ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart45b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY109990.1| Zea mays CL24131_1 mRNA sequence 139 1e-29
2ref|XM_550285.1| Oryza sativa (japonica cultivar-group), mRNA 129 9e-27
3dbj|AK060343.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
5dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
7dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
8dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
9gb|AF372833.1|AF372833 Oryza sativa phosphoenolpyruvate/phosphat... 72 2e-09
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
11dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
12dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
13dbj|AK071036.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
14ref|XM_481795.1| Oryza sativa (japonica cultivar-group), mRNA 70 7e-09
15dbj|AK066618.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
16dbj|AK059591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
17gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 68 3e-08
18dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
19gb|AY326794.1| Chlamydomonas reinhardtii putative phosphate/phos... 60 7e-06
20gb|AY104580.1| Zea mays PCO071161 mRNA sequence 54 4e-04
21gb|U66404.1|ZMU66404 Zea mays plastid phosphate/phosphoenolpyruv... 54 4e-04
22gb|U66403.1|ZMU66403 Zea mays plastid phosphate/phosphoenolpyruv... 54 4e-04
23gb|U66401.1|NTU66401 Nicotiana tabacum plastid phosphate/phospho... 52 0.002
24gb|AY177787.1| Chlamydomonas reinhardtii putative phosphate/phos... 48 0.027
25gb|U13632.1|BOU13632 Brassica oleracea var. botrytis non-green p... 48 0.027
26gb|U66402.1|NTU66402 Nicotiana tabacum plastid phosphate/phospho... 44 0.42
27gb|BT012715.1| Lycopersicon esculentum clone 113597F, mRNA sequence 42 1.7
28gb|AC008791.5| Homo sapiens chromosome 5 clone CITB-H1_2040J22, ... 42 1.7
29gb|AC016614.6|AC016614 Homo sapiens chromosome 5 clone CTD-2217F... 42 1.7
30gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 6.6
31gb|BC051097.1| Mus musculus FERM and PDZ domain containing 1, mR... 40 6.6
32gb|BC046469.1| Mus musculus FERM and PDZ domain containing 1, mR... 40 6.6
33gb|BC031840.1| Mus musculus FERM and PDZ domain containing 1, mR... 40 6.6
34ref|XM_975997.1| PREDICTED: Mus musculus similar to FERM and PDZ... 40 6.6
35ref|XM_976029.1| PREDICTED: Mus musculus similar to FERM and PDZ... 40 6.6
36ref|XM_976433.1| PREDICTED: Mus musculus similar to FERM and PDZ... 40 6.6
37ref|XM_976475.1| PREDICTED: Mus musculus similar to FERM and PDZ... 40 6.6
38ref|XM_898920.2| PREDICTED: Mus musculus similar to FERM and PDZ... 40 6.6
39ref|XM_204152.5| PREDICTED: Mus musculus similar to FERM and PDZ... 40 6.6
40gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold 40 6.6
41gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 6.6
42gb|AC157915.4| Mus musculus chromosome 19, clone RP24-294L7, com... 40 6.6
43emb|AL162757.2|NMA6Z2491 Neisseria meningitidis serogroup A stra... 40 6.6
44emb|AJ391256.1|NME391256 Neisseria meningitidis DNA for region 3... 40 6.6
45dbj|AK133351.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.6
46gb|AC055738.16| Homo sapiens 3 BAC RP11-234G11 (Roswell Park Can... 40 6.6
47gb|AC137157.3| Mus musculus BAC clone RP23-377M11 from chromosom... 40 6.6
48gb|AC105061.16| Mus musculus chromosome 19, clone RP23-117I10, c... 40 6.6
49ref|XM_233002.3| PREDICTED: Rattus norvegicus FERM and PDZ domai... 40 6.6
50dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
51emb|AL121841.5|CNS01DSS Human chromosome 14 DNA sequence BAC R-8... 40 6.6
52emb|AL049831.2|CNS00008 Human chromosome 14 DNA sequence BAC R-3... 40 6.6
53dbj|AK122409.1| Mus musculus mRNA for mKIAA0967 protein 40 6.6
54gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 6.6
55gb|AC142410.4| Mus musculus BAC clone RP24-173I18 from 1, comple... 40 6.6
56gb|AC124516.4| Mus musculus BAC clone RP23-387C9 from 12, comple... 40 6.6
57emb|AL772285.9| Mouse DNA sequence from clone RP23-76I24 on chro... 40 6.6
58emb|AL627123.13| Mouse DNA sequence from clone RP23-351I23 on ch... 40 6.6 
>gb|AY109990.1| Zea mays CL24131_1 mRNA sequence
          Length = 605

