ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart45b04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009444.1| Triticum aestivum clone wlmk8.pk0004.f6:fis, full insert mRNA sequence Length = 1858 Score = 327 bits (165), Expect = 2e-86 Identities = 225/245 (91%) Strand = Plus / Minus Query: 249 gcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcca 308 |||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| Sbjct: 1542 gcgggcatgtccttgagccagccgtcgagcggcttgccgatggagtagacgatgaagccg 1483 Query: 309 atctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttc 368 |||||||||||||| ||||||| |||||||||||| ||||| || |||||||| |||||| Sbjct: 1482 atctccctgagcttctcggcgtcgacgacgttgcggccgtcaaacacgaaggcgggcttc 1423 Query: 369 tgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcagg 428 |||||||||| |||||||||||||||||| |||| ||||||||||| ||||||||| ||| Sbjct: 1422 tgcatgttgtcgaagatcttctggtagtcgagcttcttgaactcgtcccactcggtgagg 1363 Query: 429 atgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctgc 488 ||||||||| | ||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1362 atgcacacgccgtgggcgcccttggcggcctcgtacgcgtcccacaccacgctcacctgc 1303 Query: 489 ttcac 493 ||||| Sbjct: 1302 ttcac 1298
>gb|BT016824.1| Zea mays clone Contig657 mRNA sequence Length = 1951 Score = 305 bits (154), Expect = 8e-80 Identities = 229/254 (90%) Strand = Plus / Minus Query: 240 taggcgatcgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagaca 299 ||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 1611 taggcgaccgcgggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacg 1552 Query: 300 atgaagccaatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaag 359 |||||||| |||||||| ||||| |||| || ||||| |||||| ||||||||||||||| Sbjct: 1551 atgaagccgatctccctcagcttctcggagtcgacgatgttgcggccgtcgaagacgaag 1492 Query: 360 gccggcttctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccac 419 || |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||| Sbjct: 1491 gcgggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccac 1432 Query: 420 tcggtcaggatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacg 479 |||||||||||||||| | ||||| ||||||||||||||||||||||||||||| | Sbjct: 1431 tcggtcaggatgcacagcccgtgggcgcccttggtggcctcgtacgcgtcccacacgcag 1372 Query: 480 ctcacctgcttcac 493 |||||||||||||| Sbjct: 1371 ctcacctgcttcac 1358
>ref|XM_469834.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2058 Score = 297 bits (150), Expect = 2e-77 Identities = 219/242 (90%) Strand = Plus / Minus Query: 249 gcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcca 308 |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 1640 gcgggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacgatgaagccg 1581 Query: 309 atctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttc 368 |||||||||||||| || | || |||||||||||| |||||||||||||| ||||||||| Sbjct: 1580 atctccctgagcttctccgggtcgacgacgttgcggccgtcgaagacgaacgccggcttc 1521 Query: 369 tgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcagg 428 |||||||||| | |||||||||||||||| ||| ||||||||||| ||||||||| ||| Sbjct: 1520 tgcatgttgtcgtagatcttctggtagtcgagcgtcttgaactcgtcccactcggtgagg 1461 Query: 429 atgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctgc 488 ||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1460 atgcagaggccatgggcgttcttggtggcctcgtacgcgtcccacaccacgctcacctgc 1401 Query: 489 tt 490 || Sbjct: 1400 tt 1399
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 297 bits (150), Expect = 2e-77 Identities = 219/242 (90%) Strand = Plus / Minus Query: 249 gcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcca 308 |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 31014046 gcgggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacgatgaagccg 31013987 Query: 309 atctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttc 368 |||||||||||||| || | || |||||||||||| |||||||||||||| ||||||||| Sbjct: 31013986 atctccctgagcttctccgggtcgacgacgttgcggccgtcgaagacgaacgccggcttc 31013927 Query: 369 tgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcagg 428 |||||||||| | |||||||||||||||| ||| ||||||||||| ||||||||| ||| Sbjct: 31013926 tgcatgttgtcgtagatcttctggtagtcgagcgtcttgaactcgtcccactcggtgagg 31013867 Query: 429 atgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctgc 488 ||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 31013866 atgcagaggccatgggcgttcttggtggcctcgtacgcgtcccacaccacgctcacctgc 31013807 Query: 489 tt 490 || Sbjct: 31013806 tt 31013805 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 17588482 ggcatgtccttgagccaggcatcgagaggcttgccaatggagtagacgatgaatccaatc 17588423 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 ||||| ||||| || |||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 17588422 tccctcagcttctcagcgtcaaccacgttgcgcccgtcgaacacgaacgccggcttctgc 17588363 Query: 372 at 373 || Sbjct: 17588362 at 17588361 Score = 101 bits (51), Expect = 2e-18 Identities = 156/191 (81%) Strand = Plus / Plus Query: 249 gcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcca 308 |||||||||||| ||||||| |||||||||||||||||||||||||| | |||||| Sbjct: 22449508 gcgggcatgtccctgagccagtggtcgagcggcttgccgatggagtagacgacgaagccg 22449567 Query: 309 atctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttc 368 || | ||||||||| | || |||||||||||| |||||||||| |||||||||||| Sbjct: 22449568 atgcggcggagcttgtccgggtcgacgacgttgcggccgtcgaagaggaaggccggcttg 22449627 Query: 369 tgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcagg 428 |||||| || | | ||| ||||||||| ||| |||||||| ||||||||| ||| Sbjct: 22449628 tgcatggcgtcgtacatccgctggtagtcgagccggcggaactcgtcccactcggtgagg 22449687 Query: 429 atgcacacggc 439 ||||| ||||| Sbjct: 22449688 atgcagacggc 22449698
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 297 bits (150), Expect = 2e-77 Identities = 219/242 (90%) Strand = Plus / Plus Query: 249 gcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcca 308 |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 82018 gcgggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacgatgaagccg 82077 Query: 309 atctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttc 368 |||||||||||||| || | || |||||||||||| |||||||||||||| ||||||||| Sbjct: 82078 atctccctgagcttctccgggtcgacgacgttgcggccgtcgaagacgaacgccggcttc 82137 Query: 369 tgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcagg 428 |||||||||| | |||||||||||||||| ||| ||||||||||| ||||||||| ||| Sbjct: 82138 tgcatgttgtcgtagatcttctggtagtcgagcgtcttgaactcgtcccactcggtgagg 82197 Query: 429 atgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctgc 488 ||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 82198 atgcagaggccatgggcgttcttggtggcctcgtacgcgtcccacaccacgctcacctgc 82257 Query: 489 tt 490 || Sbjct: 82258 tt 82259
