ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart45c09 |
|---|---|
| Clone Library Name | barley_pub |
>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 126 bits (317), Expect = 2e-29 Identities = 58/75 (77%), Positives = 68/75 (90%) Frame = -2 Query: 419 GDNVGETVLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVAD 240 GDNVGETVLFGDNDPA++KPKFGTYW+K+GKV+G FLEGG+ DEN+AIAKVARA+P V D Sbjct: 359 GDNVGETVLFGDNDPASSKPKFGTYWIKEGKVVGAFLEGGTPDENKAIAKVARAKPAVED 418 Query: 239 VEALAKEGLDFATKI 195 V LA+EGL FA+KI Sbjct: 419 VNQLAEEGLSFASKI 433
>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic| isoform 1 (EC 1.6.5.4) (MDAR 1) Length = 441 Score = 119 bits (297), Expect = 4e-27 Identities = 54/74 (72%), Positives = 66/74 (89%) Frame = -2 Query: 419 GDNVGETVLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVAD 240 G+NVGE+VLFGDNDP + KPKFGTYWVKDGKV+GVFLEGG+ +E++AIAKVARAQP V Sbjct: 362 GENVGESVLFGDNDPKSPKPKFGTYWVKDGKVVGVFLEGGTQEEHKAIAKVARAQPSVES 421 Query: 239 VEALAKEGLDFATK 198 ++ L++EGL FATK Sbjct: 422 LDVLSEEGLSFATK 435
>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic| isoform 4 (EC 1.6.5.4) (MDAR 4) Length = 435 Score = 116 bits (290), Expect = 2e-26 Identities = 53/75 (70%), Positives = 63/75 (84%) Frame = -2 Query: 419 GDNVGETVLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVAD 240 GDNVGE+VLFGDNDP + KPKFG+YW+K+ KV+G FLEGGS +EN AIAK+ARAQP V Sbjct: 361 GDNVGESVLFGDNDPESPKPKFGSYWIKERKVVGAFLEGGSPEENNAIAKLARAQPSVES 420 Query: 239 VEALAKEGLDFATKI 195 +E L+KEGL FAT I Sbjct: 421 LEVLSKEGLSFATNI 435
>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 106 bits (265), Expect = 2e-23 Identities = 50/75 (66%), Positives = 62/75 (82%) Frame = -2 Query: 419 GDNVGETVLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVAD 240 GDNVGETVLFGD DP +A KFG YW+KDGK++G FLE GS +EN+AIAKVA+ QPP A Sbjct: 360 GDNVGETVLFGDADPNSATHKFGQYWIKDGKIVGAFLESGSPEENKAIAKVAKVQPP-AT 418 Query: 239 VEALAKEGLDFATKI 195 ++ LA+EG+ FA+KI Sbjct: 419 LDQLAQEGISFASKI 433
>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC| 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) Length = 434 Score = 105 bits (263), Expect = 3e-23 Identities = 48/75 (64%), Positives = 59/75 (78%) Frame = -2 Query: 419 GDNVGETVLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVAD 240 GDNVG+ VLFGDN P +A KFG+YW+KDGKV+G FLE GS +EN+AIAKVAR QP V Sbjct: 360 GDNVGDAVLFGDNSPDSATHKFGSYWIKDGKVVGAFLESGSPEENKAIAKVARIQPSVES 419 Query: 239 VEALAKEGLDFATKI 195 + L KEG+ FA+K+ Sbjct: 420 SDLLLKEGISFASKV 434
>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic| isoform 3 (EC 1.6.5.4) (MDAR 3) Length = 434 Score = 103 bits (258), Expect = 1e-22 Identities = 44/75 (58%), Positives = 61/75 (81%) Frame = -2 Query: 419 GDNVGETVLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVAD 240 GDNVG++VLFGD++P+ KP+FG YWV+ GKV+G F+EGGS DEN+A+AKVA+A+P Sbjct: 360 GDNVGDSVLFGDSNPSNPKPRFGAYWVQGGKVVGAFMEGGSGDENKALAKVAKARPSAES 419 Query: 239 VEALAKEGLDFATKI 195 ++ L K+G+ FA KI Sbjct: 420 LDELVKQGISFAAKI 434
>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)| (MDAR fruit) (Ascorbate free radical reductase fruit) (AFR reductase fruit) (Fragments) Length = 166 Score = 68.2 bits (165), Expect = 8e-12 Identities = 39/66 (59%), Positives = 44/66 (66%) Frame = -2 Query: 419 GDNVGETVLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVAD 240 GDNVGETVLF DN FGTYW+ KV+GVFLEGG+ DE KVAR QPPV Sbjct: 116 GDNVGETVLFPDN--------FGTYWI---KVVGVFLEGGTPDE----YKVARVQPPVES 160 Query: 239 VEALAK 222 ++ LAK Sbjct: 161 LDQLAK 166
>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic| isoform 2 (EC 1.6.5.4) (MDAR 2) Length = 488 Score = 63.2 bits (152), Expect = 2e-10 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%) Frame = -2 Query: 419 GDNVGETVLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVA- 243 GD G+ V FG+ + + FG YWVK G ++G FLEGG+ +E + I+K + +P V Sbjct: 356 GDPTGDVVHFGEYEDGKS---FGAYWVKKGHLVGSFLEGGTKEEYETISKATQLKPAVTI 412 Query: 242 DVEALAKEGLDFA 204 D+E L +EGL FA Sbjct: 413 DLEELEREGLGFA 425