 Score =  139 bits (70), Expect = 1e-29
 Identities = 163/194 (84%)
 Strand = Plus / Plus

                                                                       
Query: 288 gcaccagtccccagtgcattgacaggggagatgggcgtccggaagaagaggacggaagag 347
           |||||||| || |||||||||||||| || || || || | |||||| || ||||| |||
Sbjct: 216 gcaccagttcctagtgcattgacaggcgaaataggtgtgctgaagaacagaacggaggag 275

                                                                       
Query: 348 acgatgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctc 407
           ||||| || ||||| ||||| ||||||||||| |||||||| ||||| |||||||| |||
Sbjct: 276 acgatcacaaccacacgctttacgcagttggcgacggagtgtgtcactggcgacactctc 335

                                                                       
Query: 408 gccaggatcatgtacgacagcttctggtagccatggaagcagaggccggccagtgccgcc 467
           | || ||||| |||||| |||||||| |||||||||||||| || || || || || || 
Sbjct: 336 gacaagatcaagtacgagagcttctgatagccatggaagcacagacctgcgagcgctgct 395

                         
Query: 468 ctcacgcacagctc 481
           ||||||||||||||
Sbjct: 396 ctcacgcacagctc 409
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>ref|XM_550285.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1652

 Score =  129 bits (65), Expect = 9e-27
 Identities = 185/225 (82%)
 Strand = Plus / Minus

                                                                        
Query: 257  cctggagtacaggtaaactcccgccagtgctgcaccagtccccagtgcattgacagggga 316
            |||||| |||||| |||||||  ||| |||  ||||||| || |||||||||||||| ||
Sbjct: 1375 cctggaatacaggaaaactcctcccaatgcaacaccagttcctagtgcattgacaggtga 1316

                                                                        
Query: 317  gatgggcgtccggaagaagaggacggaagagacgatgaccaccactcgcttgacgcagtt 376
             || || || | ||||||||| || || |  |||||||| ||||| ||||||||||||||
Sbjct: 1315 aattggggttctgaagaagagaacagacgccacgatgacgaccacacgcttgacgcagtt 1256

                                                                        
Query: 377  ggccacggagtgggtcacgggcgacaccctcgccaggatcatgtacgacagcttctggta 436
            ||| || |||||||| || || ||||| || |||||||||| ||| || |||||||||||
Sbjct: 1255 ggcgacagagtgggtgacaggtgacactctggccaggatcaagtaggagagcttctggta 1196

                                                         
Query: 437  gccatggaagcagaggccggccagtgccgccctcacgcacagctc 481
            |||||||||||| | ||| || ||||| || || || ||||||||
Sbjct: 1195 gccatggaagcaaaagccagctagtgctgctcttacacacagctc 1151
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>dbj|AK060343.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-E01, full
            insert sequence
          Length = 1652

 Score =  129 bits (65), Expect = 9e-27
 Identities = 185/225 (82%)
 Strand = Plus / Minus

                                                                        
Query: 257  cctggagtacaggtaaactcccgccagtgctgcaccagtccccagtgcattgacagggga 316
            |||||| |||||| |||||||  ||| |||  ||||||| || |||||||||||||| ||
Sbjct: 1375 cctggaatacaggaaaactcctcccaatgcaacaccagttcctagtgcattgacaggtga 1316

