Clone Name | rbart45a08 |
---|---|
Clone Library Name | barley_pub |
>gb|AY029319.1| Zea mays seven transmembrane protein Mlo8 mRNA, complete cds Length = 1798 Score = 250 bits (126), Expect = 3e-63 Identities = 207/234 (88%) Strand = Plus / Minus Query: 232 tcccttcttcatcttagccttctgagcccaacccagaacaccctgctgcacatgctcatt 291 |||||| |||||||| ||||||||||||| ||||| || ||||||||||||||||| || Sbjct: 1428 tccctttttcatcttgaccttctgagcccagcccaggacgccctgctgcacatgctcgtt 1369 Query: 292 gaagatctccttcttgtagaagcttcccatctgtgttacaattgcatacagaggcagggt 351 ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| ||| Sbjct: 1368 gaagatctccttcttgtagcagctccccatctgggttacaattgcatacagaggcaaggt 1309 Query: 352 gctgtagctgcagagaagctggatgatgagcccaataacaagcctcggcacaatgaaacc 411 ||||||||||||||||||||| || | | ||| || |||||||| |||||||| |||| Sbjct: 1308 gctgtagctgcagagaagctgaataaccaccccgatgacaagccttggcacaataaaacg 1249 Query: 412 gacttgccccatgatgcaggagttgaatccatatgtggtcagtatccagaagaa 465 ||||| ||||||||||| |||| ||||||||| ||| |||||||||||||||| Sbjct: 1248 aacttgtcccatgatgcacgagtcgaatccataagtgctcagtatccagaagaa 1195
>dbj|AK121347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121J07, full insert sequence Length = 2921 Score = 250 bits (126), Expect = 3e-63 Identities = 213/242 (88%) Strand = Plus / Minus Query: 226 cttgaatcccttcttcatcttagccttctgagcccaacccagaacaccctgctgcacatg 285 ||||| ||| ||| ||||||| ||||||| ||||| ||||| || ||||||||||| || Sbjct: 2312 cttgagtcctttcctcatcttgaccttctgtgcccagcccagcacgccctgctgcacgtg 2253 Query: 286 ctcattgaagatctccttcttgtagaagcttcccatctgtgttacaattgcatacagagg 345 || |||||||||||||||||||||||||| |||||||| || |||| |||||||||||| Sbjct: 2252 atcgttgaagatctccttcttgtagaagctccccatctgagtgacaactgcatacagagg 2193 Query: 346 cagggtgctgtagctgcagagaagctggatgatgagcccaataacaagcctcggcacaat 405 || |||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| || Sbjct: 2192 catggtgctgtagctgcagagaagctggatggtgaccccgataacaagcctcggcacgat 2133 Query: 406 gaaaccgacttgccccatgatgcaggagttgaatccatatgtggtcagtatccagaagaa 465 ||||| ||||||||||| |||||||| |||| || |||||||| |||||||||||||| Sbjct: 2132 gaaactaacttgccccattatgcaggaactgaacccgtatgtggtgagtatccagaagaa 2073 Query: 466 ga 467 || Sbjct: 2072 ga 2071
>gb|AY104078.1| Zea mays PCO070411 mRNA sequence Length = 1798 Score = 250 bits (126), Expect = 3e-63 Identities = 207/234 (88%) Strand = Plus / Minus Query: 232 tcccttcttcatcttagccttctgagcccaacccagaacaccctgctgcacatgctcatt 291 |||||| |||||||| ||||||||||||| ||||| || ||||||||||||||||| || Sbjct: 1428 tccctttttcatcttgaccttctgagcccagcccaggacgccctgctgcacatgctcgtt 1369 Query: 292 gaagatctccttcttgtagaagcttcccatctgtgttacaattgcatacagaggcagggt 351 ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| ||| Sbjct: 1368 gaagatctccttcttgtagcagctccccatctgggttacaattgcatacagaggcaaggt 1309 Query: 352 gctgtagctgcagagaagctggatgatgagcccaataacaagcctcggcacaatgaaacc 411 ||||||||||||||||||||| || | | ||| || |||||||| |||||||| |||| Sbjct: 1308 gctgtagctgcagagaagctgaataaccaccccgatgacaagccttggcacaataaaacg 1249 Query: 412 gacttgccccatgatgcaggagttgaatccatatgtggtcagtatccagaagaa 465 ||||| ||||||||||| |||| ||||||||| ||| |||||||||||||||| Sbjct: 1248 aacttgtcccatgatgcacgagtcgaatccataagtgctcagtatccagaagaa 1195
