>ref|XM_469706.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1731

 Score =  155 bits (78), Expect = 2e-34
 Identities = 143/165 (86%)
 Strand = Plus / Minus

                                                                        
Query: 286  tcggcgccgtaccggagcacctcgtcgtcgcggcagatcctggccgtcgcctcggccggg 345
            |||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||| 
Sbjct: 1468 tcggcgccgtaccggagcacctcgccgtcgcggcagatcctggccgtcaccgccgccggc 1409

                                                                        
Query: 346  agcgtcaccactacgtccctcgccgcgtcgccctcggccgcgggcaggacgatcacgatc 405
            ||||||||| | ||||||||||| |  |||||||||||||  ||||||||||||||||  
Sbjct: 1408 agcgtcaccgccacgtccctcgcggactcgccctcggccgaaggcaggacgatcacgaga 1349

                                                         
Query: 406  ccctctccgacagccccgccgatgcggnacgccacgcgcgccggc 450
            ||||| |||   |||||||||| |||| ||||  |||||||||||
Sbjct: 1348 ccctcgccgctcgccccgccgacgcggcacgcggcgcgcgccggc 1304

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  155 bits (78), Expect = 2e-34
 Identities = 143/165 (86%)
 Strand = Plus / Plus

                                                                            
Query: 286      tcggcgccgtaccggagcacctcgtcgtcgcggcagatcctggccgtcgcctcggccggg 345
                |||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||| 
Sbjct: 30321772 tcggcgccgtaccggagcacctcgccgtcgcggcagatcctggccgtcaccgccgccggc 30321831

                                                                            
Query: 346      agcgtcaccactacgtccctcgccgcgtcgccctcggccgcgggcaggacgatcacgatc 405
                ||||||||| | ||||||||||| |  |||||||||||||  ||||||||||||||||  
Sbjct: 30321832 agcgtcaccgccacgtccctcgcggactcgccctcggccgaaggcaggacgatcacgaga 30321891

                                                             
Query: 406      ccctctccgacagccccgccgatgcggnacgccacgcgcgccggc 450
                ||||| |||   |||||||||| |||| ||||  |||||||||||
Sbjct: 30321892 ccctcgccgctcgccccgccgacgcggcacgcggcgcgcgccggc 30321936

>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete
              sequence
          Length = 130359

 Score =  155 bits (78), Expect = 2e-34
 Identities = 143/165 (86%)
 Strand = Plus / Plus

                                                                          
Query: 286    tcggcgccgtaccggagcacctcgtcgtcgcggcagatcctggccgtcgcctcggccggg 345
              |||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||| 
Sbjct: 113452 tcggcgccgtaccggagcacctcgccgtcgcggcagatcctggccgtcaccgccgccggc 113511

                                                                          
Query: 346    agcgtcaccactacgtccctcgccgcgtcgccctcggccgcgggcaggacgatcacgatc 405
              ||||||||| | ||||||||||| |  |||||||||||||  ||||||||||||||||  
Sbjct: 113512 agcgtcaccgccacgtccctcgcggactcgccctcggccgaaggcaggacgatcacgaga 113571

                                                           
Query: 406    ccctctccgacagccccgccgatgcggnacgccacgcgcgccggc 450
              ||||| |||   |||||||||| |||| ||||  |||||||||||
Sbjct: 113572 ccctcgccgctcgccccgccgacgcggcacgcggcgcgcgccggc 113616

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  155 bits (78), Expect = 2e-34
 Identities = 143/165 (86%)
 Strand = Plus / Plus

                                                                            
Query: 286      tcggcgccgtaccggagcacctcgtcgtcgcggcagatcctggccgtcgcctcggccggg 345
                |||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||| 
Sbjct: 30413194 tcggcgccgtaccggagcacctcgccgtcgcggcagatcctggccgtcaccgccgccggc 30413253

                                                                            
Query: 346      agcgtcaccactacgtccctcgccgcgtcgccctcggccgcgggcaggacgatcacgatc 405
                ||||||||| | ||||||||||| |  |||||||||||||  ||||||||||||||||  
Sbjct: 30413254 agcgtcaccgccacgtccctcgcggactcgccctcggccgaaggcaggacgatcacgaga 30413313

