>ref|XM_465130.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1618

 Score =  186 bits (94), Expect = 4e-44
 Identities = 187/218 (85%)
 Strand = Plus / Minus

                                                                        
Query: 186  tgattgtaccgcagtatcactactgaaaccaaggctgccaggaagcgtgtcttaacacta 245
            ||||| |||||||| || ||||| ||||  || ||||| | || ||| ||||| ||||| 
Sbjct: 1328 tgattataccgcaggattactaccgaaatgaaagctgcaatgatgcgggtcttcacactg 1269

                                                                        
Query: 246  aacagattccagcacactgccactgctgtgcccgcaacgaatttcttgcgggggcaagac 305
            ||||  |||||||||| || ||||||||| |||||||||| |||||||||||| ||||||
Sbjct: 1268 aacatgttccagcacattgtcactgctgtacccgcaacgagtttcttgcggggacaagac 1209

                                                                        
Query: 306  ttccatgcttctagagcccgatctatcaaattctcagctatcgtatgaatttgagttgaa 365
            |||||||||||||||||||||||| ||||| | ||| || || ||||||||||  |||||
Sbjct: 1208 ttccatgcttctagagcccgatctctcaaaatttcaactctcttatgaatttggcttgaa 1149

                                                  
Query: 366  tagctgatataaagctttgggagtgtaaaactggtgaa 403
            |||| | |||||||||||||||||||||| ||||||||
Sbjct: 1148 tagcagctataaagctttgggagtgtaaagctggtgaa 1111

>dbj|AK110752.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-G08, full
            insert sequence
          Length = 1618

 Score =  186 bits (94), Expect = 4e-44
 Identities = 187/218 (85%)
 Strand = Plus / Minus

                                                                        
Query: 186  tgattgtaccgcagtatcactactgaaaccaaggctgccaggaagcgtgtcttaacacta 245
            ||||| |||||||| || ||||| ||||  || ||||| | || ||| ||||| ||||| 
Sbjct: 1328 tgattataccgcaggattactaccgaaatgaaagctgcaatgatgcgggtcttcacactg 1269

                                                                        
Query: 246  aacagattccagcacactgccactgctgtgcccgcaacgaatttcttgcgggggcaagac 305
            ||||  |||||||||| || ||||||||| |||||||||| |||||||||||| ||||||
Sbjct: 1268 aacatgttccagcacattgtcactgctgtacccgcaacgagtttcttgcggggacaagac 1209

                                                                        
Query: 306  ttccatgcttctagagcccgatctatcaaattctcagctatcgtatgaatttgagttgaa 365
            |||||||||||||||||||||||| ||||| | ||| || || ||||||||||  |||||
Sbjct: 1208 ttccatgcttctagagcccgatctctcaaaatttcaactctcttatgaatttggcttgaa 1149

                                                  
Query: 366  tagctgatataaagctttgggagtgtaaaactggtgaa 403
            |||| | |||||||||||||||||||||| ||||||||
Sbjct: 1148 tagcagctataaagctttgggagtgtaaagctggtgaa 1111

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  123 bits (62), Expect = 5e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                            
Query: 234      gtcttaacactaaacagattccagcacactgccactgctgtgcccgcaacgaatttcttg 293
                ||||| ||||| ||||  |||||||||| || ||||||||| |||||||||| |||||||
Sbjct: 11759486 gtcttcacactgaacatgttccagcacattgtcactgctgtacccgcaacgagtttcttg 11759427

                                                          
Query: 294      cgggggcaagacttccatgcttctagagcccgatctatcaaa 335
                ||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 11759426 cggggacaagacttccatgcttctagagcccgatctctcaaa 11759385



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                       
Query: 349      tatgaatttgagttgaatagctgatataaagctttgggagtgtaaaactggtgaa 403
                ||||||||||  ||||||||| | |||||||||||||||||||||| ||||||||
Sbjct: 11759281 tatgaatttggcttgaatagcagctataaagctttgggagtgtaaagctggtgaa 11759227



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 101      tcttctgtggccatttgctg 120
                ||||||||||||||||||||
Sbjct: 23259073 tcttctgtggccatttgctg 23259092

>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0477B05
          Length = 142166