>gb|AY029316.1| Zea mays seven transmembrane protein Mlo5 mRNA, partial cds Length = 673 Score = 176 bits (89), Expect = 4e-41 Identities = 191/225 (84%) Strand = Plus / Minus Query: 243 tcttagccttctgagcccaacccagaacaccctgctgcacatgctcattgaagatctcct 302 |||| |||||||| ||||| ||||||| | ||||||||| ||||||| ||||||||||| Sbjct: 267 tcttggccttctgcgcccagcccagaaggctctgctgcacgtgctcatcgaagatctcct 208 Query: 303 tcttgtagaagcttcccatctgtgttacaattgcatacagaggcagggtgctgtagctgc 362 ||||| |||| | |||||||| || ||||| || ||||||||||||||||||||||| | Sbjct: 207 tcttgaagaaagtccccatctgcgtgacaatcgcgtacagaggcagggtgctgtagctac 148 Query: 363 agagaagctggatgatgagcccaataacaagcctcggcacaatgaaaccgacttgcccca 422 |||| |||||||||||| ||| | ||| ||||||||||||||||| ||| || ||| Sbjct: 147 agaggagctggatgatggccccgacaacgagcctcggcacaatgaaggggacgtggtcca 88 Query: 423 tgatgcaggagttgaatccatatgtggtcagtatccagaagaaga 467 |||||||||||||||| || || || ||||| ||||||||||||| Sbjct: 87 tgatgcaggagttgaaaccgtaggtagtcagaatccagaagaaga 43
>ref|NM_190204.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1509 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Minus Query: 218 ttgctcttcttgaatcccttcttcatcttagccttctgagcccaacccagaacaccctgc 277 ||||||| ||| || || ||| || |||| |||||||| |||||||| | || |||||| Sbjct: 1379 ttgctctccttcaaccctttcctcttcttggccttctgcgcccaaccaacaaggccctgc 1320 Query: 278 tgcacatgctcattgaagatctccttcttgtagaagcttcccatctgtgttacaattgca 337 ||||||||||| | |||||||||||||||| | ||| ||||||||||| ||||||||| Sbjct: 1319 tgcacatgctcgtcgaagatctccttcttgaaaaaggagcccatctgtgtgacaattgca 1260 Query: 338 tacagaggcagggtgctgtagctgcagag 366 || | ||||| ||| |||||||||||||| Sbjct: 1259 tatataggcaaggtactgtagctgcagag 1231 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 420 ccatgatgcaggagttgaatccatatgtggtcagtatccagaagaaga 467 ||||||||||||||||||| || || |||||||| ||||||||||||| Sbjct: 1177 ccatgatgcaggagttgaaaccgtaggtggtcagaatccagaagaaga 1130
>dbj|AK121374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C14, full insert sequence Length = 2115 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Minus Query: 218 ttgctcttcttgaatcccttcttcatcttagccttctgagcccaacccagaacaccctgc 277 ||||||| ||| || || ||| || |||| |||||||| |||||||| | || |||||| Sbjct: 1639 ttgctctccttcaaccctttcctcttcttggccttctgcgcccaaccaacaaggccctgc 1580 Query: 278 tgcacatgctcattgaagatctccttcttgtagaagcttcccatctgtgttacaattgca 337 ||||||||||| | |||||||||||||||| | ||| ||||||||||| ||||||||| Sbjct: 1579 tgcacatgctcgtcgaagatctccttcttgaaaaaggagcccatctgtgtgacaattgca 1520 Query: 338 tacagaggcagggtgctgtagctgcagag 366 || | ||||| ||| |||||||||||||| Sbjct: 1519 tatataggcaaggtactgtagctgcagag 1491 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 420 ccatgatgcaggagttgaatccatatgtggtcagtatccagaagaaga 467 ||||||||||||||||||| || || |||||||| ||||||||||||| Sbjct: 1437 ccatgatgcaggagttgaaaccgtaggtggtcagaatccagaagaaga 1390
>dbj|AK072733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141N06, full insert sequence Length = 1089 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Minus Query: 218 ttgctcttcttgaatcccttcttcatcttagccttctgagcccaacccagaacaccctgc 277 ||||||| ||| || || ||| || |||| |||||||| |||||||| | || |||||| Sbjct: 784 ttgctctccttcaaccctttcctcttcttggccttctgcgcccaaccaacaaggccctgc 725 Query: 278 tgcacatgctcattgaagatctccttcttgtagaagcttcccatctgtgttacaattgca 337 ||||||||||| | |||||||||||||||| | ||| ||||||||||| ||||||||| Sbjct: 724 tgcacatgctcgtcgaagatctccttcttgaaaaaggagcccatctgtgtgacaattgca 665 Query: 338 tacagaggcagggtgctgtagctgcagag 366 || | ||||| ||| |||||||||||||| Sbjct: 664 tatataggcaaggtactgtagctgcagag 636 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 420 ccatgatgcaggagttgaatccatatgtggtcagtatccagaagaaga 467 ||||||||||||||||||| || || |||||||| ||||||||||||| Sbjct: 582 ccatgatgcaggagttgaaaccgtaggtggtcagaatccagaagaaga 535
>gb|AF323026.1| Zea mays transposon Frequent flyer, complete sequence; Mlo gene, partial sequence Length = 543 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 232 tcccttcttcatcttagccttctgagcccaacccagaacaccctgctgcacatgctcatt 291 |||||| |||||||| ||||||||||||| ||||| || ||||||||||||||||| || Sbjct: 346 tccctttttcatcttgaccttctgagcccagcccaggacgccctgctgcacatgctcgtt 405 Query: 292 gaagatctccttcttgtagaagcttcccatct 323 ||| ||||||||||||||| |||| ||||||| Sbjct: 406 gaacatctccttcttgtagcagctccccatct 437
