ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart45a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PER24_ARATH (Q9ZV04) Peroxidase 24 precursor (EC 1.11.1.7) (Atpe... 43 4e-04
2PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atpe... 42 0.001
3PER39_ARATH (Q9SUT2) Peroxidase 39 precursor (EC 1.11.1.7) (Atpe... 39 0.008
4PER36_ARATH (Q9SD46) Peroxidase 36 precursor (EC 1.11.1.7) (Atpe... 37 0.039
5PER8_ARATH (Q9LNL0) Peroxidase 8 precursor (EC 1.11.1.7) (Atpero... 32 1.3
6PER65_ARATH (Q9FJR1) Peroxidase 65 precursor (EC 1.11.1.7) (Atpe... 32 1.3
7Q300_MOUSE (Q02722) Protein Q300 32 1.3
8PER43_ARATH (Q9SZH2) Peroxidase 43 precursor (EC 1.11.1.7) (Atpe... 31 2.2
9SNX9_HUMAN (Q9Y5X1) Sorting nexin-9 (SH3 and PX domain-containin... 30 3.7
10PER3_ARATH (O23044) Peroxidase 3 precursor (EC 1.11.1.7) (Atpero... 30 3.7
11ANKK1_MOUSE (Q8BZ25) Ankyrin repeat and protein kinase domain-co... 30 3.7
12PER52_ARATH (Q9FLC0) Peroxidase 52 precursor (EC 1.11.1.7) (Atpe... 30 3.7
13GLGA_THIDA (Q3SH79) Glycogen synthase (EC 2.4.1.21) (Starch [bac... 30 4.8
14CR023_HUMAN (Q8NB54) Protein C18orf23 30 4.8
15PER41_ARATH (O23609) Peroxidase 41 precursor (EC 1.11.1.7) (Atpe... 30 4.8
16PER49_ARATH (O23237) Peroxidase 49 precursor (EC 1.11.1.7) (Atpe... 30 4.8
17SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3 30 4.8
18PER59_ARATH (Q39034) Peroxidase 59 precursor (EC 1.11.1.7) (Atpe... 29 6.3
19PER2_ZINEL (Q4W1I9) Basic peroxidase precursor 2 (EC 1.11.1.7) (... 29 6.3
20PER1_ZINEL (Q4W1I8) Basic peroxidase precursor 1 (EC 1.11.1.7) (... 29 6.3
21DHX9_XENLA (Q68FK8) ATP-dependent RNA helicase A-like protein (E... 29 6.3
22AEGP_RAT (Q63191) Apical endosomal glycoprotein precursor 29 6.3
23PER15_ARATH (Q9SI16) Peroxidase 15 precursor (EC 1.11.1.7) (Atpe... 29 8.2

>PER24_ARATH (Q9ZV04) Peroxidase 24 precursor (EC 1.11.1.7) (Atperox P24)|
           (ATP47)
          Length = 350

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 27/68 (39%), Positives = 37/68 (54%)
 Frame = -2

Query: 395 VIDKKVLFTSDAVLNSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEI 216
           ++  K LFTSDA L +  +   +      +GA+  +F  +M  M  I V T+GD QG EI
Sbjct: 284 LLKNKGLFTSDAALLTDPSAAHIASVFQNSGAFLAQFGRSMIKMSSIKVLTLGD-QGGEI 342

Query: 215 RKVCWRVN 192
           RK C  VN
Sbjct: 343 RKNCRLVN 350



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>PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atperox P55)|
           (ATP20a)
          Length = 330

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = -2

Query: 395 VIDKKVLFTSD-AVLNSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAE 219
           ++ +K LFTSD A+ N   +   V   AN A  +   F SAM N+G++GVK +G+Q   E
Sbjct: 265 LVARKGLFTSDQALFNDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVK-VGNQ--GE 321

Query: 218 IRKVCWRVN 192
           IR+ C   N
Sbjct: 322 IRRDCSAFN 330



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>PER39_ARATH (Q9SUT2) Peroxidase 39 precursor (EC 1.11.1.7) (Atperox P39)|
           (ATP19a)
          Length = 326

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
 Frame = -2

Query: 395 VIDKKVLFTSDAVLNSTETITQVTENANVAGAWERKF----ESAMENMGKIGVKTMGDQQ 228
           V+ ++ LF SDA L  T     + +    AG  E++F     ++ME MG+IGVKT  D  
Sbjct: 260 VLKRRGLFESDAAL--TMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSD-- 315

Query: 227 GAEIRKVCWRVN 192
             EIR+ C  VN
Sbjct: 316 -GEIRRTCAFVN 326



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>PER36_ARATH (Q9SD46) Peroxidase 36 precursor (EC 1.11.1.7) (Atperox P36)|
          Length = 336

 Score = 36.6 bits (83), Expect = 0.039
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
 Frame = -2

Query: 395 VIDKKVLFTSDAVL--NSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGA 222
           +++ + L +SD +L   S ET+  V   A   GA+  +F  +M  MG I   T  D    
Sbjct: 267 LVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTD---G 323

Query: 221 EIRKVCWRVNN 189
           EIR++C RVN+
Sbjct: 324 EIRRICRRVNH 334



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>PER8_ARATH (Q9LNL0) Peroxidase 8 precursor (EC 1.11.1.7) (Atperox P8)|
          Length = 310

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 24/81 (29%), Positives = 38/81 (46%)
 Frame = -2

Query: 431 PRRSG*AVLSEWVIDKKVLFTSDAVLNSTETITQVTENANVAGAWERKFESAMENMGKIG 252
           P R    +  + +  + +L   D ++    T + V++ A     ++  F  AM+ MG+IG
Sbjct: 233 PFRVDNEIYRQMIQQRAILRIDDNLIRDGSTRSIVSDFAYNNKLFKESFAEAMQKMGEIG 292