                                                                        
Query: 317  gatgggcgtccggaagaagaggacggaagagacgatgaccaccactcgcttgacgcagtt 376
             || || || | ||||||||| || || |  |||||||| ||||| ||||||||||||||
Sbjct: 1315 aattggggttctgaagaagagaacagacgccacgatgacgaccacacgcttgacgcagtt 1256

                                                                        
Query: 377  ggccacggagtgggtcacgggcgacaccctcgccaggatcatgtacgacagcttctggta 436
            ||| || |||||||| || || ||||| || |||||||||| ||| || |||||||||||
Sbjct: 1255 ggcgacagagtgggtgacaggtgacactctggccaggatcaagtaggagagcttctggta 1196

                                                         
Query: 437  gccatggaagcagaggccggccagtgccgccctcacgcacagctc 481
            |||||||||||| | ||| || ||||| || || || ||||||||
Sbjct: 1195 gccatggaagcaaaagccagctagtgctgctcttacacacagctc 1151
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 98/118 (83%)
 Strand = Plus / Minus

                                                                           
Query: 300     agtgcattgacaggggagatgggcgtccggaagaagaggacggaagagacgatgaccacc 359
               |||||||||||||| || || || || | ||||||||| || || |  |||||||| |||
Sbjct: 3712215 agtgcattgacaggtgaaattggggttctgaagaagagaacagacgccacgatgacgacc 3712156

                                                                         
Query: 360     actcgcttgacgcagttggccacggagtgggtcacgggcgacaccctcgccaggatca 417
               || ||||||||||||||||| || |||||||| || || ||||| || ||||||||||
Sbjct: 3712155 acacgcttgacgcagttggcgacagagtgggtgacaggtgacactctggccaggatca 3712098



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                     
Query: 428     cttctggtagccatggaagcagaggccggccagtgccgccctcacgcacagctc 481
               ||||||||||||||||||||| | ||| || ||||| || || || ||||||||
Sbjct: 3711974 cttctggtagccatggaagcaaaagccagctagtgctgctcttacacacagctc 3711921
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>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0583G08
          Length = 135295

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 98/118 (83%)
 Strand = Plus / Minus

                                                                          
Query: 300    agtgcattgacaggggagatgggcgtccggaagaagaggacggaagagacgatgaccacc 359
              |||||||||||||| || || || || | ||||||||| || || |  |||||||| |||
Sbjct: 120695 agtgcattgacaggtgaaattggggttctgaagaagagaacagacgccacgatgacgacc 120636

                                                                        
Query: 360    actcgcttgacgcagttggccacggagtgggtcacgggcgacaccctcgccaggatca 417
              || ||||||||||||||||| || |||||||| || || ||||| || ||||||||||
Sbjct: 120635 acacgcttgacgcagttggcgacagagtgggtgacaggtgacactctggccaggatca 120578



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                    
Query: 428    cttctggtagccatggaagcagaggccggccagtgccgccctcacgcacagctc 481
              ||||||||||||||||||||| | ||| || ||||| || || || ||||||||
Sbjct: 120454 cttctggtagccatggaagcaaaagccagctagtgctgctcttacacacagctc 120401
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                           
Query: 351     atgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctcgcc 410
               |||||||||||||||||||| |||||  |||| ||||| || || || ||||| || |||
Sbjct: 7168545 atgaccaccactcgcttgacacagttacccaccgagtgagtaacaggggacactcttgcc 7168604

                                    
Query: 411     aggatcatgtacgacagcttc 431
               |||||||||||||||| ||||
Sbjct: 7168605 aggatcatgtacgacaccttc 7168625



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 149      aacctactatctcaatacat 168
                ||||||||||||||||||||
Sbjct: 20791333 aacctactatctcaatacat 20791352
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>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1381_H04
          Length = 130961