                                                             
Query: 406      ccctctccgacagccccgccgatgcggnacgccacgcgcgccggc 450
                ||||| |||   |||||||||| |||| ||||  |||||||||||
Sbjct: 30413314 ccctcgccgctcgccccgccgacgcggcacgcggcgcgcgccggc 30413358

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 282     cacctcggcgccgtaccggagcacctcgtcg 312
               ||||||||||| |||||||||||||||||||
Sbjct: 1618215 cacctcggcgcggtaccggagcacctcgtcg 1618185

>ref|NM_195139.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0051J07.11), mRNA
          Length = 567

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 365 tcgccgcgtcgccctcggccg 385
           |||||||||||||||||||||
Sbjct: 319 tcgccgcgtcgccctcggccg 299

>gb|AC098566.3| Oryza sativa chromosome 10 clone OSJNBa0051J07, complete sequence
          Length = 148301

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 365   tcgccgcgtcgccctcggccg 385
             |||||||||||||||||||||
Sbjct: 76138 tcgccgcgtcgccctcggccg 76118

>gb|AC055715.13|AC055715 Homo sapiens 12 BAC RP11-593B8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86800

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    aaaactacagcaataacaaca 110
             |||||||||||||||||||||
Sbjct: 73165 aaaactacagcaataacaaca 73185

>ref|XM_623604.1| PREDICTED: Apis mellifera similar to GA20548-PA (LOC414048), mRNA
          Length = 3521

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 7    gcaaatctaaataaatcggaa 27
            |||||||||||||||||||||
Sbjct: 2274 gcaaatctaaataaatcggaa 2294

>ref|XM_397483.2| PREDICTED: Apis mellifera similar to GA20548-PA (LOC414048), mRNA
          Length = 3486

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 7    gcaaatctaaataaatcggaa 27
            |||||||||||||||||||||
Sbjct: 2239 gcaaatctaaataaatcggaa 2259

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 365     tcgccgcgtcgccctcggccg 385
               |||||||||||||||||||||
Sbjct: 4929217 tcgccgcgtcgccctcggccg 4929197

>gb|AC009227.3|AC009227 Homo sapiens BAC clone RP11-187G20 from 2, complete sequence
          Length = 174149

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 88    tcaaaactacagcaataacaacata 112
             |||||||||||| ||||||||||||
Sbjct: 48420 tcaaaactacagtaataacaacata 48396

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 365     tcgccgcgtcgccctcggccg 385
               |||||||||||||||||||||
Sbjct: 4930004 tcgccgcgtcgccctcggccg 4929984

>ref|XM_631691.1| Dictyostelium discoideum hypothetical protein (DDB0187906), partial
            mRNA
          Length = 2505

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   tagtagtacaataacaccat 53
            ||||||||||||||||||||
Sbjct: 2007 tagtagtacaataacaccat 2026

>ref|NM_001004139.1| Mus musculus RIKEN cDNA 3000002G13 gene (3000002G13Rik), mRNA
          Length = 5988

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   aaactacagcaataacaaca 110
            ||||||||||||||||||||
Sbjct: 3724 aaactacagcaataacaaca 3705

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 365     tcgccgcgtcgccctcggcc 384
               ||||||||||||||||||||
Sbjct: 2111100 tcgccgcgtcgccctcggcc 2111081

>gb|AC164418.10| Mus musculus chromosome 1, clone RP23-431J24, complete sequence
          Length = 189965

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     aactacagcaataacaacat 111
              ||||||||||||||||||||
Sbjct: 181674 aactacagcaataacaacat 181655

>gb|AC107274.11| Rattus norvegicus 18 BAC CH230-207M17 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 217066

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     aagataaaaccttcaaaact 95
              ||||||||||||||||||||
Sbjct: 116306 aagataaaaccttcaaaact 116325

>gb|AC106595.9| Rattus norvegicus 7 BAC CH230-237N20 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 214961

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  atcaaaatcattccaaggca 172
            ||||||||||||||||||||
Sbjct: 5081 atcaaaatcattccaaggca 5100

>gb|AC123931.3| Mus musculus BAC clone RP23-307O16 from 15, complete sequence
          Length = 181350

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    atcaaaatcattccaaggca 172
              ||||||||||||||||||||
Sbjct: 105283 atcaaaatcattccaaggca 105302

>gb|AC103939.8| Mus musculus chromosome 18, clone RP23-300E7, complete sequence
          Length = 240406

