>YIAH_ECOLI (P37669) Inner membrane protein yiaH|
          Length = 331

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
 Frame = +1

Query: 130 IHTPTFRQTNKHCLSPVTW----------RVTAPIQLLRGRVCILNVSSLSQKKALRAGV 279
           IHT T+  TN H +SPVTW          RV+ P+  +          S   +  LR G+
Sbjct: 22  IHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIGL 81

>EPIPL_MOUSE (Q8R0W0) Epiplakin|
          Length = 6548

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 162  ALPVPGNVARDRTHSITSWPCLHSQCIFALSKKSPACRC 278
            A+ VP N+ R + HS++ W  LHS+ + A  ++     C
Sbjct: 1460 AMKVPINMGRFQGHSVSLWDLLHSEYVGAEKRRELVALC 1498

>EREG_MOUSE (Q61521) Epiregulin precursor|
          Length = 162

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 222 CLHSQCIFALSKKSPACRCK 281
           CLH QCI+ +  +   CRC+
Sbjct: 69  CLHGQCIYLVDMREKFCRCE 88

>YQM4_SCHPO (Q9UU83) Protein P1E11.04c in chromosome III|
          Length = 425

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 91  NSGVQRHTPAREGIHTPTFRQTNKHCLSPVTWRVTAPI 204
           ++     TP  +G++T +   +N   L+P T RV  P+
Sbjct: 10  STATSSQTPQEDGVYTSSLHNSNNPFLAPKTERVADPV 47


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,153,462
Number of Sequences: 219361
Number of extensions: 1002544
Number of successful extensions: 2551
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2544
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)