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                         
Query: 351   atgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctcgcc 410
             |||||||||||||||||||| |||||  |||| ||||| || || || ||||| || |||
Sbjct: 20650 atgaccaccactcgcttgacacagttacccaccgagtgagtaacaggggacactcttgcc 20709

                                  
Query: 411   aggatcatgtacgacagcttc 431
             |||||||||||||||| ||||
Sbjct: 20710 aggatcatgtacgacaccttc 20730
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>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0592C05
          Length = 150478

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                          
Query: 351    atgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctcgcc 410
              |||||||||||||||||||| |||||  |||| ||||| || || || ||||| || |||
Sbjct: 120624 atgaccaccactcgcttgacacagttacccaccgagtgagtaacaggggacactcttgcc 120683

                                   
Query: 411    aggatcatgtacgacagcttc 431
              |||||||||||||||| ||||
Sbjct: 120684 aggatcatgtacgacaccttc 120704
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>gb|AF372833.1|AF372833 Oryza sativa phosphoenolpyruvate/phosphate translocator mRNA,
            complete cds
          Length = 1588

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                        
Query: 351  atgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctcgcc 410
            |||||||||||||||||||| |||||  |||| ||||| || || || ||||| || |||
Sbjct: 1143 atgaccaccactcgcttgacacagttacccaccgagtgagtaacaggggacactcttgcc 1084

                            
Query: 411  aggatcatgtacgaca 426
            ||||||||||||||||
Sbjct: 1083 aggatcatgtacgaca 1068
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                            
Query: 348      acgatgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctc 407
                ||||||||||| || ||||| || |||||| |||||||||| || || || |||||||||
Sbjct: 15591398 acgatgaccacgacacgcttaacacagttgcccacggagtgagtgacaggagacaccctc 15591339

                                        
Query: 408      gccaggatcatgtacgacagcttc 431
                || ||||||||||| |||| ||||
Sbjct: 15591338 gcgaggatcatgtaggacaccttc 15591315
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>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1119_B10
          Length = 148508

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                          
Query: 348    acgatgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctc 407
              ||||||||||| || ||||| || |||||| |||||||||| || || || |||||||||
Sbjct: 139156 acgatgaccacgacacgcttaacacagttgcccacggagtgagtgacaggagacaccctc 139097

                                      
Query: 408    gccaggatcatgtacgacagcttc 431
              || ||||||||||| |||| ||||
Sbjct: 139096 gcgaggatcatgtaggacaccttc 139073
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>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0410E11
          Length = 150200

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                         
Query: 348   acgatgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctc 407
             ||||||||||| || ||||| || |||||| |||||||||| || || || |||||||||
Sbjct: 25553 acgatgaccacgacacgcttaacacagttgcccacggagtgagtgacaggagacaccctc 25494

                                     
Query: 408   gccaggatcatgtacgacagcttc 431
             || ||||||||||| |||| ||||
Sbjct: 25493 gcgaggatcatgtaggacaccttc 25470
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>dbj|AK071036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080P10, full
            insert sequence
          Length = 1672

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                        
Query: 351  atgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctcgcc 410
            |||||||||||||||||||| |||||  |||| ||||| || || || ||||| || |||
Sbjct: 1210 atgaccaccactcgcttgacacagttacccaccgagtgagtaacaggggacactcttgcc 1151

                            
Query: 411  aggatcatgtacgaca 426
            ||||||||||||||||
Sbjct: 1150 aggatcatgtacgaca 1135
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>ref|XM_481795.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1550

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 348  acgatgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctc 407
            ||||||||||| || ||||| || |||||| |||||||||| || || || |||||||||
Sbjct: 1234 acgatgaccacgacacgcttaacacagttgcccacggagtgagtgacaggagacaccctc 1175

                               
Query: 408  gccaggatcatgtacgaca 426
            || ||||||||||| ||||
Sbjct: 1174 gcgaggatcatgtaggaca 1156
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>dbj|AK066618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073L11, full
            insert sequence
          Length = 1551