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 226 cttgaatcccttcttcatcttagccttctgagcccaacccagaacaccctgctgcacatg 285 ||||| ||| ||| ||||||| ||||||| ||||| ||||| || ||||||||||| || Sbjct: 13072 cttgagtcctttcctcatcttgaccttctgtgcccagcccagcacgccctgctgcacgtg 13131 Query: 286 ctcattgaagatctccttcttgtagaagcttcccatct 323 || |||||||||||||||||||||||||| ||||||| Sbjct: 13132 atcgttgaagatctccttcttgtagaagctccccatct 13169 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 329 acaattgcatacagaggcagggtgctgtagctgcagagaagctggatg 376 |||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 13261 acaactgcatacagaggcatggtgctgtagctgcagagaagctggatg 13308 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 386 ataacaagcctcggcacaatgaaaccgacttgccccatgatgcaggagttgaatccatat 445 ||||||||||||||||| ||||||| ||||||||||| |||||||| |||| || ||| Sbjct: 13400 ataacaagcctcggcacgatgaaactaacttgccccattatgcaggaactgaacccgtat 13459 Query: 446 gtggtc 451 |||||| Sbjct: 13460 gtggtc 13465
>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05, complete sequence Length = 107407 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 226 cttgaatcccttcttcatcttagccttctgagcccaacccagaacaccctgctgcacatg 285 ||||| ||| ||| ||||||| ||||||| ||||| ||||| || ||||||||||| || Sbjct: 74917 cttgagtcctttcctcatcttgaccttctgtgcccagcccagcacgccctgctgcacgtg 74976 Query: 286 ctcattgaagatctccttcttgtagaagcttcccatct 323 || |||||||||||||||||||||||||| ||||||| Sbjct: 74977 atcgttgaagatctccttcttgtagaagctccccatct 75014 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 329 acaattgcatacagaggcagggtgctgtagctgcagagaagctggatg 376 |||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 75106 acaactgcatacagaggcatggtgctgtagctgcagagaagctggatg 75153 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 386 ataacaagcctcggcacaatgaaaccgacttgccccatgatgcaggagttgaatccatat 445 ||||||||||||||||| ||||||| ||||||||||| |||||||| |||| || ||| Sbjct: 75245 ataacaagcctcggcacgatgaaactaacttgccccattatgcaggaactgaacccgtat 75304 Query: 446 gtggtc 451 |||||| Sbjct: 75305 gtggtc 75310
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 226 cttgaatcccttcttcatcttagccttctgagcccaacccagaacaccctgctgcacatg 285 ||||| ||| ||| ||||||| ||||||| ||||| ||||| || ||||||||||| || Sbjct: 20341327 cttgagtcctttcctcatcttgaccttctgtgcccagcccagcacgccctgctgcacgtg 20341386 Query: 286 ctcattgaagatctccttcttgtagaagcttcccatct 323 || |||||||||||||||||||||||||| ||||||| Sbjct: 20341387 atcgttgaagatctccttcttgtagaagctccccatct 20341424 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 329 acaattgcatacagaggcagggtgctgtagctgcagagaagctggatg 376 |||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 20341516 acaactgcatacagaggcatggtgctgtagctgcagagaagctggatg 20341563 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 386 ataacaagcctcggcacaatgaaaccgacttgccccatgatgcaggagttgaatccatat 445 ||||||||||||||||| ||||||| ||||||||||| |||||||| |||| || ||| Sbjct: 20341655 ataacaagcctcggcacgatgaaactaacttgccccattatgcaggaactgaacccgtat 20341714 Query: 446 gtggtc 451 |||||| Sbjct: 20341715 gtggtc 20341720
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 218 ttgctcttcttgaatcccttcttcatcttagccttctgagcccaacccagaacaccctgc 277 ||||||| ||| || || ||| || |||| |||||||| |||||||| | || |||||| Sbjct: 38624710 ttgctctccttcaaccctttcctcttcttggccttctgcgcccaaccaacaaggccctgc 38624651 Query: 278 tgcacatgctcattgaagatctccttcttg 307 ||||||||||| | |||||||||||||||| Sbjct: 38624650 tgcacatgctcgtcgaagatctccttcttg 38624621 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 322 ctgtgttacaattgcatacagaggcagggtgctgtagctgcagag 366 |||||| ||||||||||| | ||||| ||| |||||||||||||| Sbjct: 38624494 ctgtgtgacaattgcatatataggcaaggtactgtagctgcagag 38624450 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 420 ccatgatgcaggagttgaatccatatgtggtc 451 ||||||||||||||||||| || || |||||| Sbjct: 38624308 ccatgatgcaggagttgaaaccgtaggtggtc 38624277