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 297 bits (150), Expect = 2e-77 Identities = 219/242 (90%) Strand = Plus / Minus Query: 249 gcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcca 308 |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 31104569 gcgggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacgatgaagccg 31104510 Query: 309 atctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttc 368 |||||||||||||| || | || |||||||||||| |||||||||||||| ||||||||| Sbjct: 31104509 atctccctgagcttctccgggtcgacgacgttgcggccgtcgaagacgaacgccggcttc 31104450 Query: 369 tgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcagg 428 |||||||||| | |||||||||||||||| ||| ||||||||||| ||||||||| ||| Sbjct: 31104449 tgcatgttgtcgtagatcttctggtagtcgagcgtcttgaactcgtcccactcggtgagg 31104390 Query: 429 atgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctgc 488 ||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 31104389 atgcagaggccatgggcgttcttggtggcctcgtacgcgtcccacaccacgctcacctgc 31104330 Query: 489 tt 490 || Sbjct: 31104329 tt 31104328 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 17582023 ggcatgtccttgagccaggcatcgagaggcttgccaatggagtagacgatgaatccaatc 17581964 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 ||||| ||||| || |||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 17581963 tccctcagcttctcagcgtcaaccacgttgcgcccgtcgaacacgaacgccggcttctgc 17581904 Query: 372 at 373 || Sbjct: 17581903 at 17581902 Score = 101 bits (51), Expect = 2e-18 Identities = 156/191 (81%) Strand = Plus / Plus Query: 249 gcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcca 308 |||||||||||| ||||||| |||||||||||||||||||||||||| | |||||| Sbjct: 22442537 gcgggcatgtccctgagccagtggtcgagcggcttgccgatggagtagacgacgaagccg 22442596 Query: 309 atctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttc 368 || | ||||||||| | || |||||||||||| |||||||||| |||||||||||| Sbjct: 22442597 atgcggcggagcttgtccgggtcgacgacgttgcggccgtcgaagaggaaggccggcttg 22442656 Query: 369 tgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcagg 428 |||||| || | | ||| ||||||||| ||| |||||||| ||||||||| ||| Sbjct: 22442657 tgcatggcgtcgtacatccgctggtagtcgagccggcggaactcgtcccactcggtgagg 22442716 Query: 429 atgcacacggc 439 ||||| ||||| Sbjct: 22442717 atgcagacggc 22442727
>dbj|AK098880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F12, full insert sequence Length = 1946 Score = 297 bits (150), Expect = 2e-77 Identities = 219/242 (90%) Strand = Plus / Minus Query: 249 gcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcca 308 |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 1545 gcgggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacgatgaagccg 1486 Query: 309 atctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttc 368 |||||||||||||| || | || |||||||||||| |||||||||||||| ||||||||| Sbjct: 1485 atctccctgagcttctccgggtcgacgacgttgcggccgtcgaagacgaacgccggcttc 1426 Query: 369 tgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcagg 428 |||||||||| | |||||||||||||||| ||| ||||||||||| ||||||||| ||| Sbjct: 1425 tgcatgttgtcgtagatcttctggtagtcgagcgtcttgaactcgtcccactcggtgagg 1366 Query: 429 atgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctgc 488 ||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1365 atgcagaggccatgggcgttcttggtggcctcgtacgcgtcccacaccacgctcacctgc 1306 Query: 489 tt 490 || Sbjct: 1305 tt 1304
>gb|BT017136.1| Zea mays clone EL01N0365H08.c mRNA sequence Length = 1682 Score = 285 bits (144), Expect = 7e-74 Identities = 222/248 (89%) Strand = Plus / Minus Query: 243 gcgatcgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatg 302 |||| ||||||||||||||| ||||| || |||||||||||||||||||||||||| ||| Sbjct: 1352 gcgaccgcgggcatgtccttaagccaggcgtcgagcggcttgccgatggagtagacgatg 1293 Query: 303 aagccaatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggcc 362 ||||| |||||||| ||||| || | || ||||| |||||| ||||||||||||||||| Sbjct: 1292 aagccgatctccctcagcttctccgggtcgacgatgttgcggccgtcgaagacgaaggcg 1233 Query: 363 ggcttctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcg 422 |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 1232 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 1173 Query: 423 gtcaggatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctc 482 |||||||||||||| | ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 1172 gtcaggatgcacaccccgtgggcgcccttggtggcctcgtacgcgtcccacacgcagctc 1113 Query: 483 acctgctt 490 |||||||| Sbjct: 1112 acctgctt 1105
>gb|AY103689.1| Zea mays PCO113568 mRNA sequence Length = 1967 Score = 285 bits (144), Expect = 7e-74 Identities = 222/248 (89%) Strand = Plus / Minus Query: 243 gcgatcgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatg 302 |||| ||||||||||||||| ||||| || |||||||||||||||||||||||||| ||| Sbjct: 1611 gcgaccgcgggcatgtccttaagccaggcgtcgagcggcttgccgatggagtagacgatg 1552 Query: 303 aagccaatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggcc 362 ||||| |||||||| ||||| || | || ||||| |||||| ||||||||||||||||| Sbjct: 1551 aagccgatctccctcagcttctccgggtcgacgatgttgcggccgtcgaagacgaaggcg 1492 Query: 363 ggcttctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcg 422 |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 1491 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 1432 Query: 423 gtcaggatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctc 482 |||||||||||||| | ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 1431 gtcaggatgcacaccccgtgggcgcccttggtggcctcgtacgcgtcccacacgcagctc 1372 Query: 483 acctgctt 490 |||||||| Sbjct: 1371 acctgctt 1364
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 268 bits (135), Expect = 2e-68 Identities = 216/243 (88%) Strand = Plus / Minus Query: 248 cgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcc 307 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| || Sbjct: 14934429 cgcgggcatgtccttgagccaggcatcaagcggcttgccgatggagtagacgatgaaccc 14934370 Query: 308 aatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggctt 367 ||||||||||||||| ||||| | ||| || |||||||| || |||||||| || ||||| Sbjct: 14934369 aatctccctgagcttctcggcatcgaccacattgcgcccatcaaagacgaatgcaggctt 14934310 Query: 368 ctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcag 427 ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||| || Sbjct: 14934309 ctgcatgttgtcaaagatcttctggtagtccaaggtcttgaactcgtcccactcggtgag 14934250 Query: 428 gatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctg 487 |||||| || |||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 14934249 gatgcagacaccatgggcccccttggtggcctcatatgcatcccacaccacgctcacctg 14934190 Query: 488 ctt 490 ||| Sbjct: 14934189 ctt 14934187 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Minus Query: 248 cgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcc 307 |||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct: 14940305 cgcgggcatgtctttgagccatgcatcaagcggcttgccgatagagtagacaatgaagcc 14940246 Query: 308 aatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggctt 367 ||||||||||||||| || | | ||| || |||||||| |||||||| || || || || Sbjct: 14940245 aatctccctgagcttctcaggatcgaccacattgcgcccatcgaagacaaatgcaggttt 14940186 Query: 368 ctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcag 427 ||||||||||| |||||| |||||||||||| ||||||||||| |||||| || || Sbjct: 14940185 ctgcatgttgtcaaagatcctctggtagtccaaggtcttgaactcgtcccactcagtgag 14940126 Query: 428 gatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctg 487 |||||||| ||||||| |||||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 14940125 gatgcacagtccatgggctcccttggtggcctcatacgcatcccagaccacactcacctg 14940066 Query: 488 ctt 490 ||| Sbjct: 14940065 ctt 14940063