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 348  acgatgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctc 407
            ||||||||||| || ||||| || |||||| |||||||||| || || || |||||||||
Sbjct: 1235 acgatgaccacgacacgcttaacacagttgcccacggagtgagtgacaggagacaccctc 1176

                               
Query: 408  gccaggatcatgtacgaca 426
            || ||||||||||| ||||
Sbjct: 1175 gcgaggatcatgtaggaca 1157
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>dbj|AK059591.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D02, full
           insert sequence
          Length = 605

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                       
Query: 348 acgatgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctc 407
           ||||||||||| || ||||| || |||||| |||||||||| || || || |||||||||
Sbjct: 246 acgatgaccacgacacgcttaacacagttgcccacggagtgagtgacaggagacaccctc 187

                              
Query: 408 gccaggatcatgtacgaca 426
           || ||||||||||| ||||
Sbjct: 186 gcgaggatcatgtaggaca 168
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                         
Query: 329   gaagaagaggacggaagagacgatgaccaccactcgcttgacgcagttggccacggagtg 388
             ||||||||| ||||| |||||||||||||| ||||| ||||| |||||||| || || ||
Sbjct: 81928 gaagaagagaacggatgagacgatgaccacaactcgtttgacacagttggcaacagaatg 81869

                   
Query: 389   ggtcac 394
             ||||||
Sbjct: 81868 ggtcac 81863
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                           
Query: 329     gaagaagaggacggaagagacgatgaccaccactcgcttgacgcagttggccacggagtg 388
               ||||||||| ||||| |||||||||||||| ||||| ||||| |||||||| || || ||
Sbjct: 4195449 gaagaagagaacggatgagacgatgaccacaactcgtttgacacagttggcaacagaatg 4195390

                     
Query: 389     ggtcac 394
               ||||||
Sbjct: 4195389 ggtcac 4195384
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>gb|AY326794.1| Chlamydomonas reinhardtii putative phosphate/phosphoenolpyruvate
            translocator precursor (PPT2) mRNA, complete cds; nuclear
            gene for plastid product
          Length = 2235

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                        
Query: 348  acgatgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctc 407
            ||||| |||||||| ||||| ||||||||| | | |  ||| || ||||||| ||| | |
Sbjct: 1136 acgatcaccaccacgcgcttcacgcagttgccgatgctgtgcgtgacgggcgccacacgc 1077

                                                              
Query: 408  gccaggatcatgtacgacagcttctggtagccatggaagcagaggccggc 457
            | |||||||||||| ||||||| |||||||   |||||||||| ||||||
Sbjct: 1076 gacaggatcatgtaggacagctgctggtaggagtggaagcagatgccggc 1027
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>gb|AY104580.1| Zea mays PCO071161 mRNA sequence
          Length = 1561

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 351  atgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctcgcc 410
            ||||||||||| ||||||||||| ||| |||| || || || || || || ||||| || 
Sbjct: 1194 atgaccaccacacgcttgacgcaattgcccactgaatgtgtgactggggataccctggcg 1135

                                                   
Query: 411  aggatcatgtacgacagcttctggtagccatggaagcag 449
            ||||||||||| |||| ||  |||||  |||||||||||
Sbjct: 1134 aggatcatgtatgacacctgttggtatgcatggaagcag 1096
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>gb|U66404.1|ZMU66404 Zea mays plastid phosphate/phosphoenolpyruvate translocator precursor
            (MZPPT4) mRNA, complete cds
          Length = 1459

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 351  atgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctcgcc 410
            ||||||||||| ||||||||||| ||| |||| || || || || || || ||||| || 
Sbjct: 1086 atgaccaccacacgcttgacgcaattgcccactgaatgtgtgactggggataccctggcg 1027