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 218 ttgctcttcttgaatcccttcttcatcttagccttctgagcccaacccagaacaccctgc 277 ||||||| ||| || || ||| || |||| |||||||| |||||||| | || |||||| Sbjct: 145391 ttgctctccttcaaccctttcctcttcttggccttctgcgcccaaccaacaaggccctgc 145332 Query: 278 tgcacatgctcattgaagatctccttcttg 307 ||||||||||| | |||||||||||||||| Sbjct: 145331 tgcacatgctcgtcgaagatctccttcttg 145302 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 322 ctgtgttacaattgcatacagaggcagggtgctgtagctgcagag 366 |||||| ||||||||||| | ||||| ||| |||||||||||||| Sbjct: 145175 ctgtgtgacaattgcatatataggcaaggtactgtagctgcagag 145131 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 420 ccatgatgcaggagttgaatccatatgtggtc 451 ||||||||||||||||||| || || |||||| Sbjct: 144989 ccatgatgcaggagttgaaaccgtaggtggtc 144958
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 218 ttgctcttcttgaatcccttcttcatcttagccttctgagcccaacccagaacaccctgc 277 ||||||| ||| || || ||| || |||| |||||||| |||||||| | || |||||| Sbjct: 82683 ttgctctccttcaaccctttcctcttcttggccttctgcgcccaaccaacaaggccctgc 82624 Query: 278 tgcacatgctcattgaagatctccttcttg 307 ||||||||||| | |||||||||||||||| Sbjct: 82623 tgcacatgctcgtcgaagatctccttcttg 82594 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 322 ctgtgttacaattgcatacagaggcagggtgctgtagctgcagag 366 |||||| ||||||||||| | ||||| ||| |||||||||||||| Sbjct: 82467 ctgtgtgacaattgcatatataggcaaggtactgtagctgcagag 82423 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 420 ccatgatgcaggagttgaatccatatgtggtc 451 ||||||||||||||||||| || || |||||| Sbjct: 82281 ccatgatgcaggagttgaaaccgtaggtggtc 82250
>gb|BT009402.1| Triticum aestivum clone wlm96.pk046.j8:fis, full insert mRNA sequence Length = 1350 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 329 acaattgcatacagaggcagggtgctgtagctgcagag 366 ||||| || ||||| ||||||||||||||||||||||| Sbjct: 739 acaatggcgtacagcggcagggtgctgtagctgcagag 702
>ref|NM_129974.1| Arabidopsis thaliana MLO15; calmodulin binding AT2G44110 (MLO15) transcript variant AT2G44110.1 mRNA, complete cds Length = 1496 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 314 cttcccatctgtgttacaattgcatacagaggcagggtgctgtagctgcagagaagctg 372 ||||||||||| ||||| | |||||| || || | ||| ||||| |||||||||||||| Sbjct: 1268 cttcccatctgagttacgagtgcatagagcggtaaggtactgtaactgcagagaagctg 1210
>ref|NM_201957.1| Arabidopsis thaliana MLO15; calmodulin binding AT2G44110 (MLO15) transcript variant AT2G44110.2 mRNA, complete cds Length = 1639 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 314 cttcccatctgtgttacaattgcatacagaggcagggtgctgtagctgcagagaagctg 372 ||||||||||| ||||| | |||||| || || | ||| ||||| |||||||||||||| Sbjct: 1284 cttcccatctgagttacgagtgcatagagcggtaaggtactgtaactgcagagaagctg 1226
>gb|AC092782.2| Homo sapiens chromosome 1 clone RP11-411G13, complete sequence Length = 155355 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 315 ttcccatctgtgttacaattgcataca 341 |||| |||||||||||||||||||||| Sbjct: 107103 ttcctatctgtgttacaattgcataca 107077
>gb|AC161252.2| Mus musculus BAC clone RP24-167E3 from chromosome 13, complete sequence Length = 158432 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 7 gtataatgatggcacattctaag 29 ||||||||||||||||||||||| Sbjct: 96814 gtataatgatggcacattctaag 96792