>dbj|AK104003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H11, full insert sequence Length = 1852 Score = 268 bits (135), Expect = 2e-68 Identities = 216/243 (88%) Strand = Plus / Minus Query: 248 cgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcc 307 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| || Sbjct: 1554 cgcgggcatgtccttgagccaggcatcaagcggcttgccgatggagtagacgatgaaccc 1495 Query: 308 aatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggctt 367 ||||||||||||||| ||||| | ||| || |||||||| || |||||||| || ||||| Sbjct: 1494 aatctccctgagcttctcggcatcgaccacattgcgcccatcaaagacgaatgcaggctt 1435 Query: 368 ctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcag 427 ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||| || Sbjct: 1434 ctgcatgttgtcaaagatcttctggtagtccaaggtcttgaactcgtcccactcggtgag 1375 Query: 428 gatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctg 487 |||||| || |||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 1374 gatgcagacaccatgggcccccttggtggcctcatatgcatcccacaccacgctcacctg 1315 Query: 488 ctt 490 ||| Sbjct: 1314 ctt 1312
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 268 bits (135), Expect = 2e-68 Identities = 216/243 (88%) Strand = Plus / Minus Query: 248 cgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcc 307 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| || Sbjct: 14888712 cgcgggcatgtccttgagccaggcatcaagcggcttgccgatggagtagacgatgaaccc 14888653 Query: 308 aatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggctt 367 ||||||||||||||| ||||| | ||| || |||||||| || |||||||| || ||||| Sbjct: 14888652 aatctccctgagcttctcggcatcgaccacattgcgcccatcaaagacgaatgcaggctt 14888593 Query: 368 ctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcag 427 ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||| || Sbjct: 14888592 ctgcatgttgtcaaagatcttctggtagtccaaggtcttgaactcgtcccactcggtgag 14888533 Query: 428 gatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctg 487 |||||| || |||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 14888532 gatgcagacaccatgggcccccttggtggcctcatatgcatcccacaccacgctcacctg 14888473 Query: 488 ctt 490 ||| Sbjct: 14888472 ctt 14888470 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Minus Query: 248 cgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcc 307 |||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct: 14894588 cgcgggcatgtctttgagccatgcatcaagcggcttgccgatagagtagacaatgaagcc 14894529 Query: 308 aatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggctt 367 ||||||||||||||| || | | ||| || |||||||| |||||||| || || || || Sbjct: 14894528 aatctccctgagcttctcaggatcgaccacattgcgcccatcgaagacaaatgcaggttt 14894469 Query: 368 ctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcag 427 ||||||||||| |||||| |||||||||||| ||||||||||| |||||| || || Sbjct: 14894468 ctgcatgttgtcaaagatcctctggtagtccaaggtcttgaactcgtcccactcagtgag 14894409 Query: 428 gatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctg 487 |||||||| ||||||| |||||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 14894408 gatgcacagtccatgggctcccttggtggcctcatacgcatcccagaccacactcacctg 14894349 Query: 488 ctt 490 ||| Sbjct: 14894348 ctt 14894346
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 268 bits (135), Expect = 2e-68 Identities = 216/243 (88%) Strand = Plus / Plus Query: 248 cgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcc 307 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| || Sbjct: 147418 cgcgggcatgtccttgagccaggcatcaagcggcttgccgatggagtagacgatgaaccc 147477 Query: 308 aatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggctt 367 ||||||||||||||| ||||| | ||| || |||||||| || |||||||| || ||||| Sbjct: 147478 aatctccctgagcttctcggcatcgaccacattgcgcccatcaaagacgaatgcaggctt 147537 Query: 368 ctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcag 427 ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||| || Sbjct: 147538 ctgcatgttgtcaaagatcttctggtagtccaaggtcttgaactcgtcccactcggtgag 147597 Query: 428 gatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctg 487 |||||| || |||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 147598 gatgcagacaccatgggcccccttggtggcctcatatgcatcccacaccacgctcacctg 147657 Query: 488 ctt 490 ||| Sbjct: 147658 ctt 147660 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Plus Query: 248 cgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcc 307 |||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct: 141542 cgcgggcatgtctttgagccatgcatcaagcggcttgccgatagagtagacaatgaagcc 141601 Query: 308 aatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggctt 367 ||||||||||||||| || | | ||| || |||||||| |||||||| || || || || Sbjct: 141602 aatctccctgagcttctcaggatcgaccacattgcgcccatcgaagacaaatgcaggttt 141661 Query: 368 ctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcag 427 ||||||||||| |||||| |||||||||||| ||||||||||| |||||| || || Sbjct: 141662 ctgcatgttgtcaaagatcctctggtagtccaaggtcttgaactcgtcccactcagtgag 141721 Query: 428 gatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctg 487 |||||||| ||||||| |||||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 141722 gatgcacagtccatgggctcccttggtggcctcatacgcatcccagaccacactcacctg 141781 Query: 488 ctt 490 ||| Sbjct: 141782 ctt 141784
>dbj|AK105768.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E05, full insert sequence Length = 1865 Score = 260 bits (131), Expect = 4e-66 Identities = 215/243 (88%) Strand = Plus / Minus Query: 248 cgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcc 307 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| || Sbjct: 1554 cgcgggcatgtccttgagccaggcatcaagcggcttgccgatggagtagacgatgaaccc 1495 Query: 308 aatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggctt 367 ||||||||||||| | ||||| | ||| || |||||||| || |||||||| || ||||| Sbjct: 1494 aatctccctgagcctctcggcatcgaccacattgcgcccatcaaagacgaatgcaggctt 1435 Query: 368 ctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcag 427 ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||| || Sbjct: 1434 ctgcatgttgtcaaagatcttctggtagtccaaggtcttgaactcgtcccactcggtgag 1375 Query: 428 gatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctg 487 |||||| || |||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 1374 gatgcagacaccatgggcccccttggtggcctcatatgcatcccacaccacgctcacctg 1315 Query: 488 ctt 490 ||| Sbjct: 1314 ctt 1312
>dbj|AK103919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A09, full insert sequence Length = 1774 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Minus Query: 248 cgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcc 307 |||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct: 1540 cgcgggcatgtctttgagccatgcatcaagcggcttgccgatagagtagacaatgaagcc 1481 Query: 308 aatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggctt 367 ||||||||||||||| || | | ||| || |||||||| |||||||| || || || || Sbjct: 1480 aatctccctgagcttctcaggatcgaccacattgcgcccatcgaagacaaatgcaggttt 1421 Query: 368 ctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcag 427 ||||||||||| |||||| |||||||||||| ||||||||||| |||||| || || Sbjct: 1420 ctgcatgttgtcaaagatcctctggtagtccaaggtcttgaactcgtcccactcagtgag 1361 Query: 428 gatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctg 487 |||||||| ||||||| |||||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 1360 gatgcacagtccatgggctcccttggtggcctcatacgcatcccagaccacactcacctg 1301 Query: 488 ctt 490 ||| Sbjct: 1300 ctt 1298