 Score =  123 bits (62), Expect = 5e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                         
Query: 234   gtcttaacactaaacagattccagcacactgccactgctgtgcccgcaacgaatttcttg 293
             ||||| ||||| ||||  |||||||||| || ||||||||| |||||||||| |||||||
Sbjct: 67376 gtcttcacactgaacatgttccagcacattgtcactgctgtacccgcaacgagtttcttg 67317

                                                       
Query: 294   cgggggcaagacttccatgcttctagagcccgatctatcaaa 335
             ||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 67316 cggggacaagacttccatgcttctagagcccgatctctcaaa 67275



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                    
Query: 349   tatgaatttgagttgaatagctgatataaagctttgggagtgtaaaactggtgaa 403
             ||||||||||  ||||||||| | |||||||||||||||||||||| ||||||||
Sbjct: 67171 tatgaatttggcttgaatagcagctataaagctttgggagtgtaaagctggtgaa 67117

>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence
          Length = 1857073

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 15      atgggggagagattattattgt 36
               ||||||||||||||||||||||
Sbjct: 1355694 atgggggagagattattattgt 1355673

>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence
          Length = 1844853

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 15     atgggggagagattattattgt 36
              ||||||||||||||||||||||
Sbjct: 818747 atgggggagagattattattgt 818726

>gb|AC162930.5| Mus musculus BAC clone RP23-221B16 from chromosome 8, complete sequence
          Length = 222939

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 92     caacttcagtcttctgtggcc 112
              |||||||||||||||||||||
Sbjct: 153110 caacttcagtcttctgtggcc 153130

>emb|AL136528.11| Human DNA sequence from clone RP5-1092A11 on chromosome 1p36.2-36.33
             Contains the 5' end of the gene for a novel protein
             (FLJ32825), a novel gene (KIAA0495), two novel genes, the
             TP73 gene for tumor protein p73, the 5' end of the WDR8
             gene for WD repeat domain 8 and five CpG islands, complete
             sequence
          Length = 138941

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   cttctgtggccatttgctgat 122
             |||||||||||||||||||||
Sbjct: 38764 cttctgtggccatttgctgat 38784

>gb|AC161928.4| Mus musculus chromosome 1, clone RP23-293P15, complete sequence
          Length = 202671

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    gagagattattattgtaaata 41
             |||||||||||||||||||||
Sbjct: 72300 gagagattattattgtaaata 72320

>gb|AC100271.6| Mus musculus, clone RP23-77E14, complete sequence
          Length = 210574

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    gagagattattattgtaaata 41
             |||||||||||||||||||||
Sbjct: 26258 gagagattattattgtaaata 26278

>emb|AL591611.8| Mouse DNA sequence from clone RP23-228D6 on chromosome 4 Contains three
             novel genes, complete sequence
          Length = 140771

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    gatgggggagagattattatt 34
             |||||||||||||||||||||
Sbjct: 61090 gatgggggagagattattatt 61070

>gb|AC007529.5| Homo sapiens 12p13 BAC RPCI11-69C13 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 147239

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    attattattgtaaataaacaa 46
             |||||||||||||||||||||
Sbjct: 14409 attattattgtaaataaacaa 14429

>gb|AC018442.8| Homo sapiens chromosome 8, clone RP11-402L5, complete sequence
          Length = 192545

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 28     tattattgtaaataaacaaag 48
              |||||||||||||||||||||
Sbjct: 122012 tattattgtaaataaacaaag 121992

>gb|AF077625.1|HSP73S10 Homo sapiens p73 gene, exon 10
          Length = 1117

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 102 cttctgtggccatttgctgat 122
           |||||||||||||||||||||
Sbjct: 933 cttctgtggccatttgctgat 913

>gb|AC011595.13| Homo sapiens 12 BAC RP11-114F10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 152358

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 210   gaaaccaaggctgccaggaag 230
             |||||||||||||||||||||
Sbjct: 77175 gaaaccaaggctgccaggaag 77155

>gb|AC006080.1|AC006080 Homo sapiens chromosome 17, clone hRPK.394_K_10, complete sequence
          Length = 191111

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 6      aaccactagatgggggagaga 26
              |||||||||||||||||||||
Sbjct: 163662 aaccactagatgggggagaga 163642

>dbj|AP001573.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1915D9
          Length = 155174