>emb|BX820977.1|CNS0A9OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZH06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1637 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 314 cttcccatctgtgttacaattgcatacagaggcagggtgctgtagctgcagagaagctg 372 ||||||||||| ||||| | |||||| || || | ||| ||||| |||||||||||||| Sbjct: 1279 cttcccatctgagttacgagtgcatagagcggtaaggtactgtaactgcagagaagctg 1221
>emb|BX820553.1|CNS0A9J2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH47ZG01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1578 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 314 cttcccatctgtgttacaattgcatacagaggcagggtgctgtagctgcagagaagctg 372 ||||||||||| ||||| | |||||| || || | ||| ||||| |||||||||||||| Sbjct: 1284 cttcccatctgagttacgagtgcatagagcggtaaggtactgtaactgcagagaagctg 1226
>gb|AF369576.1| Arabidopsis thaliana membrane protein Mlo15 mRNA, complete cds Length = 1496 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 314 cttcccatctgtgttacaattgcatacagaggcagggtgctgtagctgcagagaagctg 372 ||||||||||| ||||| | |||||| || || | ||| ||||| |||||||||||||| Sbjct: 1268 cttcccatctgagttacgagtgcatagagcggtaaggtactgtaactgcagagaagctg 1210
>ref|NM_102433.1| Arabidopsis thaliana MLO14; calmodulin binding AT1G26700 (MLO14) mRNA, complete cds Length = 1733 Score = 44.1 bits (22), Expect = 0.40 Identities = 40/46 (86%) Strand = Plus / Minus Query: 315 ttcccatctgtgttacaattgcatacagaggcagggtgctgtagct 360 |||||||||| || |||| |||||| || ||||| ||||||||||| Sbjct: 1359 ttcccatctgagtgacaagtgcatagagtggcagtgtgctgtagct 1314
>ref|XM_583302.2| PREDICTED: Bos taurus similar to Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein) (LOC506805), mRNA Length = 15464 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 atgctcattgaagatctccttcttgt 308 ||||||||||||||| |||||||||| Sbjct: 8082 atgctcattgaagatgtccttcttgt 8057
>gb|AF312225.1|AF312225 Homo sapiens chromosome 2 map 2q37.1, complete sequence Length = 345102 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 tgatggcacattctaagtgctt 34 |||||||||||||||||||||| Sbjct: 60294 tgatggcacattctaagtgctt 60315
>gb|AC019130.6| Homo sapiens BAC clone RP11-563E16 from 2, complete sequence Length = 139049 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 tgatggcacattctaagtgctt 34 |||||||||||||||||||||| Sbjct: 63407 tgatggcacattctaagtgctt 63428
>gb|AF369575.1| Arabidopsis thaliana membrane protein Mlo14 mRNA, complete cds Length = 1733 Score = 44.1 bits (22), Expect = 0.40 Identities = 40/46 (86%) Strand = Plus / Minus Query: 315 ttcccatctgtgttacaattgcatacagaggcagggtgctgtagct 360 |||||||||| || |||| |||||| || ||||| ||||||||||| Sbjct: 1359 ttcccatctgagtgacaagtgcatagagtggcagtgtgctgtagct 1314
>ref|XM_509040.1| PREDICTED: Pan troglodytes myeloid/lymphoid or mixed-lineage leukemia 2 (LOC451873), mRNA Length = 15939 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgctcattgaagatctccttcttgt 308 |||||||||||||| |||||||||| Sbjct: 9488 tgctcattgaagatatccttcttgt 9464
>ref|NM_003482.1| Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 2 (MLL2), mRNA Length = 15789 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgctcattgaagatctccttcttgt 308 |||||||||||||| |||||||||| Sbjct: 8381 tgctcattgaagatatccttcttgt 8357
>ref|XM_994259.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 2 (Mll2), mRNA Length = 6639 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgctcattgaagatctccttcttgt 308 |||||||||||||| |||||||||| Sbjct: 707 tgctcattgaagatgtccttcttgt 683
>ref|XM_619357.3| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 2 (Mll2), mRNA Length = 6639 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgctcattgaagatctccttcttgt 308 |||||||||||||| |||||||||| Sbjct: 707 tgctcattgaagatgtccttcttgt 683