>dbj|AK099096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023C02, full insert sequence Length = 1824 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Minus Query: 248 cgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcc 307 |||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct: 1669 cgcgggcatgtctttgagccatgcatcaagcggcttgccgatagagtagacaatgaagcc 1610 Query: 308 aatctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggctt 367 ||||||||||||||| || | | ||| || |||||||| |||||||| || || || || Sbjct: 1609 aatctccctgagcttctcaggatcgaccacattgcgcccatcgaagacaaatgcaggttt 1550 Query: 368 ctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcag 427 ||||||||||| |||||| |||||||||||| ||||||||||| |||||| || || Sbjct: 1549 ctgcatgttgtcaaagatcctctggtagtccaaggtcttgaactcgtcccactcagtgag 1490 Query: 428 gatgcacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctg 487 |||||||| ||||||| |||||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 1489 gatgcacagtccatgggctcccttggtggcctcatacgcatcccagaccacactcacctg 1430 Query: 488 ctt 490 ||| Sbjct: 1429 ctt 1427
>gb|AY222335.1| Colocasia esculenta UDP-glucose dehydrogenase (UDPGDH) mRNA, complete cds Length = 1443 Score = 163 bits (82), Expect = 7e-37 Identities = 202/242 (83%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| ||||| || ||||| || ||||||||||||||||| || ||| Sbjct: 1430 ggcatgtccttgagccaggcatccagtggcttcccaatggagtagacaatgaaaccgatc 1371 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 ||||| ||||| || | || |||| ||||||||| || || |||||||||||||||||| Sbjct: 1370 tccctcagcttatctacattcacgatgttgcgcccatcaaacacgaaggccggcttctgc 1311 Query: 372 atgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcaggatg 431 ||||||| ||||| |||||||||| || ||||||||| | |||||| |||| |||| Sbjct: 1310 atgttgtcatagatcctctggtagtcgagagtcttgaactcatcccactctgtcaagatg 1251 Query: 432 cacacggcatgggcccccttggtggcctcgtacgcgtcccacaccacgctcacctgcttc 491 || || |||| |||||||| |||||||| || |||||||| ||| |||||||||||| Sbjct: 1250 cagacaccatgagccccctttgtggcctcataggcgtcccatgtcaccctcacctgcttc 1191 Query: 492 ac 493 || Sbjct: 1190 ac 1189
>ref|XM_468764.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1446 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1433 ggcatgtccttgagccaggcatcgagaggcttgccaatggagtagacgatgaatccaatc 1374 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 ||||| ||||| || |||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 1373 tccctcagcttctcagcgtcaaccacgttgcgcccgtcgaacacgaacgccggcttctgc 1314 Query: 372 at 373 || Sbjct: 1313 at 1312
>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete sequence Length = 97152 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Plus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 66595 ggcatgtccttgagccaggcatcgagaggcttgccaatggagtagacgatgaatccaatc 66654 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 ||||| ||||| || |||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 66655 tccctcagcttctcagcgtcaaccacgttgcgcccgtcgaacacgaacgccggcttctgc 66714 Query: 372 at 373 || Sbjct: 66715 at 66716
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 101 bits (51), Expect = 2e-18 Identities = 156/191 (81%) Strand = Plus / Plus Query: 249 gcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagcca 308 |||||||||||| ||||||| |||||||||||||||||||||||||| | |||||| Sbjct: 44755 gcgggcatgtccctgagccagtggtcgagcggcttgccgatggagtagacgacgaagccg 44814 Query: 309 atctccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttc 368 || | ||||||||| | || |||||||||||| |||||||||| |||||||||||| Sbjct: 44815 atgcggcggagcttgtccgggtcgacgacgttgcggccgtcgaagaggaaggccggcttg 44874 Query: 369 tgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggtcagg 428 |||||| || | | ||| ||||||||| ||| |||||||| ||||||||| ||| Sbjct: 44875 tgcatggcgtcgtacatccgctggtagtcgagccggcggaactcgtcccactcggtgagg 44934 Query: 429 atgcacacggc 439 ||||| ||||| Sbjct: 44935 atgcagacggc 44945
>gb|AF053973.1| Populus tremula x Populus tremuloides UDP-glucose dehydrogenase gene (ugdh), complete cds Length = 1824 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 243 gcgatcgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatg 302 ||||| || ||||||||||||||||| ||||| || ||||| || |||||||| |||||| Sbjct: 1519 gcgatggcaggcatgtccttgagccatgcatccagtggcttaccaatggagtacacaatg 1460 Query: 303 aagccaatctccctgagctt 322 || ||||||||||||||||| Sbjct: 1459 aaaccaatctccctgagctt 1440
>gb|AY466400.1| Populus tomentosa UDP-glucose dehydrogenase (ugdh) mRNA, complete cds Length = 1819 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 243 gcgatcgcgggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatg 302 ||||| || ||||||||||||||||| ||||| || ||||| || |||||||| |||||| Sbjct: 1519 gcgatggcaggcatgtccttgagccatgcatccagtggcttaccaatggagtacacaatg 1460 Query: 303 aagccaatctccctgagctt 322 || ||||||||||| ||||| Sbjct: 1459 aaaccaatctccctcagctt 1440
>ref|NM_001035715.1| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript variant AT3G29360.2 mRNA, complete cds Length = 1790 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| | ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 1493 ggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaaccaatc 1434 Query: 312 tccctgagctt 322 ||||| ||||| Sbjct: 1433 tcccttagctt 1423 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 348 tcgaagacgaaggccggcttctgcatgttgttgaagatcttctggtagtccagctccttg 407 ||||| ||||| || || ||||||||||||| |||||||||||| | || || | |||| Sbjct: 1397 tcgaacacgaaagctggtttctgcatgttgtcaaagatcttctggaaatcaaggttcttg 1338 Query: 408 aactcgttccactcggtcaggatgca 433 ||||| | ||||||||||| |||||| Sbjct: 1337 aactcatcccactcggtcatgatgca 1312
>ref|NM_113861.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript variant AT3G29360.1 mRNA, complete cds Length = 1793 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| | ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 1496 ggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaaccaatc 1437 Query: 312 tccctgagctt 322 ||||| ||||| Sbjct: 1436 tcccttagctt 1426 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 348 tcgaagacgaaggccggcttctgcatgttgttgaagatcttctggtagtccagctccttg 407 ||||| ||||| || || ||||||||||||| |||||||||||| | || || | |||| Sbjct: 1400 tcgaacacgaaagctggtttctgcatgttgtcaaagatcttctggaaatcaaggttcttg 1341 Query: 408 aactcgttccactcggtcaggatgca 433 ||||| | ||||||||||| |||||| Sbjct: 1340 aactcatcccactcggtcatgatgca 1315
>gb|AF424576.1|AF424576 Arabidopsis thaliana AT3g29360/MUO10_6 mRNA, complete cds Length = 1793 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| | ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 1496 ggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaaccaatc 1437 Query: 312 tccctgagctt 322 ||||| ||||| Sbjct: 1436 tcccttagctt 1426 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 348 tcgaagacgaaggccggcttctgcatgttgttgaagatcttctggtagtccagctccttg 407 ||||| ||||| || || ||||||||||||| |||||||||||| | || || | |||| Sbjct: 1400 tcgaacacgaaagctggtttctgcatgttgtcaaagatcttctggaaatcaaggttcttg 1341 Query: 408 aactcgttccactcggtcaggatgca 433 ||||| | ||||||||||| |||||| Sbjct: 1340 aactcatcccactcggtcatgatgca 1315
>gb|AY088902.1| Arabidopsis thaliana clone 9930 mRNA, complete sequence Length = 1746 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| | ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 1496 ggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaaccaatc 1437 Query: 312 tccctgagctt 322 ||||| ||||| Sbjct: 1436 tcccttagctt 1426 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 348 tcgaagacgaaggccggcttctgcatgttgttgaagatcttctggtagtccagctccttg 407 ||||| ||||| || || ||||||||||||| |||||||||||| | || || | |||| Sbjct: 1400 tcgaacacgaaagctggtttctgcatgttgtcaaagatcttctggaaatcaagattcttg 1341 Query: 408 aactcgttccactcggtcaggatgca 433 ||||| | ||||||||||| |||||| Sbjct: 1340 aactcatcccactcggtcatgatgca 1315
