Clone Name | rbart45b12 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complet... | 40 | 0.86 | 2 | gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... | 38 | 3.4 | 3 | ref|XM_572219.1| Cryptococcus neoformans var. neoformans JEC21 h... | 38 | 3.4 | 4 | emb|BX571866.1| Photorhabdus luminescens subsp. laumondii TTO1 c... | 38 | 3.4 |
---|
>gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complete sequence Length = 195936 Score = 40.1 bits (20), Expect = 0.86 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 acaagctgaccaaacccccacttt 72 |||||||||||||| ||||||||| Sbjct: 168480 acaagctgaccaaaaccccacttt 168503
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 58 ccaaacccccacttttgactggc 80 |||||||||||||||||| |||| Sbjct: 1110998 ccaaacccccacttttgattggc 1111020
>ref|XM_572219.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNH00260) partial mRNA Length = 1771 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 ccaaacccccacttttgactggc 80 |||||||||||||||||| |||| Sbjct: 703 ccaaacccccacttttgattggc 681
>emb|BX571866.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 8/17 Length = 349652 Score = 38.2 bits (19), Expect = 3.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 21 caagcctctaagtataattcctg 43 ||||||||||| ||||||||||| Sbjct: 330570 caagcctctaaatataattcctg 330548 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 529,498 Number of Sequences: 3902068 Number of extensions: 529498 Number of successful extensions: 29253 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 29249 Number of HSP's gapped (non-prelim): 4 length of query: 82 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 61 effective length of database: 17,151,101,840 effective search space: 1046217212240 effective search space used: 1046217212240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)