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     ataaaaccttcaaaactacagcaa 102
              ||||||||||||||| ||||||||
Sbjct: 211467 ataaaaccttcaaaagtacagcaa 211490

>emb|AL033539.18|HS309H15 Human DNA sequence from clone RP1-309H15 on chromosome 6p22.1-22.3
             Contains a gene similar to hepatoma-derived growth factor
             (high-mobility group protein 1-like)(HDGF), part of a
             novel gene and a CpG Island, complete sequence
          Length = 143429

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   caaggcatcaccatcaaatt 185
             ||||||||||||||||||||
Sbjct: 30899 caaggcatcaccatcaaatt 30880

>emb|AL008710.1|HS292H14 Human DNA sequence from clone RP1-292H14 on chromosome Xp21, complete
             sequence
          Length = 97129

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    aaactacagcaataacaaca 110
             ||||||||||||||||||||
Sbjct: 65133 aaactacagcaataacaaca 65152

>gb|AC123178.4| Rattus norvegicus 7 BAC CH230-20I17 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 221236

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  atcaaaatcattccaaggca 172
            ||||||||||||||||||||
Sbjct: 5054 atcaaaatcattccaaggca 5035

>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    gccgcgtcgccctcggccgc 386
              ||||||||||||||||||||
Sbjct: 262793 gccgcgtcgccctcggccgc 262774

>gb|AY515701.1| Achromobacter xylosoxidans chloramphenicol acetyltransferase (cat)
            and Ana (ana) genes, complete cds
          Length = 3369

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 369  cgcgtcgccctcggccgcgg 388
            ||||||||||||||||||||
Sbjct: 1113 cgcgtcgccctcggccgcgg 1094

>emb|CR614876.1| full-length cDNA clone CS0DB002YH19 of Neuroblastoma Cot
            10-normalized of Homo sapiens (human)
          Length = 2705

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 166  caaggcatcaccatcaaatt 185
            ||||||||||||||||||||
Sbjct: 1102 caaggcatcaccatcaaatt 1121

>emb|BX510995.11| Zebrafish DNA sequence from clone CH211-57P8 in linkage group 14,
              complete sequence
          Length = 169766

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     caaaactacagcaataacaa 108
              ||||||||||||||||||||
Sbjct: 138930 caaaactacagcaataacaa 138911

>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     tgactatgaatccttaaatt 72
              ||||||||||||||||||||
Sbjct: 754523 tgactatgaatccttaaatt 754542

>gb|AC113955.20| Mus musculus chromosome 7, clone RP23-402K24, complete sequence
          Length = 196206

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    aaactacagcaataacaaca 110
             ||||||||||||||||||||
Sbjct: 80985 aaactacagcaataacaaca 80966

>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome
          Length = 351911

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 319    cagatcctggccgtcgcctcggcc 342
              |||||||||||| |||||||||||
Sbjct: 181764 cagatcctggccttcgcctcggcc 181787

>emb|BX088699.4| Zebrafish DNA sequence from clone CH211-192K19 in linkage group 9,
             complete sequence
          Length = 112979

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    caaaactacagcaataacaa 108
             ||||||||||||||||||||
Sbjct: 57527 caaaactacagcaataacaa 57546

>gb|AC112975.14| Mus musculus chromosome 1, clone RP24-468G12, complete sequence
          Length = 175974

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     aactacagcaataacaacat 111
              ||||||||||||||||||||
Sbjct: 139399 aactacagcaataacaacat 139418

>gb|BC080693.1| Mus musculus RIKEN cDNA 3000002G13 gene, mRNA (cDNA clone MGC:91101
            IMAGE:30432277), complete cds
          Length = 5988

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   aaactacagcaataacaaca 110
            ||||||||||||||||||||
Sbjct: 3724 aaactacagcaataacaaca 3705

>gb|AC104892.10| Mus musculus chromosome 18, clone RP23-262H4, complete sequence
          Length = 190380

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    ataaaaccttcaaaactacagcaa 102
             ||||||||||||||| ||||||||
Sbjct: 26036 ataaaaccttcaaaagtacagcaa 26059


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,598,543
Number of Sequences: 3902068
Number of extensions: 3598543
Number of successful extensions: 70680
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70134
Number of HSP's gapped (non-prelim): 546
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)