>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10 Length = 77589 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| | ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 17029 ggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaaccaatc 17088 Query: 312 tccctgagctt 322 ||||| ||||| Sbjct: 17089 tcccttagctt 17099 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 348 tcgaagacgaaggccggcttctgcatgttgttgaagatcttctggtagtccagctccttg 407 ||||| ||||| || || ||||||||||||| |||||||||||| | || || | |||| Sbjct: 17125 tcgaacacgaaagctggtttctgcatgttgtcaaagatcttctggaaatcaaggttcttg 17184 Query: 408 aactcgttccactcggtcaggatgca 433 ||||| | ||||||||||| |||||| Sbjct: 17185 aactcatcccactcggtcatgatgca 17210
>gb|BT021126.1| Arabidopsis thaliana At3g29360 gene, complete cds Length = 1486 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| | ||||| ||||| || |||||||| |||||||| |||||| Sbjct: 1443 ggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaaccaatc 1384 Query: 312 tccctgagctt 322 ||||| ||||| Sbjct: 1383 tcccttagctt 1373 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 348 tcgaagacgaaggccggcttctgcatgttgttgaagatcttctggtagtccagctccttg 407 ||||| ||||| || || ||||||||||||| |||||||||||| | || || | |||| Sbjct: 1347 tcgaacacgaaagctggtttctgcatgttgtcaaagatcttctggaaatcaaggttcttg 1288 Query: 408 aactcgttccactcggtcaggatgca 433 ||||| | ||||||||||| |||||| Sbjct: 1287 aactcatcccactcggtcatgatgca 1262
>ref|NM_123294.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT5G39320 mRNA, complete cds Length = 1763 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| | || || ||||| || |||||||| |||||||| |||||| Sbjct: 1503 ggcatgtccttgagccatgggtcaagtggcttaccaatggagtaaacaatgaaaccaatc 1444 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 || || | ||||| | || | | ||| | |||||||||| || ||||| |||||| Sbjct: 1443 tctcttaacttgttaacattcataatgtttcttccgtcgaagataaaagccggtttctgc 1384 Query: 372 atgttgttgaagatcttctggta 394 ||||||| ||||||||||||||| Sbjct: 1383 atgttgtcgaagatcttctggta 1361
>gb|BT013548.1| Lycopersicon esculentum clone 132272F, mRNA sequence Length = 1845 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| ||||| || ||||| || || |||||||| || || |||||| Sbjct: 1613 ggcatgtccttgagccaagcatccagaggcttaccaattgagtagactataaatccaatc 1554 Query: 312 tccctgagctt 322 ||||| ||||| Sbjct: 1553 tccctaagctt 1543
>gb|BT006380.1| Arabidopsis thaliana At5g39320 gene, complete cds Length = 1440 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| | || || ||||| || |||||||| |||||||| |||||| Sbjct: 1427 ggcatgtccttgagccatgggtcaagtggcttaccaatggagtaaacaatgaaaccaatc 1368 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 || || | ||||| | || | | ||| | |||||||||| || ||||| |||||| Sbjct: 1367 tctcttaacttgttaacattcataatgtttcttccgtcgaagataaaagccggtttctgc 1308 Query: 372 atgttgttgaagatcttctggta 394 ||||||| ||||||||||||||| Sbjct: 1307 atgttgtcgaagatcttctggta 1285
>dbj|AB009054.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUL8 Length = 83450 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||||||||||||||| | || || ||||| || |||||||| |||||||| |||||| Sbjct: 308 ggcatgtccttgagccatgggtcaagtggcttaccaatggagtaaacaatgaaaccaatc 249 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 || || | ||||| | || | | ||| | |||||||||| || ||||| |||||| Sbjct: 248 tctcttaacttgttaacattcataatgtttcttccgtcgaagataaaagccggtttctgc 189 Query: 372 atgttgttgaagatcttctggta 394 ||||||| ||||||||||||||| Sbjct: 188 atgttgtcgaagatcttctggta 166
>ref|NM_121553.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT5G15490 mRNA, complete cds Length = 1778 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 |||||||||||||||||| || | ||||| || |||||||| ||||| || |||||| Sbjct: 1532 ggcatgtccttgagccactggtccaatggcttaccaatggagtaaacaataaacccaatc 1473 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 |||||||| || || |||| ||| ||||| | ||||| || || || ||||| |||||| Sbjct: 1472 tccctgagtttatcagcgtcgaccacgtttctaccgtcaaaaacaaaagccggtttctgc 1413 Query: 372 atgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggt 424 || || | |||||| |||| | || || | ||||||||||| ||||||||| Sbjct: 1412 atattctcaaagatccgctggaaatcaagtttcttgaactcgtcccactcggt 1360
>gb|BT015794.1| Arabidopsis thaliana At5g15490 mRNA, complete cds Length = 1443 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 |||||||||||||||||| || | ||||| || |||||||| ||||| || |||||| Sbjct: 1430 ggcatgtccttgagccactggtccaatggcttaccaatggagtaaacaataaacccaatc 1371 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 |||||||| || || |||| ||| ||||| | ||||| || || || ||||| |||||| Sbjct: 1370 tccctgagtttatcagcgtcgaccacgtttctaccgtcaaaaacaaaagccggtttctgc 1311 Query: 372 atgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggt 424 || || | |||||| |||| | || || | ||||||||||| ||||||||| Sbjct: 1310 atattctcaaagatccgctggaaatcaagtttcttgaactcgtcccactcggt 1258
>gb|AY056200.1| Arabidopsis thaliana putative UDP-glucose dehydrogenase (At5g15490) mRNA, complete cds Length = 1793 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 |||||||||||||||||| || | ||||| || |||||||| ||||| || |||||| Sbjct: 1532 ggcatgtccttgagccactggtccaatggcttaccaatggagtaaacaataaacccaatc 1473 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 |||||||| || || |||| ||| ||||| | ||||| || || || ||||| |||||| Sbjct: 1472 tccctgagtttatcagcgtcgaccacgtttctaccgtcaaaaacaaaagccggtttctgc 1413 Query: 372 atgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggt 424 || || | |||||| |||| | || || | ||||||||||| ||||||||| Sbjct: 1412 atattctcaaagatccgctggaaatcaagtttcttgaactcgtcccactcggt 1360
>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA project) Length = 90176 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 |||||||||||||||||| || | ||||| || |||||||| ||||| || |||||| Sbjct: 33663 ggcatgtccttgagccactggtccaatggcttaccaatggagtaaacaataaacccaatc 33722 Query: 312 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 371 |||||||| || || |||| ||| ||||| | ||||| || || || ||||| |||||| Sbjct: 33723 tccctgagtttatcagcgtcgaccacgtttctaccgtcaaaaacaaaagccggtttctgc 33782 Query: 372 atgttgttgaagatcttctggtagtccagctccttgaactcgttccactcggt 424 || || | |||||| |||| | || || | ||||||||||| ||||||||| Sbjct: 33783 atattctcaaagatccgctggaaatcaagtttcttgaactcgtcccactcggt 33835
>gb|AY619948.1| Nicotiana tabacum putative UDP-glucose dehydrogenase 1 mRNA, complete cds Length = 1823 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagac 298 ||||||||||||||||| ||||| |||||||| || || |||||||| Sbjct: 1518 ggcatgtccttgagccaggcatccagcggcttaccaattgagtagac 1472
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 407 gaactcgttccactcggtcaggat 430 |||||||||||||||||||||||| Sbjct: 2391297 gaactcgttccactcggtcaggat 2391320
>gb|AY619949.1| Nicotiana tabacum putative UDP-glucose dehydrogenase 2 mRNA, complete cds Length = 1768 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagac 298 ||||||||||||||||| ||||| ||||| || || || |||||||| Sbjct: 1509 ggcatgtccttgagccaggcatccagcggtttaccaattgagtagac 1463
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 404 cttgaactcgttccactcggtcaggat 430 ||||||||||| ||||||||||||||| Sbjct: 11422 cttgaactcgtcccactcggtcaggat 11448
