ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart45b04 |
|---|---|
| Clone Library Name | barley_pub |
>UGDH_SOYBN (Q96558) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 480 Score = 168 bits (425), Expect = 9e-42 Identities = 77/90 (85%), Positives = 86/90 (95%) Frame = -3 Query: 511 PTSPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVV 332 PTSP++VK+VSVVWDAYEATK AH +CILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+V Sbjct: 391 PTSPTTVKKVSVVWDAYEATKDAHGLCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIV 450 Query: 331 NADKLREIGFIVYSIGKPLDAWLKDMPAIA 242 +ADKLREIGFIVYSIGKPLD WLKDMPA+A Sbjct: 451 DADKLREIGFIVYSIGKPLDPWLKDMPAVA 480
>UGDH_CAEEL (Q19905) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) (Squashed vulva protein 4) Length = 481 Score = 80.5 bits (197), Expect = 2e-15 Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 1/80 (1%) Frame = -3 Query: 508 TSPSSVKQ-VSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVV 332 TS V++ ++V D Y A +GAHA+ +LTEW+EF EL+Y +I N+MQ PA +FDGR ++ Sbjct: 391 TSAQDVERLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLIL 450 Query: 331 NADKLREIGFIVYSIGKPLD 272 + LREIGF ++IG D Sbjct: 451 DQKALREIGFRTFAIGTSPD 470
>UGDH_DROME (O02373) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) (Protein sugarless) Length = 476 Score = 80.1 bits (196), Expect = 3e-15 Identities = 35/76 (46%), Positives = 56/76 (73%), Gaps = 1/76 (1%) Frame = -3 Query: 505 SPSSVKQ-VSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVN 329 SP VK+ V + D Y A + HA+ I TEW+EF +LD+++I+ +M KPA++FDGR +++ Sbjct: 384 SPEKVKKAVQIHSDPYSAVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILD 443 Query: 328 ADKLREIGFIVYSIGK 281 ++L++IGF V +IGK Sbjct: 444 HERLQQIGFHVQTIGK 459
>UGDH_HUMAN (O60701) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 494 Score = 78.2 bits (191), Expect = 1e-14 Identities = 38/74 (51%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -3 Query: 484 VSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA--DKLRE 311 V++ D YEA GAHAV I TEW+ FKELDY++I M KPAF+FDGR V++ ++L+ Sbjct: 395 VTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQT 454 Query: 310 IGFIVYSIGKPLDA 269 IGF + +IGK + + Sbjct: 455 IGFQIETIGKKVSS 468
>UGDH_BOVIN (P12378) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 494 Score = 78.2 bits (191), Expect = 1e-14 Identities = 38/74 (51%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -3 Query: 484 VSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA--DKLRE 311 V++ D YEA GAHAV I TEW+ FKELDY++I M KPAF+FDGR V++ ++L+ Sbjct: 395 VTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQT 454 Query: 310 IGFIVYSIGKPLDA 269 IGF + +IGK + + Sbjct: 455 IGFQIETIGKKVSS 468
>UGDH_RAT (O70199) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 493 Score = 77.0 bits (188), Expect = 3e-14 Identities = 37/74 (50%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -3 Query: 484 VSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA--DKLRE 311 V++ D YEA GAHA+ I TEW+ FKELDY++I M KPAF+FDGR V++ ++L+ Sbjct: 395 VTISKDPYEACDGAHALVICTEWDMFKELDYERIHKRMLKPAFIFDGRRVLDGLHNELQT 454 Query: 310 IGFIVYSIGKPLDA 269 IGF + +IGK + + Sbjct: 455 IGFQIETIGKKVSS 468
>UGDH_MOUSE (O70475) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 493 Score = 76.6 bits (187), Expect = 4e-14 Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 2/74 (2%) Frame = -3 Query: 484 VSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA--DKLRE 311 V++ D YEA GAHA+ I TEW+ FKELDY++I M KPAF+FDGR V++ +L+ Sbjct: 395 VTISKDPYEACDGAHALVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHSELQT 454 Query: 310 IGFIVYSIGKPLDA 269 IGF + +IGK + + Sbjct: 455 IGFQIETIGKKVSS 468
>UDG_PSEAE (O86422) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 453 Score = 59.3 bits (142), Expect = 6e-09 Identities = 27/62 (43%), Positives = 42/62 (67%) Frame = -3 Query: 463 YEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNADKLREIGFIVYSIG 284 Y A +GA A+ ++TEW +F++ D+QKI +M+ P V DGRN+ ++ E+GFI IG Sbjct: 383 YAAVEGADALVLVTEWKQFRQPDFQKIRGSMRTPLLV-DGRNLYAPARMAELGFIYQGIG 441 Query: 283 KP 278 +P Sbjct: 442 RP 443