>emb|AL136984.20| Human DNA sequence from clone RP11-52A20 on chromosome 1q24.1-24.3 Contains part of the POU2F1 gene for POU domain class 2 transcription factor 1, complete sequence Length = 169627 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 ctgtgttacaattgcatacag 342 ||||||||||||||||||||| Sbjct: 97699 ctgtgttacaattgcatacag 97679
>gb|AC161165.5| Mus musculus chromosome 15, clone RP23-278C10, complete sequence Length = 176135 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgctcattgaagatctccttcttgt 308 |||||||||||||| |||||||||| Sbjct: 59609 tgctcattgaagatgtccttcttgt 59633
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 344 ggcagggtgctgtagctgcagagaagctggatgatga 380 ||||| ||||||||||||||||| | ||||| ||||| Sbjct: 5446401 ggcagcgtgctgtagctgcagagcacctggacgatga 5446365
>gb|AC011603.37| Homo sapiens 12 BAC RP11-386G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174400 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgctcattgaagatctccttcttgt 308 |||||||||||||| |||||||||| Sbjct: 120768 tgctcattgaagatatccttcttgt 120744
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 344 ggcagggtgctgtagctgcagagaagctggatgatga 380 ||||| ||||||||||||||||| | ||||| ||||| Sbjct: 99982 ggcagcgtgctgtagctgcagagcacctggacgatga 99946
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 accctgctgcacatgctcatt 291 ||||||||||||||||||||| Sbjct: 2191564 accctgctgcacatgctcatt 2191584
>gb|AF010404.1|AF010404 Homo sapiens ALR mRNA, complete cds Length = 14874 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgctcattgaagatctccttcttgt 308 |||||||||||||| |||||||||| Sbjct: 7466 tgctcattgaagatatccttcttgt 7442
>gb|AF010403.1|AF010403 Homo sapiens ALR mRNA, complete cds Length = 15789 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgctcattgaagatctccttcttgt 308 |||||||||||||| |||||||||| Sbjct: 8381 tgctcattgaagatatccttcttgt 8357
>dbj|AB209494.1| Homo sapiens mRNA for myeloid/lymphoid or mixed-lineage leukemia 2 variant protein Length = 8227 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgctcattgaagatctccttcttgt 308 |||||||||||||| |||||||||| Sbjct: 708 tgctcattgaagatatccttcttgt 684
>ref|XM_493809.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 316 tcccatctgtgttacaattgcatacagaggcagggtgctgtagctgca 363 |||||||||||| || | ||| || ||||| | ||||||||||||||| Sbjct: 1287 tcccatctgtgtgacgagtgcgtagagagggaaggtgctgtagctgca 1240
>ref|XM_464475.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1476 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 350 gtgctgtagctgcagagaagctggatgatgagcccaataacaag 393 ||||||||||||||||| | ||||| ||||| |||||| |||| Sbjct: 1176 gtgctgtagctgcagagcacctggacgatgattccaatagcaag 1133
>gb|AY737650.1| Hylobates leucogenys candidate bitter taste receptor t2r7 gene, partial cds Length = 758 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tggtcagtatccagaagaag 466 |||||||||||||||||||| Sbjct: 208 tggtcagtatccagaagaag 189
>ref|XM_617584.2| PREDICTED: Bos taurus similar to Dystrophin-related protein 2 (LOC537422), mRNA Length = 2874 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 catgctcattgaagatctcc 301 |||||||||||||||||||| Sbjct: 1300 catgctcattgaagatctcc 1281
>ref|XM_365021.1| Magnaporthe grisea 70-15 hypothetical protein (MG09866.4) partial mRNA Length = 2004 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 agagaagctggatgatgagc 382 |||||||||||||||||||| Sbjct: 1827 agagaagctggatgatgagc 1846
>gb|BC060605.1| Mus musculus dystrophin related protein 2, mRNA (cDNA clone IMAGE:5719555), partial cds Length = 4416 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 catgctcattgaagatctcc 301 |||||||||||||||||||| Sbjct: 1307 catgctcattgaagatctcc 1288