>ref|NM_102419.3| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT1G26570 mRNA, complete cds Length = 1712 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||| ||||||||||| | ||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 1552 ggcatatccttgagccatgaatcaagcggtttaccaatggagtagacgatgaaaccgatc 1493 Query: 312 tc 313 || Sbjct: 1492 tc 1491
>gb|AC135957.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037P02 map E61794SA, complete sequence Length = 131645 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 aagctcattggatacaaataaa 57 |||||||||||||||||||||| Sbjct: 44729 aagctcattggatacaaataaa 44750
>gb|AY496079.1| Cinnamomum osmophloeum UDP-glucose dehydrogenase (UDPGDH) mRNA, complete cds Length = 1443 Score = 44.1 bits (22), Expect = 0.44 Identities = 70/86 (81%) Strand = Plus / Minus Query: 342 cgcccgtcgaagacgaaggccggcttctgcatgttgttgaagatcttctggtagtccagc 401 |||||||| || || || |||||||||||||| || | | | ||||||||||| || || Sbjct: 1340 cgcccgtcaaacacaaacgccggcttctgcatattatcgtatatcttctggtaatcaaga 1281 Query: 402 tccttgaactcgttccactcggtcag 427 |||||||||| | |||||| ||||| Sbjct: 1280 gccttgaactcatcccactcagtcag 1255
>gb|AY143922.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds Length = 1446 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||| ||||||||||| | ||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 1433 ggcatatccttgagccatgaatcaagcggtttaccaatggagtagacgatgaaaccgatc 1374 Query: 312 tc 313 || Sbjct: 1373 tc 1372
>emb|AL606464.11| Mouse DNA sequence from clone RP23-462P2 on chromosome 13 Contains the 3' end of the Slc17a1 gene for solute carrier family 17 vesicular glutamate transporter) member 1, the gene for a novel solute carrier family 17 (Slc17a) member, a U1 small nuclear ribonucleoprotein 1C (Snrp1c) pseudogene, a H2B histone family (H2b) pseudogene, the gene for a novel H2A histone family (H2a) member, a novel gene, the gene for the ortholog of human secretagogin, EF-hand calcium binding protein SCGN and the 3' end of a novel gene, complete sequence Length = 183698 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 42 attggatacaaataaacattct 63 |||||||||||||||||||||| Sbjct: 94182 attggatacaaataaacattct 94203
>gb|AY070758.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds Length = 1707 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||| ||||||||||| | ||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 1551 ggcatatccttgagccatgaatcaagcggtttaccaatggagtagacgatgaaaccgatc 1492 Query: 312 tc 313 || Sbjct: 1491 tc 1490
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 aagctcattggatacaaataaa 57 |||||||||||||||||||||| Sbjct: 9491546 aagctcattggatacaaataaa 9491567
>emb|BX816266.1|CNS0ABUF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 353 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||| ||||||||||| | ||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 193 ggcatatccttgagccatgaatcaagcggtttaccaatggagtagacgatgaaaccgatc 134 Query: 312 tc 313 || Sbjct: 133 tc 132
>emb|BX817654.1|CNS0AAWE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL35ZE02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 647 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||| ||||||||||| | ||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 487 ggcatatccttgagccatgaatcaagcggtttaccaatggagtagacgatgaaaccgatc 428 Query: 312 tc 313 || Sbjct: 427 tc 426
>emb|BX814676.1|CNS0AAJL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1649 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||| ||||||||||| | ||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 1538 ggcatatccttgagccatgaatcaagcggtttaccaatggagtagacgatgaaaccgatc 1479 Query: 312 tc 313 || Sbjct: 1478 tc 1477
>gb|AY084436.1| Arabidopsis thaliana clone 108221 mRNA, complete sequence Length = 1706 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||| ||||||||||| | ||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 1550 ggcatatccttgagccatgaatcaagcggtttaccaatggagtagacgatgaaaccgatc 1491 Query: 312 tc 313 || Sbjct: 1490 tc 1489
>gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis thaliana chromosome 1, complete sequence Length = 89473 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 252 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 311 ||||| ||||||||||| | ||| ||||| || || ||||||||||| ||||| || ||| Sbjct: 16210 ggcatatccttgagccatgaatcaagcggtttaccaatggagtagacgatgaaaccgatc 16269 Query: 312 tc 313 || Sbjct: 16270 tc 16271
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 aagctcattggatacaaataaa 57 |||||||||||||||||||||| Sbjct: 9563243 aagctcattggatacaaataaa 9563264
>ref|NM_000232.3| Homo sapiens sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA Length = 4229 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 caaataaacattcttttacaa 70 ||||||||||||||||||||| Sbjct: 1558 caaataaacattcttttacaa 1538
>gb|AC114459.6| Rattus norvegicus 4 BAC CH230-388N23 (Children's Hospital Oakland Research Institute) complete sequence Length = 190345 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 attcttttacaatcctcaaaacagc 83 ||||||||| ||||||||||||||| Sbjct: 65421 attcttttataatcctcaaaacagc 65445
>gb|AC069208.24| Homo sapiens 12 BAC RP11-778H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167182 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 agagggaaaaagtgggaacaa 23 ||||||||||||||||||||| Sbjct: 128794 agagggaaaaagtgggaacaa 128774
>gb|AC156244.2| Xenopus tropicalis clone CH216-92I18, complete sequence Length = 140675 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 tcttttacaatcctcaaaaca 81 ||||||||||||||||||||| Sbjct: 124794 tcttttacaatcctcaaaaca 124774
>gb|AC117413.2| Homo sapiens 3 BAC RP11-51I4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 21688 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 aaaaagtgggaacaatcaaat 29 ||||||||||||||||||||| Sbjct: 20702 aaaaagtgggaacaatcaaat 20682
>emb|CR594277.1| full-length cDNA clone CS0DB008YL14 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 2615 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 caaataaacattcttttacaa 70 ||||||||||||||||||||| Sbjct: 1297 caaataaacattcttttacaa 1277
>gb|AC016817.6| Homo sapiens chromosome 10 clone RP11-13G8, complete sequence Length = 159981 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 attggatacaaataaacattc 62 ||||||||||||||||||||| Sbjct: 76559 attggatacaaataaacattc 76579
>gb|AC016920.14| Homo sapiens 3 BAC RP11-203L15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142127 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 aaaaagtgggaacaatcaaat 29 ||||||||||||||||||||| Sbjct: 1015 aaaaagtgggaacaatcaaat 995
>gb|AC093858.2| Homo sapiens BAC clone RP11-535C7 from 4, complete sequence Length = 151113 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 caaataaacattcttttacaa 70 ||||||||||||||||||||| Sbjct: 13379 caaataaacattcttttacaa 13399
>emb|BX248396.10| Zebrafish DNA sequence from clone CH211-219M13, complete sequence Length = 196673 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 aagccaatctccctgagcttg 323 ||||||||||||||||||||| Sbjct: 25789 aagccaatctccctgagcttg 25809
>dbj|AK026238.1| Homo sapiens cDNA: FLJ22585 fis, clone HSI02678 Length = 2037 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 agagggaaaaagtgggaacaa 23 ||||||||||||||||||||| Sbjct: 492 agagggaaaaagtgggaacaa 472
