>gb|AY827558.1| Trypanosoma congolense procyclin Sav2 mRNA, complete cds
          Length = 609

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 446 ctgcatttcaccatatcagtgc 467
           ||||||||||||||||||||||
Sbjct: 506 ctgcatttcaccatatcagtgc 485

>gb|AY827557.1| Trypanosoma congolense procyclin Sav1 mRNA, complete cds
          Length = 659

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 446 ctgcatttcaccatatcagtgc 467
           ||||||||||||||||||||||
Sbjct: 548 ctgcatttcaccatatcagtgc 527

>gb|AC115884.9| Mus musculus chromosome 18, clone RP24-396H6, complete sequence
          Length = 192449

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 239   acctggatgctcgctcctctcaactg 264
             |||||||| |||||||||||||||||
Sbjct: 92702 acctggatcctcgctcctctcaactg 92677

>gb|AC127229.3| Mus musculus BAC clone RP24-553F13 from chromosome 18, complete sequence
          Length = 166995

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 239    acctggatgctcgctcctctcaactg 264
              |||||||| |||||||||||||||||
Sbjct: 154142 acctggatcctcgctcctctcaactg 154117

>gb|AC161874.3| Mus musculus BAC clone RP24-177G20 from chromosome 18, complete
             sequence
          Length = 170891

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 239   acctggatgctcgctcctctcaactg 264
             |||||||| |||||||||||||||||
Sbjct: 36346 acctggatcctcgctcctctcaactg 36321

>emb|AL023875.2|HS1044O17 Human DNA sequence from clone RP5-1044O17 on chromosome Xp11.3-11.4
             Contains the 5' end of a novel gene and a CpG island,
             complete sequence
          Length = 122325

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 313   cacataaccaagccaaaagcc 333
             |||||||||||||||||||||
Sbjct: 38407 cacataaccaagccaaaagcc 38427

>gb|AC108211.3| Homo sapiens BAC clone RP11-511I14 from 4, complete sequence
          Length = 222457

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     ccaagtaaaaaagacatggtt 98
              |||||||||||||||||||||
Sbjct: 159031 ccaagtaaaaaagacatggtt 159011

>gb|AC183287.1| Pan troglodytes chromosome X clone CH251-59K17 map human ortholog
            p11.4, complete sequence
          Length = 225601

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 313  cacataaccaagccaaaagcc 333
            |||||||||||||||||||||
Sbjct: 6515 cacataaccaagccaaaagcc 6535

>gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complete sequence
          Length = 137457

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    gtaaaaaagacatggtttggg 102
             |||||||||||||||||||||
Sbjct: 57644 gtaaaaaagacatggtttggg 57624

>gb|AC102318.8| Mus musculus chromosome 7, clone RP24-447C20, complete sequence
          Length = 145005

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    actccaaacaccaagtaaaa 87
             ||||||||||||||||||||
Sbjct: 28228 actccaaacaccaagtaaaa 28247

>ref|XM_506432.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1060_D03.106 mRNA
          Length = 1983

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 60/72 (83%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                        
Query: 67   gactccaaacaccaagtaaaaaagacatggtttgggtatccagcattcccctataacctt 126
            ||||||||||   ||| |||||||||||||||   | ||||| ||||| |||||||||||
Sbjct: 1921 gactccaaaccagaaggaaaaaagacatggttgatg-atccatcattctcctataacctt 1863

                        
Query: 127  gcaaagccaagc 138
             | |||||||||
Sbjct: 1862 tccaagccaagc 1851

>gb|AE017136.1| Yersinia pestis biovar Medievalis str. 91001 section 10 of 16 of the
              complete genome
          Length = 290294

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     atggtttgggtatccagcat 112
              ||||||||||||||||||||
Sbjct: 207650 atggtttgggtatccagcat 207669

>gb|AY728232.1| Plethodon cinereus mitochondrion, complete genome
          Length = 20001

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  agccggcattaccatattac 155
            ||||||||||||||||||||
Sbjct: 5817 agccggcattaccatattac 5836

>gb|AC102152.12| Mus musculus chromosome 7, clone RP23-314H9, complete sequence
          Length = 206923

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   actccaaacaccaagtaaaa 87
            ||||||||||||||||||||
Sbjct: 6903 actccaaacaccaagtaaaa 6884

>gb|AY377151.1| Gulo gulo cytochrome oxidase subunit I (COX1) gene, complete cds;
           mitochondrial gene for mitochondrial product
          Length = 1545

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 agccggcattaccatattac 155
           ||||||||||||||||||||
Sbjct: 609 agccggcattaccatattac 628

>gb|AC130674.7| Mus musculus chromosome 1, clone RP24-98E13, complete sequence
          Length = 167746

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    aaacaccaagtaaaaaagac 92
             ||||||||||||||||||||
Sbjct: 36463 aaacaccaagtaaaaaagac 36482