                                                   
Query: 411  aggatcatgtacgacagcttctggtagccatggaagcag 449
            ||||||||||| |||| ||  |||||  |||||||||||
Sbjct: 1026 aggatcatgtatgacacctgttggtatgcatggaagcag 988
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>gb|U66403.1|ZMU66403 Zea mays plastid phosphate/phosphoenolpyruvate translocator precursor
            (MZPPT1) mRNA, complete cds
          Length = 1452

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 351  atgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctcgcc 410
            ||||||||||| ||||||||||| ||| |||| || || || || || || ||||| || 
Sbjct: 1150 atgaccaccacacgcttgacgcaattgcccactgaatgtgtgactggggataccctggcg 1091

                                                   
Query: 411  aggatcatgtacgacagcttctggtagccatggaagcag 449
            ||||||||||| |||| ||  |||||  |||||||||||
Sbjct: 1090 aggatcatgtatgacacctgttggtatgcatggaagcag 1052
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>gb|U66401.1|NTU66401 Nicotiana tabacum plastid phosphate/phosphoenolpyruvate translocator
            precursor (TABPPT8) mRNA, complete cds
          Length = 1638

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 312  ggggagatgggcgtccggaagaagaggacggaagagacgatgaccaccactcgcttgacg 371
            |||||||  ||||| ||||| ||||| || ||||  || ||||||||||||||||| || 
Sbjct: 1271 ggggagacaggcgtgcggaaaaagagaactgaagtcacaatgaccaccactcgcttcaca 1212

                                                              
Query: 372  cagttggccacggagtgggtcacgggcgacaccctcgccaggatcatgta 421
            || ||  ||||||| ||||| || || ||||||||| |||  ||||||||
Sbjct: 1211 caattacccacggaatgggtaacaggagacaccctctccaatatcatgta 1162
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>gb|AY177787.1| Chlamydomonas reinhardtii putative phosphate/phosphoenolpyruvate
            translocator precursor protein (PPT) mRNA, complete cds;
            nuclear gene for plastid product
          Length = 2057

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                        
Query: 349  cgatgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctcg 408
            |||||||||| || ||||| ||||||||| | | |  ||| ||||| |||||||| | ||
Sbjct: 1088 cgatgaccacaacccgcttcacgcagttgccgatgctgtgcgtcaccggcgacacgcgcg 1029

                                        
Query: 409  ccaggatcatgtacgacagcttctggta 436
              |||||||||||||||| || ||||||
Sbjct: 1028 ataggatcatgtacgacacctgctggta 1001
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>gb|U13632.1|BOU13632 Brassica oleracea var. botrytis non-green plastid
            phosphate/triose-phosphate translocator TPT precursor
            (BONGTPT) mRNA, complete cds
          Length = 1403

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                        
Query: 348  acgatgaccaccactcgcttgacgcagttggccacggagtgggtcacgggcgacaccctc 407
            |||||||||||||| ||||| || |||||  | || || || || ||||| || || |||
Sbjct: 1095 acgatgaccaccacacgcttcacacagtttcctacagaatgtgttacgggtgatactctc 1036

                                                        
Query: 408  gccaggatcatgtacgacagcttctggtagccatggaagcagag 451
            ||||  ||||||||||||| || ||||||  | |||||||||||
Sbjct: 1035 gccaatatcatgtacgacacctgctggtatgcgtggaagcagag 992
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>gb|U66402.1|NTU66402 Nicotiana tabacum plastid phosphate/phosphoenolpyruvate translocator
            precursor (TABPPT10) mRNA, complete cds
          Length = 1550

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 327  cggaagaagaggacggaagagacgatgaccaccactcgcttgacgcagtt 376
            ||||||||||| |||||||  || || |||||||||||||| || |||||
Sbjct: 1142 cggaagaagagcacggaagtcacaataaccaccactcgcttcacacagtt 1093
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>gb|BT012715.1| Lycopersicon esculentum clone 113597F, mRNA sequence
          Length = 1720