>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21, complete sequence Length = 253718 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 aataaacattcttttacaatc 72 ||||||||||||||||||||| Sbjct: 168124 aataaacattcttttacaatc 168144
>gb|U31116.1|HSU31116 Human beta-sarcoglycan A3b mRNA, complete cds Length = 2037 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 caaataaacattcttttacaa 70 ||||||||||||||||||||| Sbjct: 1579 caaataaacattcttttacaa 1559
>emb|Y09781.1|HSY09781 H.sapiens beta-sarcoglycan gene Length = 36159 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 caaataaacattcttttacaa 70 ||||||||||||||||||||| Sbjct: 21836 caaataaacattcttttacaa 21816
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 tccttgagccacgcatcgagcggc 281 |||||||||||||| ||||||||| Sbjct: 197631 tccttgagccacgcctcgagcggc 197608
>gb|L78833.1| Homo sapiens BRCA1 (BRCA1) gene, complete cds; ribosomal protein L21-like protein (rpL21) pseudogene, complete sequence; Rho7 (Rho7) and VatI (VatI) genes, complete cds; and unknown (ifp35) gene, exons 1 through 3 and partial cds Length = 117143 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 55495 aaattgctataagctcattg 55514
>gb|AF357009.1|AF357008S2 Drosophila melanogaster 5.9 kb tandem repeat sequence, proximal region Length = 3547 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 cgttgacgacgttgcgcccgtcga 351 |||||||||||||||||| ||||| Sbjct: 1597 cgttgacgacgttgcgcctgtcga 1620
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cgcatcgagcggcttgccga 288 |||||||||||||||||||| Sbjct: 2162214 cgcatcgagcggcttgccga 2162195
>ref|XM_658107.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5595.2), mRNA Length = 2826 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 cggcttctgcatgttgttga 381 |||||||||||||||||||| Sbjct: 1477 cggcttctgcatgttgttga 1458
>gb|DQ478408.1| Homo sapiens neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; neighbor of BRCA1 gene 2 (NBR2) gene, complete cds; and early onset breast cancer 1 (BRCA1) gene, partial cds Length = 150505 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 124320 aaattgctataagctcattg 124339
>gb|DQ190457.1| Homo sapiens clone mck41_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; hypothetical protein LOC10230 (NBR2) gene, complete cds; and breast cancer 1 early onset (BRCA1) gene, partial cds Length = 147576 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 121384 aaattgctataagctcattg 121403
>gb|DQ190456.1| Homo sapiens clone mck578_U neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 150669 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 121424 aaattgctataagctcattg 121443
>gb|DQ190455.1| Homo sapiens clone mck554_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 155470 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 123989 aaattgctataagctcattg 124008
>gb|DQ190454.1| Homo sapiens clone mck43_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 150582 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 116843 aaattgctataagctcattg 116862
>gb|DQ190453.1| Homo sapiens clone mck55_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 156879 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 122689 aaattgctataagctcattg 122708
>gb|DQ190452.1| Homo sapiens clone mck94_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 156121 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 120326 aaattgctataagctcattg 120345
>gb|DQ190451.1| Homo sapiens clone mck47_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 161765 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 120395 aaattgctataagctcattg 120414
>gb|DQ190450.1| Homo sapiens clone mck432_A neighbor of BRCA1 gene 1 (NBR1) gene, partial cds; and hypothetical protein LOC10230 (NBR2) and breast cancer 1 early onset (BRCA1) genes, complete cds Length = 167910 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 121271 aaattgctataagctcattg 121290
>ref|XM_747336.1| Aspergillus fumigatus Af293 S-adenosylmethionine synthetase (Afu1g10630) partial mRNA Length = 1164 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gatcttctggtagtccagct 402 |||||||||||||||||||| Sbjct: 222 gatcttctggtagtccagct 203
>gb|AC121596.3| Mus musculus BAC clone RP23-299I20 from 14, complete sequence Length = 203897 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aaggattgaggaacatgtat 105 |||||||||||||||||||| Sbjct: 151448 aaggattgaggaacatgtat 151429
>gb|AC074397.7| Homo sapiens BAC clone RP11-598O8 from 7, complete sequence Length = 114576 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gggaacaatcaaattgctat 35 |||||||||||||||||||| Sbjct: 80174 gggaacaatcaaattgctat 80155
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 tccttgagccacgcatcgagcggc 281 |||||||||||||| ||||||||| Sbjct: 939397 tccttgagccacgcttcgagcggc 939374
>gb|AC092003.3| Felis catus clone RP86-137F8, complete sequence Length = 157615 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 cctgcagctcctgtggagag 235 |||||||||||||||||||| Sbjct: 35397 cctgcagctcctgtggagag 35416
>emb|AL109944.19|HSJ737A23 Human DNA sequence from clone RP4-737A23 on chromosome 1p31.2-32.1 Contains part of the DAB1 gene for disabled homolog 1 (Drosophila) and two novel genes, complete sequence Length = 140373 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 caattttatgcctgactgaa 182 |||||||||||||||||||| Sbjct: 25744 caattttatgcctgactgaa 25725
>emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 11/11 Length = 307337 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 tgttgttgaagatcttctgg 392 |||||||||||||||||||| Sbjct: 161401 tgttgttgaagatcttctgg 161420
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cgcatcgagcggcttgccga 288 |||||||||||||||||||| Sbjct: 323842 cgcatcgagcggcttgccga 323823
>gb|AC161606.5| Mus musculus BAC clone RP23-232M18 from chromosome 14, complete sequence Length = 223037 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aaggattgaggaacatgtat 105 |||||||||||||||||||| Sbjct: 124464 aaggattgaggaacatgtat 124483
>emb|BX294135.1| Pirellula sp. strain 1 complete genome; segment 3/24 Length = 340750 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 338 gttgcgcccgtcgaagacgaaggccggcttct 369 |||||||||||| || |||||||| ||||||| Sbjct: 310037 gttgcgcccgtcaaatacgaaggctggcttct 310006
>gb|AC117377.9| Homo sapiens 12 BAC RP11-406H4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107100 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 caaataaacattcttttaca 69 |||||||||||||||||||| Sbjct: 744 caaataaacattcttttaca 763
>gb|AC126616.4| Homo sapiens 12 BAC RP11-149L3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 14790 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 caaataaacattcttttaca 69 |||||||||||||||||||| Sbjct: 13510 caaataaacattcttttaca 13529
>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence Length = 149005 Score = 40.1 bits (20), Expect = 6.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 363 ggcttctgcatgttgttgaagatcttctggtagtccagctccttgaactcgttccactcg 422 |||||||||||||||| || | || ||||| || || | ||||||||||| ||||||| Sbjct: 70710 ggcttctgcatgttgtcaaaaactttttggtaatcaaggttcttgaactcgtcccactcg 70651 Query: 423 gtca 426 |||| Sbjct: 70650 gtca 70647
>gb|AC090132.3| Homo sapiens chromosome 8, clone RP11-813B8, complete sequence Length = 205004 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cctgtggagaggaactaggc 244 |||||||||||||||||||| Sbjct: 34195 cctgtggagaggaactaggc 34214