>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 93      atggtttgggtatccagcat 112
               ||||||||||||||||||||
Sbjct: 1470020 atggtttgggtatccagcat 1470039

>emb|AL592504.6| Human DNA sequence from clone RP11-320J16 on chromosome X Contains part
              of a novel gene, complete sequence
          Length = 173828

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    ttcaccatatcagtgctgca 471
              ||||||||||||||||||||
Sbjct: 138623 ttcaccatatcagtgctgca 138642

>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 93      atggtttgggtatccagcat 112
               ||||||||||||||||||||
Sbjct: 3395706 atggtttgggtatccagcat 3395687

>emb|AJ414154.1| Yersinia pestis strain CO92 complete genome; segment 14/20
          Length = 204050

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    atggtttgggtatccagcat 112
             ||||||||||||||||||||
Sbjct: 79885 atggtttgggtatccagcat 79866

>emb|BX248512.14| Zebrafish DNA sequence from clone CH211-284D12 in linkage group 2,
              complete sequence
          Length = 146757

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    gccgttatttacacatgatc 354
              ||||||||||||||||||||
Sbjct: 118415 gccgttatttacacatgatc 118396

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 1        aaatcaggaaacaaacagtt 20
                ||||||||||||||||||||
Sbjct: 12311739 aaatcaggaaacaaacagtt 12311758

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 60/72 (83%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                            
Query: 67       gactccaaacaccaagtaaaaaagacatggtttgggtatccagcattcccctataacctt 126
                ||||||||||   ||| |||||||||||||||   | ||||| ||||| |||||||||||
Sbjct: 23671147 gactccaaaccagaaggaaaaaagacatggttgatg-atccatcattctcctataacctt 23671089

                            
Query: 127      gcaaagccaagc 138
                 | |||||||||
Sbjct: 23671088 tccaagccaagc 23671077

>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 60/72 (83%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                         
Query: 67    gactccaaacaccaagtaaaaaagacatggtttgggtatccagcattcccctataacctt 126
             ||||||||||   ||| |||||||||||||||   | ||||| ||||| |||||||||||
Sbjct: 15761 gactccaaaccagaaggaaaaaagacatggttgatg-atccatcattctcctataacctt 15703

                         
Query: 127   gcaaagccaagc 138
              | |||||||||
Sbjct: 15702 tccaagccaagc 15691

>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1127_E01
          Length = 123787

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 60/72 (83%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                          
Query: 67     gactccaaacaccaagtaaaaaagacatggtttgggtatccagcattcccctataacctt 126
              ||||||||||   ||| |||||||||||||||   | ||||| ||||| |||||||||||
Sbjct: 123588 gactccaaaccagaaggaaaaaagacatggttgatg-atccatcattctcctataacctt 123530

                          
Query: 127    gcaaagccaagc 138
               | |||||||||
Sbjct: 123529 tccaagccaagc 123518

>dbj|AK070373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054E09, full
           insert sequence
          Length = 1885

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   aaatcaggaaacaaacagtt 20
           ||||||||||||||||||||
Sbjct: 105 aaatcaggaaacaaacagtt 86

>dbj|AK059561.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-H02, full
            insert sequence
          Length = 1983

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 60/72 (83%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                        
Query: 67   gactccaaacaccaagtaaaaaagacatggtttgggtatccagcattcccctataacctt 126
            ||||||||||   ||| |||||||||||||||   | ||||| ||||| |||||||||||
Sbjct: 1921 gactccaaaccagaaggaaaaaagacatggttgatg-atccatcattctcctataacctt 1863

                        
Query: 127  gcaaagccaagc 138
             | |||||||||
Sbjct: 1862 tccaagccaagc 1851

>emb|CT573096.4| RP43-083N14, complete sequence
          Length = 169666

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    ttcaccatatcagtgctgca 471
              ||||||||||||||||||||
Sbjct: 166529 ttcaccatatcagtgctgca 166510

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 1        aaatcaggaaacaaacagtt 20
                ||||||||||||||||||||
Sbjct: 12266109 aaatcaggaaacaaacagtt 12266128

>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 163702

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaatcaggaaacaaacagtt 20
             ||||||||||||||||||||
Sbjct: 26104 aaatcaggaaacaaacagtt 26123

>emb|CT476806.2| Pan troglodytes chromosome X BAC RP43-032D14, complete sequence
          Length = 145919

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   ttcaccatatcagtgctgca 471
             ||||||||||||||||||||
Sbjct: 45181 ttcaccatatcagtgctgca 45162

>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    acatataactgagcagcaat 218
              ||||||||||||||||||||
Sbjct: 176679 acatataactgagcagcaat 176660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,747,157
Number of Sequences: 3902068
Number of extensions: 3747157
Number of successful extensions: 61459
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 61312
Number of HSP's gapped (non-prelim): 147
length of query: 495
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 473
effective length of database: 17,147,199,772
effective search space: 8110625492156
effective search space used: 8110625492156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)