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 327 cggaagaagaggacggaagagacgatgaccaccactcgctt 367
           ||||||||||| |||||||  || || ||||||||||||||
Sbjct: 986 cggaagaagagaacggaagtcacaataaccaccactcgctt 946
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>gb|AC008791.5| Homo sapiens chromosome 5 clone CITB-H1_2040J22, complete sequence
          Length = 128182

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    caaatcttcaagaccaaaagt 72
             |||||||||||||||||||||
Sbjct: 10139 caaatcttcaagaccaaaagt 10119
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>gb|AC016614.6|AC016614 Homo sapiens chromosome 5 clone CTD-2217F15, complete sequence
          Length = 109314

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    caaatcttcaagaccaaaagt 72
             |||||||||||||||||||||
Sbjct: 11906 caaatcttcaagaccaaaagt 11886
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 392     cacgggcgacaccctcgcca 411
               ||||||||||||||||||||
Sbjct: 5096284 cacgggcgacaccctcgcca 5096265
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>gb|BC051097.1| Mus musculus FERM and PDZ domain containing 1, mRNA (cDNA clone
            IMAGE:4500789), partial cds
          Length = 3687

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 3346 tggaagcagaggccggccag 3327
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>gb|BC046469.1| Mus musculus FERM and PDZ domain containing 1, mRNA (cDNA clone
            IMAGE:5357039), partial cds
          Length = 2606

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 2262 tggaagcagaggccggccag 2243
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>gb|BC031840.1| Mus musculus FERM and PDZ domain containing 1, mRNA (cDNA clone
            IMAGE:4500789), partial cds
          Length = 3687

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 3346 tggaagcagaggccggccag 3327
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>ref|XM_975997.1| PREDICTED: Mus musculus similar to FERM and PDZ domain containing 1,
            transcript variant 1 (LOC669360), mRNA
          Length = 4089

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 3770 tggaagcagaggccggccag 3751
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>ref|XM_976029.1| PREDICTED: Mus musculus similar to FERM and PDZ domain containing 1,
            transcript variant 2 (LOC669360), mRNA
          Length = 4805

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 4486 tggaagcagaggccggccag 4467
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>ref|XM_976433.1| PREDICTED: Mus musculus similar to FERM and PDZ domain containing 1,
            transcript variant 1 (LOC674439), mRNA
          Length = 4518

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 3753 tggaagcagaggccggccag 3734
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>ref|XM_976475.1| PREDICTED: Mus musculus similar to FERM and PDZ domain containing 1,
            transcript variant 2 (LOC674439), mRNA
          Length = 5248

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 4483 tggaagcagaggccggccag 4464
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>ref|XM_898920.2| PREDICTED: Mus musculus similar to FERM and PDZ domain containing 1,
            transcript variant 2 (LOC666060), mRNA
          Length = 4535

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 3770 tggaagcagaggccggccag 3751
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>ref|XM_204152.5| PREDICTED: Mus musculus similar to FERM and PDZ domain containing 1,
            transcript variant 1 (LOC666060), mRNA
          Length = 5251

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 4486 tggaagcagaggccggccag 4467
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>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold
          Length = 574594

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 426    agcttctggtagccatggaa 445
              ||||||||||||||||||||
Sbjct: 282709 agcttctggtagccatggaa 282728
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 35      ttcaggagaggatgttacaa 54
               ||||||||||||||||||||
Sbjct: 2159825 ttcaggagaggatgttacaa 2159806
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>gb|AC157915.4| Mus musculus chromosome 19, clone RP24-294L7, complete sequence
          Length = 148975

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     aaaagtttggtctggccact 86
              ||||||||||||||||||||
Sbjct: 130370 aaaagtttggtctggccact 130389
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>emb|AL162757.2|NMA6Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment
              6/7
          Length = 326301

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    gtatctggaacagggaaaaa 220
              ||||||||||||||||||||
Sbjct: 143138 gtatctggaacagggaaaaa 143119
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>emb|AJ391256.1|NME391256 Neisseria meningitidis DNA for region 3 (prophage Pnm1 and gpxA) and
            flanking genes, strain Z2491
          Length = 44140

