 bits (88), Expect = 0.007 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -3 Query: 351 LVAKRVRMQGFIEPDHKHLYPEYRAWVMPHIKEGRVVYVED--VADGLEAAPGALIGLFH 178 L+ K + GF P + P+Y A ++ ++K G+V D V GL + A+ L+ Sbjct: 269 LLVKSASLNGFFLPQFHDVIPKYMANLLQYLKAGQVKLFVDKKVFHGLSSVADAVDHLYS 328 Query: 177 GRNVGKQVVKL 145 G N GK +V++ Sbjct: 329 GANYGKVLVEI 339
>LTB4D_HUMAN (Q14914) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 38.1 bits (87), Expect = 0.009 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = -3 Query: 276 WVMPHIKEGRVVYVEDVADGLEAAPGALIGLFHGRNVGKQVVK 148 WV+ EG++ Y E + +G E P A +G+ G N+GK +VK Sbjct: 290 WVL----EGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 328
>YNN4_YEAST (P53912) Hypothetical 41.2 kDa protein in FPR1-TOM22 intergenic| region Length = 376 Score = 32.0 bits (71), Expect = 0.61 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -3 Query: 315 EPDHKHLYPEYRAWVMPHIKEGRV--VYVEDVADGLEAAPGALIGLFHGRNVGKQVV 151 +P++K ++ ++ P I +G + + V+ +GL+ P L + HGRN G+++V Sbjct: 316 DPEYKEAAIKFIKFINPKINDGEIHHIPVKVYKNGLDDIPQLLDDIKHGRNSGEKLV 372
>ZADH1_MOUSE (Q8VDQ1) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 31.6 bits (70), Expect = 0.80 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = -3 Query: 258 KEGRVVYVEDVADGLEAAPGALIGLFHGRNVGKQVV 151 KEG++ E VA GLE A + G NVGKQ+V Sbjct: 308 KEGKLKVKETVAKGLENMGVAFQSMMTGGNVGKQIV 343
>ZADH1_PONPY (Q5R806) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 31.2 bits (69), Expect = 1.0 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -3 Query: 258 KEGRVVYVEDVADGLEAAPGALIGLFHGRNVGKQVV 151 KEG++ E V +GLE A + G N+GKQ+V Sbjct: 308 KEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIV 343
>ZADH1_HUMAN (Q8N8N7) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 31.2 bits (69), Expect = 1.0 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -3 Query: 258 KEGRVVYVEDVADGLEAAPGALIGLFHGRNVGKQVV 151 KEG++ E V +GLE A + G N+GKQ+V Sbjct: 308 KEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIV 343
>NEUM_FELCA (Q6S9D9) Neuromodulin (Axonal membrane protein GAP-43)| (Growth-associated protein 43) Length = 242 Score = 30.8 bits (68), Expect = 1.4 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -2 Query: 349 RGQAGPDAGVHRARPQAPLPGVQGVGDA 266 +G+ PDA +A PQAP+P + G A Sbjct: 114 KGEGTPDAATEQAAPQAPVPSEEKAGSA 141
>NEUM_BOVIN (P06836) Neuromodulin (Axonal membrane protein GAP-43)| (Growth-associated protein 43) (Calmodulin-binding protein P-57) Length = 239 Score = 30.8 bits (68), Expect = 1.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -2 Query: 349 RGQAGPDAGVHRARPQAPLPGVQGVGDA 266 +G+ PDA +A PQAP P + G A Sbjct: 112 KGEGAPDAATEQAAPQAPAPSEEKAGSA 139
>KGUA_THEMA (Q9X215) Guanylate kinase (EC 2.7.4.8) (GMP kinase)| Length = 207 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = -3 Query: 342 KRVRMQGFIE--PDHKHLYPEYRAWVMPHIKEGRVVYVE 232 KRV F+E H HLY R++V HI EG+ V ++ Sbjct: 61 KRVERGEFLEWARVHGHLYGTLRSFVESHINEGKDVVLD 99
>ZADH2_HUMAN (Q8N4Q0) Zinc-binding alcohol dehydrogenase domain-containing| protein 2 (EC 1.-.-.-) Length = 377 Score = 28.1 bits (61), Expect = 8.8 Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 12/103 (11%) Frame = -3 Query: 417 ISQYNLTAGEKEADVGVRNMTSLVAKRVRMQGFIEPDHKHLYPEYRAWVMPHIKE----G 250 IS Y G G L+ K +QGF H +Y+A M H+ E G Sbjct: 272 ISGYQTPTGLSPVKAGTLP-AKLLKKSASVQGFFL---NHYLSKYQA-AMSHLLEMCVSG 326 Query: 249 RVVYVEDVAD--------GLEAAPGALIGLFHGRNVGKQVVKL 145 +V D+ D GLE+ A+ ++ G+N GK VV+L Sbjct: 327 DLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 369
>COAE_BACHD (Q9K857) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 201 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -2 Query: 364 QHDLPRGQAGPDAGVHRARPQAPLPGVQGVGDA 266 Q + R QAG D +HR R Q PL + DA Sbjct: 140 QRLMNRDQAGKDDAIHRIRSQRPLESKRDRADA 172 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,295,804 Number of Sequences: 219361 Number of extensions: 670966 Number of successful extensions: 2324 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2291 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2323 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