>UDG_RHIME (O54068) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 437 Score = 57.0 bits (136), Expect = 3e-08 Identities = 28/64 (43%), Positives = 41/64 (64%) Frame = -3 Query: 469 DAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNADKLREIGFIVYS 290 D YEA A A+ I+TEWNEF+ LD+ ++ + M+ P V D RN+ D++ + GF S Sbjct: 374 DPYEAAAEADALVIITEWNEFRALDFDRLKSTMKTPLLV-DLRNIYRKDEVAKHGFRYAS 432 Query: 289 IGKP 278 IG+P Sbjct: 433 IGRP 436
>UDG_RICPR (O05973) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 434 Score = 57.0 bits (136), Expect = 3e-08 Identities = 25/64 (39%), Positives = 44/64 (68%) Frame = -3 Query: 466 AYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNADKLREIGFIVYSI 287 A EA K + I TEW+EFKEL++Q+I+N ++ P + D RN+++ + +++IGF Y++ Sbjct: 372 AVEACKSVDIIVIATEWSEFKELNWQEIYNLVKSP-MIIDLRNILDNEVMKKIGFRYYAV 430 Query: 286 GKPL 275 G + Sbjct: 431 GSQI 434
>UDG_RICCN (Q92GB1) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) Length = 432 Score = 54.7 bits (130), Expect = 1e-07 Identities = 23/64 (35%), Positives = 44/64 (68%) Frame = -3 Query: 466 AYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNADKLREIGFIVYSI 287 A +A K + I TEW+EFKEL++Q+I++ ++ P + D RN+++ + +++IGF Y++ Sbjct: 370 AVDACKSVDIIVIATEWSEFKELNWQEIYDLVKSP-IIIDFRNILDNETMKKIGFRYYAV 428 Query: 286 GKPL 275 G + Sbjct: 429 GSKI 432
>TUAD_BACSU (O32271) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) (Teichuronic acid biosynthesis protein tuaD) Length = 461 Score = 54.3 bits (129), Expect = 2e-07 Identities = 25/71 (35%), Positives = 44/71 (61%) Frame = -3 Query: 490 KQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNADKLRE 311 +QV D Y A + A ILT+W E KE++ K+ +++P + DGRN+ + ++++ Sbjct: 363 EQVEYYTDVYAAMEDTDACLILTDWPEVKEMELVKVKTLLKQPV-IIDGRNLFSLEEMQA 421 Query: 310 IGFIVYSIGKP 278 G+I +SIG+P Sbjct: 422 AGYIYHSIGRP 432
>Y1054_METJA (Q58454) Hypothetical protein MJ1054 (EC 1.1.1.-) [Contains: Mja| UDPGD intein] Length = 895 Score = 51.2 bits (121), Expect = 2e-06 Identities = 24/66 (36%), Positives = 42/66 (63%) Frame = -3 Query: 478 VVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNADKLREIGFI 299 V+ D YE K + I E+ +F + D++KI N+ K VFDGRN+++ +K++++GF Sbjct: 832 VLDDLYETVKNVDGIIITVEY-DFNKEDWEKI-GNLVKEKVVFDGRNILDVEKIKKLGFK 889 Query: 298 VYSIGK 281 Y +G+ Sbjct: 890 YYGVGR 895
>YKD8_YEAST (P32862) Putative 128.2 kDa transcriptional regulatory protein in| PTM1-IXR1 intergenic region Length = 1170 Score = 29.6 bits (65), Expect = 5.0 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = +1 Query: 76 KTAQGLRNMYDLQTAVQERRTRSKDTNTTQFYA*LKMPRLRK-SL*NFLQLLWR 234 K+ QGLR ++T + ERRT T A + PRL +L NF+ + W+ Sbjct: 1109 KSGQGLRESSVMKTLLDERRTSGTQPTTAPVAA--EEPRLENVALENFVSIGWK 1160
>CBP2_HORVU (P08818) Serine carboxypeptidase 2 precursor (EC 3.4.16.6) (Serine| carboxypeptidase II) (Carboxypeptidase D) (CP-MII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine Length = 476 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/25 (60%), Positives = 16/25 (64%) Frame = -2 Query: 305 LHCLLHRQAARCVAQGHARDRLVPL 231 L CLL R AA A GHA DR+V L Sbjct: 22 LTCLLLRPAAVAAAGGHAADRIVRL 46
>VGP_MABVP (P35254) Structural glycoprotein precursor (Virion spike| glycoprotein) Length = 681 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +1 Query: 19 NNQIAISSLDTNKHSFTILKTAQGLRNMYDLQTAVQERRTRSKDTNTT 162 +N AIS+ +T+K++F+ L + YD Q+ E S + TT Sbjct: 336 HNTTAISTNNTSKNNFSTLSVSLQNTTNYDTQSTATENEQTSAPSKTT 383 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,044,998 Number of Sequences: 219361 Number of extensions: 1267941 Number of successful extensions: 3638 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3535 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3633 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