>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC| 1.6.5.4) (MDAR) Length = 493 Score = 58.5 bits (140), Expect = 6e-09 Identities = 30/75 (40%), Positives = 46/75 (61%) Frame = -2 Query: 419 GDNVGETVLFGDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQPPVAD 240 GDNVGETV G+ DP K T+W++ G++ GV +E GS +E Q + K+AR+QP V Sbjct: 417 GDNVGETVEVGNFDP-----KIATFWIESGRLKGVLVESGSPEEFQLLPKLARSQPLVDK 471 Query: 239 VEALAKEGLDFATKI 195 + + ++ A +I Sbjct: 472 AKLASASSVEEALEI 486
>K6PP_MOUSE (Q9WUA3) 6-phosphofructokinase type C (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme C) (PFK-C) Length = 784 Score = 30.4 bits (67), Expect = 1.8 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -2 Query: 386 DNDPAAAKPKFGTYWVKDGKVIGVFLEGGSAD-ENQAIAKVAR 261 D+ ++A PK+ + DGK IGV GG A N A+ V R Sbjct: 5 DSSSSSAYPKYLEHLSGDGKAIGVLTSGGDAQGMNAAVRAVVR 47
>ALG14_ASPFU (Q4WNB5) UDP-N-acetylglucosamine transferase subunit alg14 (EC| 2.4.1.-) (Asparagine linked glycosylation protein 14) Length = 228 Score = 30.4 bits (67), Expect = 1.8 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -2 Query: 389 GDNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVARAQ 255 GDN AA +F T W+K + G ++ E+ A+ V RA+ Sbjct: 25 GDNFSAARAVEFETEWLKQSPKLSFPANGSNSTESYAVVTVPRAR 69
>TLR2_CANFA (Q689D1) Toll-like receptor 2 precursor (CD282 antigen)| Length = 785 Score = 29.3 bits (64), Expect = 3.9 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +2 Query: 359 WAWPQLGRCPRTAPSRQRC 415 WAW Q R PR APSR C Sbjct: 623 WAWLQAKRKPRKAPSRDVC 641
>TLR2_HUMAN (O60603) Toll-like receptor 2 precursor (Toll/interleukin 1| receptor-like protein 4) (CD282 antigen) Length = 784 Score = 29.3 bits (64), Expect = 3.9 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +2 Query: 359 WAWPQLGRCPRTAPSRQRC 415 WAW Q R PR APSR C Sbjct: 622 WAWLQAKRKPRKAPSRNIC 640
>6PGL_PSEAE (Q9X2N2) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)| Length = 238 Score = 29.3 bits (64), Expect = 3.9 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = -2 Query: 311 LEGGSADENQAIAKVARAQPPVADVEALAKEGLDFA 204 L A++ QA+ V+ + PVA +EAL++E LD++ Sbjct: 35 LRSALAEQGQALLVVSGGRSPVAFLEALSEEPLDWS 70
>CP061_MOUSE (Q8K199) C16orf61 protein homolog| Length = 79 Score = 28.9 bits (63), Expect = 5.2 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 8/46 (17%) Frame = +3 Query: 30 LNLLKSCHS--------GHSNTIKLQKEKKKSNHVSELGTRKHRQG 143 +NLLK CH GH N + + K N SE TR G Sbjct: 18 INLLKECHKNHNILKFFGHCNDLDREMRKCLKNEYSERRTRSREHG 63
>TLR2_MACFA (Q95M53) Toll-like receptor 2 precursor (CD282 antigen)| Length = 784 Score = 28.1 bits (61), Expect = 8.8 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +2 Query: 359 WAWPQLGRCPRTAPSRQRC 415 WAW Q R PR AP+R C Sbjct: 622 WAWLQAKRKPRKAPNRDIC 640
>PRP4B_MOUSE (Q61136) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)| (PRP4 pre-mRNA-processing factor 4 homolog) (Pre-mRNA protein kinase) Length = 1007 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +3 Query: 51 HSGHSNTIKLQKEK-KKSNHVSELGTRKHRQGRDKHKIYTRR*IIEES 191 HS H + K KK H SE K + + KHK + R+ +IE S Sbjct: 41 HSRHKKKKHKHRSKHKKHKHSSEEDRDKKHKHKHKHKKHKRKEVIEAS 88
>HTPG_RALSO (Q8Y0Q3) Chaperone protein htpG (Heat shock protein htpG) (High| temperature protein G) Length = 640 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = -2 Query: 386 DNDPAAAKPKFGTYWVKDGKVIGVFLEGGSADENQAIAKVAR 261 D+D AA K K+ T+W G+V+ L A++++ IAK+ R Sbjct: 370 DSDDAAEKDKYATFWQHFGQVLKEGLGEDFANKDR-IAKLLR 410 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,472,973 Number of Sequences: 219361 Number of extensions: 799211 Number of successful extensions: 3049 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2984 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3044 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