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  gtatctggaacagggaaaaa 220
            ||||||||||||||||||||
Sbjct: 4273 gtatctggaacagggaaaaa 4292
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>dbj|AK133351.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932441D01 product:FERM and PDZ domain
            containing 1, full insert sequence
          Length = 3693

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 2925 tggaagcagaggccggccag 2906
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>gb|AC055738.16| Homo sapiens 3 BAC RP11-234G11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157711

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aggagatttgccattattca 38
             ||||||||||||||||||||
Sbjct: 21384 aggagatttgccattattca 21403
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>gb|AC137157.3| Mus musculus BAC clone RP23-377M11 from chromosome 8, complete sequence
          Length = 187666

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    ctgtggcaagttctgtacaa 150
              ||||||||||||||||||||
Sbjct: 128713 ctgtggcaagttctgtacaa 128694
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>gb|AC105061.16| Mus musculus chromosome 19, clone RP23-117I10, complete sequence
          Length = 210038

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    aaaagtttggtctggccact 86
             ||||||||||||||||||||
Sbjct: 38603 aaaagtttggtctggccact 38622
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>ref|XM_233002.3| PREDICTED: Rattus norvegicus FERM and PDZ domain containing 1
            (predicted) (Frmpd1_predicted), mRNA
          Length = 4656

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 4436 tggaagcagaggccggccag 4417
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>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0569E11
          Length = 157319

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   aacctactatctcaatacat 168
             ||||||||||||||||||||
Sbjct: 66362 aacctactatctcaatacat 66381
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>emb|AL121841.5|CNS01DSS Human chromosome 14 DNA sequence BAC R-850C20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 207945

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aggagatttgccattattca 38
              ||||||||||||||||||||
Sbjct: 201524 aggagatttgccattattca 201505
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>emb|AL049831.2|CNS00008 Human chromosome 14 DNA sequence BAC R-330O19 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 218956

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   aggagatttgccattattca 38
            ||||||||||||||||||||
Sbjct: 7111 aggagatttgccattattca 7092
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>dbj|AK122409.1| Mus musculus mRNA for mKIAA0967 protein
          Length = 4439

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggaagcagaggccggccag 460
            ||||||||||||||||||||
Sbjct: 4112 tggaagcagaggccggccag 4093
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 206     tggaacagggaaaaaacatcttca 229
               |||||||||||||| |||||||||
Sbjct: 3362379 tggaacagggaaaagacatcttca 3362356
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>gb|AC142410.4| Mus musculus BAC clone RP24-173I18 from 1, complete sequence
          Length = 145213

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    gagatttgccattattcagg 40
             ||||||||||||||||||||
Sbjct: 40529 gagatttgccattattcagg 40548
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>gb|AC124516.4| Mus musculus BAC clone RP23-387C9 from 12, complete sequence
          Length = 236774

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 430    tctggtagccatggaagcagaggc 453
              ||||||||||||||| ||||||||
Sbjct: 196441 tctggtagccatggatgcagaggc 196464
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>emb|AL772285.9| Mouse DNA sequence from clone RP23-76I24 on chromosome 4, complete
             sequence
          Length = 153899

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   tggaagcagaggccggccag 460
             ||||||||||||||||||||
Sbjct: 82721 tggaagcagaggccggccag 82702
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>emb|AL627123.13| Mouse DNA sequence from clone RP23-351I23 on chromosome 4, complete
             sequence
          Length = 185022

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   ttgagcctggagtacaggta 271
             ||||||||||||||||||||
Sbjct: 80052 ttgagcctggagtacaggta 80071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,284,817
Number of Sequences: 3902068
Number of extensions: 4284817
Number of successful extensions: 75052
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 74824
Number of HSP's gapped (non-prelim): 229
length of query: 488
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 466
effective length of database: 17,147,199,772
effective search space: 7990595093752
effective search space used: 7990595093752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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