>gb|AC007384.3| Homo sapiens BAC clone RP11-325F22 from 7, complete sequence Length = 170842 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tgtgttacaattgcatacag 342 |||||||||||||||||||| Sbjct: 24786 tgtgttacaattgcatacag 24767
>emb|AL451140.15| Human DNA sequence from clone RP11-540H22 on chromosome 9 Contains the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 187738 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ctgtagctgcagagaagctg 372 |||||||||||||||||||| Sbjct: 23680 ctgtagctgcagagaagctg 23699
>ref|XM_502108.1| Yarrowia lipolytica CLIB122, YALI0C21824g predicted mRNA Length = 573 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 caccctgctgcacatgctca 289 |||||||||||||||||||| Sbjct: 102 caccctgctgcacatgctca 121
>emb|AL355351.18| Human DNA sequence from clone RP11-337M11 on chromosome 6, complete sequence Length = 42047 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tgtgttacaattgcatacag 342 |||||||||||||||||||| Sbjct: 22217 tgtgttacaattgcatacag 22198
>ref|XM_963240.1| PREDICTED: Tribolium castaneum similar to CG6259-PA (LOC656734), mRNA Length = 890 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 tcttcttgaatcccttcttcatct 245 ||||||||||| |||||||||||| Sbjct: 422 tcttcttgaattccttcttcatct 399
>gb|AC090213.6| Homo sapiens chromosome 18, clone RP11-760L24, complete sequence Length = 170907 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tgtgttacaattgcatacag 342 |||||||||||||||||||| Sbjct: 88995 tgtgttacaattgcatacag 89014 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tgtgttacaattgcatacag 342 |||||||||||||||||||| Sbjct: 86574 tgtgttacaattgcatacag 86593
>gb|AC108482.1| Homo sapiens chromosome 5 clone RP11-107N7, complete sequence Length = 166716 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 caccctgctgcacatgctca 289 |||||||||||||||||||| Sbjct: 70304 caccctgctgcacatgctca 70323
>dbj|AK158102.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930029B12 product:dystrophin related protein 2, full insert sequence Length = 3827 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 catgctcattgaagatctcc 301 |||||||||||||||||||| Sbjct: 1338 catgctcattgaagatctcc 1319
>gb|AC010776.10| Homo sapiens chromosome 18, clone RP11-2N1, complete sequence Length = 181252 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tgtgttacaattgcatacag 342 |||||||||||||||||||| Sbjct: 167149 tgtgttacaattgcatacag 167168 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tgtgttacaattgcatacag 342 |||||||||||||||||||| Sbjct: 164730 tgtgttacaattgcatacag 164749
>dbj|AK081426.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130016K19 product:dystrophin related protein 2, full insert sequence Length = 3753 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 catgctcattgaagatctcc 301 |||||||||||||||||||| Sbjct: 1480 catgctcattgaagatctcc 1461
>gb|DQ295240.1| Uncultured marine bacterium Ant29B7, partial genomic sequence Length = 40351 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 gcacaatgaaaccgacttgc 418 |||||||||||||||||||| Sbjct: 21469 gcacaatgaaaccgacttgc 21450
>gb|AC096721.2| Homo sapiens BAC clone RP11-19C24 from 4, complete sequence Length = 161824 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 acattctaagtgctttcatt 39 |||||||||||||||||||| Sbjct: 45630 acattctaagtgctttcatt 45649
>dbj|AB199043.1| Hylobates agilis Hyag-T2R7 gene for bitter taste receptor T2R7, partial cds Length = 765 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tggtcagtatccagaagaag 466 |||||||||||||||||||| Sbjct: 203 tggtcagtatccagaagaag 184