>gb|AC022821.9| Homo sapiens chromosome 8, clone RP11-51M18, complete sequence Length = 171721 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cctgtggagaggaactaggc 244 |||||||||||||||||||| Sbjct: 162568 cctgtggagaggaactaggc 162587
>gb|AC148296.3| Pan troglodytes BAC clone CH251-545I16 from chromosome 7, complete sequence Length = 187553 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cctgtggagaggaactaggc 244 |||||||||||||||||||| Sbjct: 115725 cctgtggagaggaactaggc 115706
>emb|BX649643.10| Zebrafish DNA sequence from clone CH211-125M10 in linkage group 22, complete sequence Length = 177325 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 ggaaaaagtgggaacaatca 26 |||||||||||||||||||| Sbjct: 72059 ggaaaaagtgggaacaatca 72078
>gb|AY273801.1| Homo sapiens breast cancer 1, early onset (BRCA1) gene, complete cds Length = 82899 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 53114 aaattgctataagctcattg 53133
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 cgcatcgagcggcttgccga 288 |||||||||||||||||||| Sbjct: 2000805 cgcatcgagcggcttgccga 2000824
>gb|AC009850.10|AC009850 Drosophila melanogaster, chromosome 2R, region 55E-55F, BAC clone BACR27L09, complete sequence Length = 173059 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 ggaaaaagtgggaacaatca 26 |||||||||||||||||||| Sbjct: 158473 ggaaaaagtgggaacaatca 158454
>gb|AC136785.1| Homo sapiens BAC clone RP11-124C9 from 4, complete sequence Length = 26713 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaataaacattcttttacaa 70 |||||||||||||||||||| Sbjct: 7165 aaataaacattcttttacaa 7184
>gb|AC154686.2| Mus musculus BAC clone RP24-327C20 from chromosome 14, complete sequence Length = 181382 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 tgcatgttgttgaagatctt 388 |||||||||||||||||||| Sbjct: 129294 tgcatgttgttgaagatctt 129313
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gaactcgttccactcggtca 426 |||||||||||||||||||| Sbjct: 4951136 gaactcgttccactcggtca 4951117
>gb|AY158943.1| Mus musculus histone protein Hist3h2bb gene, complete cds Length = 1378 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 tgggcccccttggtggcctc 460 |||||||||||||||||||| Sbjct: 1177 tgggcccccttggtggcctc 1196
>gb|AC135721.4| Homo sapiens, clone CTD-3199J23, complete sequence Length = 150472 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattgctataagctcattg 45 |||||||||||||||||||| Sbjct: 86184 aaattgctataagctcattg 86203
>gb|AE003799.4| Drosophila melanogaster chromosome 2R, section 51 of 73 of the complete sequence Length = 316981 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 ggaaaaagtgggaacaatca 26 |||||||||||||||||||| Sbjct: 310827 ggaaaaagtgggaacaatca 310808
>gb|AC005971.5|AC005971 Homo sapiens chromosome 17, clone hRPK.651_L_9, complete sequence Length = 192307 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gaaaaagtgggaacaatcaa 27 |||||||||||||||||||| Sbjct: 182190 gaaaaagtgggaacaatcaa 182209
>gb|AC169080.4| Erinaceus europaeus, clone XX-29441557E23, complete sequence Length = 33903 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 cacctgcttcacagatgatg 501 |||||||||||||||||||| Sbjct: 26724 cacctgcttcacagatgatg 26705
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 cgcatcgagcggcttgccga 288 |||||||||||||||||||| Sbjct: 2635426 cgcatcgagcggcttgccga 2635445
>gb|AF100956.1|AF100956 Mus musculus major histocompatibility locus class II region; Fas-binding protein Daxx (DAXX) gene, partial cds; Bing1 (BING1), tapasin (tapasin), RalGDS-like factor (RLF), KE2 (KE2), BING4 (BING4), beta1, 3-galactosyl transferase (beta1,3-galactosyl transferase), ribosomal protein subunit S18 (RPS18), Sacm21 (Sacm21), H2K1(b) (H2-K1(b)), RING1 (RING1), KE6a (KE6a), KE4 (KE4), RXRbeta (RXRbeta), collagen alpha-2 (XI) (COLA11A2), H2-O alpha (H2-Oalpha), RING3 (RING3), H2-M alpha (H2-M alpha), H2-M beta 2 (H2-M beta2), and H2-M beta1 (H2-M beta1) genes, complete cds; and LMP 2 gene, partial cds Length = 273800 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cctgtggagaggaactaggc 244 |||||||||||||||||||| Sbjct: 260776 cctgtggagaggaactaggc 260795
>emb|CR974422.14| Mouse DNA sequence from clone RP23-123G8 on chromosome 17, complete sequence Length = 189049 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cctgtggagaggaactaggc 244 |||||||||||||||||||| Sbjct: 41259 cctgtggagaggaactaggc 41278
>emb|AJ009616.3|HSAJ9616 Homo sapiens chromosome 17 sequence from PAC RP1-188B3 region D17S842-D17S953 map 17p11.2, complete sequence Length = 81514 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gaaaaagtgggaacaatcaa 27 |||||||||||||||||||| Sbjct: 55919 gaaaaagtgggaacaatcaa 55938
>emb|AL935193.9| Zebrafish DNA sequence from clone CH211-209H11, complete sequence Length = 208059 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 acaatgaagccaatctccct 316 |||||||||||||||||||| Sbjct: 45955 acaatgaagccaatctccct 45974
>gb|CP000170.1| Drosophila melanogaster genomic scaffold 211000022279294 Length = 79135 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 cgttgacgacgttgcgcccgtcga 351 |||||||||||||||||| ||||| Sbjct: 5766 cgttgacgacgttgcgcctgtcga 5789
>gb|AF027865.1|MMMMH461 Mus musculus Major Histocompatibility Locus class II region Length = 138187 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cctgtggagaggaactaggc 244 |||||||||||||||||||| Sbjct: 8998 cctgtggagaggaactaggc 9017
>emb|AL662809.14| Mouse DNA sequence from clone RP23-441I8 on chromosome 11, complete sequence Length = 103129 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 tgggcccccttggtggcctc 460 |||||||||||||||||||| Sbjct: 38224 tgggcccccttggtggcctc 38205
>emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chromosome 4, complete sequence Length = 202412 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 caatgaagccaatctccctgagct 321 |||| ||||||||||||||||||| Sbjct: 88570 caataaagccaatctccctgagct 88547
>gb|U35323.1|MMU35323 Mus musculus H2-M alpha chain (H2-Ma) gene, H2-M beta 2 chain (H2-Mb2) gene, H2-M beta 1 chain (H2-Mb1) gene, low molecular weight protein 2 Lmp2 (Lmp2) gene, complete cds Length = 53419 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cctgtggagaggaactaggc 244 |||||||||||||||||||| Sbjct: 39450 cctgtggagaggaactaggc 39469
>emb|AL627105.13| Mouse DNA sequence from clone RP23-383D12 on chromosome 4, complete sequence Length = 190882 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 tgggcccccttggtggcctc 460 |||||||||||||||||||| Sbjct: 42522 tgggcccccttggtggcctc 42503
>emb|AL645666.10| Mouse DNA sequence from clone RP23-356E21 on chromosome 4, complete sequence Length = 155103 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 caattttatgcctgactgaa 182 |||||||||||||||||||| Sbjct: 52191 caattttatgcctgactgaa 52210 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,471,538 Number of Sequences: 3902068 Number of extensions: 4471538 Number of successful extensions: 87443 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 86579 Number of HSP's gapped (non-prelim): 836 length of query: 513 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 490 effective length of database: 17,143,297,704 effective search space: 8400215874960 effective search space used: 8400215874960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