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    tattattgtaaataaacaaag 48
             |||||||||||||||||||||
Sbjct: 98689 tattattgtaaataaacaaag 98669

>ref|XM_466550.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2139

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 tcttctgtggccatttgctg 120
           ||||||||||||||||||||
Sbjct: 960 tcttctgtggccatttgctg 979

>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on
             chromosome 15
          Length = 755217

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   ccagcacactgccactgctg 273
             ||||||||||||||||||||
Sbjct: 29120 ccagcacactgccactgctg 29139

>emb|CR759732.9| Zebrafish DNA sequence from clone DKEY-183E23 in linkage group 14,
              complete sequence
          Length = 225630

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     attattattgtaaataaaca 45
              ||||||||||||||||||||
Sbjct: 131510 attattattgtaaataaaca 131491

>emb|AL162493.21| Human DNA sequence from clone RP11-120L14 on chromosome 13, complete
            sequence
          Length = 158083

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   agattattattgtaaataaa 43
            ||||||||||||||||||||
Sbjct: 4326 agattattattgtaaataaa 4307

>emb|BX323998.7| Zebrafish DNA sequence from clone DKEYP-2C6 in linkage group 14, complete
              sequence
          Length = 172349

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     attattattgtaaataaaca 45
              ||||||||||||||||||||
Sbjct: 115721 attattattgtaaataaaca 115740

>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome
          Length = 305107

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 8     ccactagatgggggagagattattattg 35
             |||||||| |||||||||||| ||||||
Sbjct: 74380 ccactagaagggggagagattgttattg 74407

>gb|AY235044.1| Meleagris gallopavo clone MNT-031 microsatellite sequence
          Length = 547

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 tttgagttgaatagctgata 374
           ||||||||||||||||||||
Sbjct: 324 tttgagttgaatagctgata 343

>gb|AF369029.2| White spot syndrome virus, complete genome
          Length = 292967

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 8      ccactagatgggggagagattattattg 35
              |||||||| |||||||||||| ||||||
Sbjct: 123143 ccactagaagggggagagattgttattg 123170

>gb|AC006383.2|AC006383 Homo sapiens BAC clone RP11-498H20 from Y, complete sequence
          Length = 105210

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 379   gctttgggagtgtaaaactg 398
             ||||||||||||||||||||
Sbjct: 94806 gctttgggagtgtaaaactg 94787

>gb|AC090983.13| Homo sapiens chromosome 15, clone RP11-385H1, complete sequence
          Length = 203244

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   ccagcacactgccactgctg 273
             ||||||||||||||||||||
Sbjct: 58666 ccagcacactgccactgctg 58647

>gb|AC090602.16| Homo sapiens chromosome 15, clone RP11-125E1, complete sequence
          Length = 174707

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   ccagcacactgccactgctg 273
             ||||||||||||||||||||
Sbjct: 29120 ccagcacactgccactgctg 29139

>dbj|AP005384.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_D02
          Length = 112773

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tcttctgtggccatttgctg 120
             ||||||||||||||||||||
Sbjct: 18219 tcttctgtggccatttgctg 18238

>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome
          Length = 307287

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 8      ccactagatgggggagagattattattg 35
              |||||||| |||||||||||| ||||||
Sbjct: 108286 ccactagaagggggagagattgttattg 108313

>dbj|AK072807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140E08, full
            insert sequence
          Length = 2409

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  tcttctgtggccatttgctg 120
            ||||||||||||||||||||
Sbjct: 1230 tcttctgtggccatttgctg 1249

>emb|AL935131.7| Zebrafish DNA sequence from clone CH211-276G21, complete sequence
          Length = 170938

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     attattattgtaaataaaca 45
              ||||||||||||||||||||
Sbjct: 126016 attattattgtaaataaaca 125997

>dbj|AB049141.1| Candida tropicalis top2 gene for type II DNA topoisomerase, partial
           cds, strain:pk233
          Length = 2348

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  cccacggcaaatgcaacttc 98
           ||||||||||||||||||||
Sbjct: 747 cccacggcaaatgcaacttc 728


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,723,764
Number of Sequences: 3902068
Number of extensions: 3723764
Number of successful extensions: 71034
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70930
Number of HSP's gapped (non-prelim): 104
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)