>gb|AC024578.3|AC024578 Homo sapiens chromosome 5 clone CTD-2363K11, complete sequence Length = 109685 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 caccctgctgcacatgctca 289 |||||||||||||||||||| Sbjct: 6691 caccctgctgcacatgctca 6672
>gb|AC025594.5|AC025594 Homo sapiens chromosome 7 clone RP11-309L24, complete sequence Length = 200197 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 tcttagccttctgagcccaa 262 |||||||||||||||||||| Sbjct: 173613 tcttagccttctgagcccaa 173594
>gb|AF384030.1| Oryza sativa seven transmembrane protein MLO2 mRNA, complete cds Length = 1740 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 316 tcccatctgtgttacaattgcatacagaggcagggtgctgtagctgca 363 |||||||||||| || | ||| || ||||| | ||||||||||||||| Sbjct: 1342 tcccatctgtgtgacgagtgcgtagagagggaaggtgctgtagctgca 1295
>gb|AC018639.8|AC018639 Human Chromosome 7 clone RP11-128A6, complete sequence Length = 157579 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 tcttagccttctgagcccaa 262 |||||||||||||||||||| Sbjct: 1506 tcttagccttctgagcccaa 1487
>gb|AF244923.1|AF244923 Spinacia oleracea peroxidase prx14 precursor, mRNA, complete cds Length = 1320 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ttgctcttcttgaatcccttcttc 241 |||||| ||||||||||||||||| Sbjct: 550 ttgctcctcttgaatcccttcttc 527
>dbj|AK111990.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-H06, full insert sequence Length = 1992 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 316 tcccatctgtgttacaattgcatacagaggcagggtgctgtagctgca 363 |||||||||||| || | ||| || ||||| | ||||||||||||||| Sbjct: 1446 tcccatctgtgtgacgagtgcgtagagagggaaggtgctgtagctgca 1399
>gb|AC002430.1|AC002430 Human BAC clone CTB-66D11 from 7q22, complete sequence Length = 140856 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tgtgttacaattgcatacag 342 |||||||||||||||||||| Sbjct: 5303 tgtgttacaattgcatacag 5284
>dbj|AK098993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098A12, full insert sequence Length = 2005 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 316 tcccatctgtgttacaattgcatacagaggcagggtgctgtagctgca 363 |||||||||||| || | ||| || ||||| | ||||||||||||||| Sbjct: 1449 tcccatctgtgtgacgagtgcgtagagagggaaggtgctgtagctgca 1402
>dbj|AK066134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N01, full insert sequence Length = 1474 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 350 gtgctgtagctgcagagaagctggatgatgagcccaataacaag 393 ||||||||||||||||| | ||||| ||||| |||||| |||| Sbjct: 1175 gtgctgtagctgcagagcacctggacgatgattccaatagcaag 1132
>gb|U43520.1|MMU43520 Mus musculus dystrophin-related protein 2 (DRP2) mRNA, partial cds Length = 1428 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 catgctcattgaagatctcc 301 |||||||||||||||||||| Sbjct: 130 catgctcattgaagatctcc 111
>ref|NM_010078.1| Mus musculus dystrophin related protein 2 (Drp2), mRNA Length = 3753 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 catgctcattgaagatctcc 301 |||||||||||||||||||| Sbjct: 1480 catgctcattgaagatctcc 1461
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 caccctgctgcacatgctca 289 |||||||||||||||||||| Sbjct: 2922705 caccctgctgcacatgctca 2922724
>emb|AL672064.17| Mouse DNA sequence from clone RP23-91G19 on chromosome X, complete sequence Length = 152177 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 catgctcattgaagatctcc 301 |||||||||||||||||||| Sbjct: 40757 catgctcattgaagatctcc 40738 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,135,489 Number of Sequences: 3902068 Number of extensions: 4135489 Number of successful extensions: 77334 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77152 Number of HSP's gapped (non-prelim): 179 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)