Query: 251 VKTMGDQQGAEIRKVCWRVNN 189
           V T GD    EIR  C   NN
Sbjct: 293 VLT-GD--SGEIRTNCRAFNN 310



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>PER65_ARATH (Q9FJR1) Peroxidase 65 precursor (EC 1.11.1.7) (Atperox P65)|
           (ATP43)
          Length = 334

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = -2

Query: 377 LFTSDAVL---NSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKV 207
           L  SD +L   NST+    +   A    A+   F  AME +G +GVK  GD+ G E+R+ 
Sbjct: 271 LLASDHILIKDNSTKPFVDLY--ATNETAFFEDFARAMEKLGTVGVK--GDKDG-EVRRR 325

Query: 206 CWRVNN 189
           C   NN
Sbjct: 326 CDHFNN 331



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>Q300_MOUSE (Q02722) Protein Q300|
          Length = 77

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 90 WFSYTKIMYACVCQCVCLFRCI 25
          W   T + Y CVC CVC+  C+
Sbjct: 18 WEGETNLFYVCVCVCVCVCVCV 39



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>PER43_ARATH (Q9SZH2) Peroxidase 43 precursor (EC 1.11.1.7) (Atperox P43)|
          Length = 326

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
 Frame = -2

Query: 404 SEWVIDKKVL---------FTSDAVLNSTETITQVTE------NANVAGAWERKFESAME 270
           SE + DK++L           +DA L    T  QV +      N      +E  F  A+ 
Sbjct: 244 SERLFDKQILQNIKDGFAVLQTDAGLYEDVTTRQVVDSYLGMLNPFFGPTFESDFVKAIV 303

Query: 269 NMGKIGVKTMGDQQGAEIRKVCWRVN 192
            MGKIGVKT       EIR+VC   N
Sbjct: 304 KMGKIGVKT---GFKGEIRRVCSAFN 326



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>SNX9_HUMAN (Q9Y5X1) Sorting nexin-9 (SH3 and PX domain-containing protein 1)|
           (SDP1 protein)
          Length = 595

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -3

Query: 292 GSSRVPWRIWAKSGSRPWETSK---AQRSGRYAGESTTNAGQYSVA 164
           GS   PW  W+ S S  WE+S+   AQ  G  A  +T     +  A
Sbjct: 102 GSGNDPWSAWSASKSGNWESSEGWGAQPEGAGAQRNTNTPNNWDTA 147



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>PER3_ARATH (O23044) Peroxidase 3 precursor (EC 1.11.1.7) (Atperox P3) (Rare|
           cold-inducible protein) (RCI3A) (ATPRC)
          Length = 326

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -2

Query: 395 VIDKKVLFTSDAVLNSTETITQVTEN--ANVAGAWERKFESAMENMGKIGVKT 243
           V+ ++ LF SD+ L +  T             G++  +F  +ME MG+I VKT
Sbjct: 259 VLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKT 311



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>ANKK1_MOUSE (Q8BZ25) Ankyrin repeat and protein kinase domain-containing|
           protein 1 (EC 2.7.11.1)
          Length = 745

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 165 ATEY*PALVVDSPAYLPDLCALLVSHGLDPDFA 263
           A+ Y P L+       PDLCALL++HG D + A
Sbjct: 401 ASGYTPLLIATQDQQ-PDLCALLLAHGADTNLA 432



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>PER52_ARATH (Q9FLC0) Peroxidase 52 precursor (EC 1.11.1.7) (Atperox P52)|
           (ATP49)
          Length = 324

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = -2

Query: 395 VIDKKVLFTSDAVL-NSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAE 219
           ++ ++ L  SD VL N   T + V   +N   ++   F +AM  MG I   T       E
Sbjct: 259 LMTQRGLLHSDQVLFNGGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLT---GSSGE 315

Query: 218 IRKVCWRVN 192
           IRKVC R N
Sbjct: 316 IRKVCGRTN 324



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>GLGA_THIDA (Q3SH79) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial|
           glycogen] synthase)
          Length = 493

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +3

Query: 123 HRGIR-HGAGQLPRIATEY*PALVVDSPAYLPDLCALLVSHGLD---PDFAHILHGTL 284
           H G+  HG   + +    Y  A+   SP Y  ++C     +GLD       H LHG L
Sbjct: 193 HEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGLDGLLRSRRHKLHGIL 250



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>CR023_HUMAN (Q8NB54) Protein C18orf23|
          Length = 160

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = -1

Query: 99  CRCW---FSYTKIMYACVCQCVCLFRCI 25
           C C    ++ ++ + ACVC CVCL+ C+
Sbjct: 42  CLCMTVAYTGSRCLGACVCVCVCLYVCV 69



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>PER41_ARATH (O23609) Peroxidase 41 precursor (EC 1.11.1.7) (Atperox P41)|
          Length = 326

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -2

Query: 377 LFTSDAVLNSTETITQVTE-NANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKVCW 201
           L  SD +L    +     E  AN   A+   F  AME +G++GVK  G++ G E+R+ C 
Sbjct: 263 LLASDHILFKDPSTRPFVELYANNQTAFFEDFARAMEKLGRVGVK--GEKDG-EVRRRCD 319

Query: 200 RVN 192
             N
Sbjct: 320 HFN 322



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>PER49_ARATH (O23237) Peroxidase 49 precursor (EC 1.11.1.7) (Atperox P49)|
           (ATP31)
          Length = 331

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = -2

Query: 395 VIDKKVLFTSDAVLNSTETITQ--VTENANVAGAWERKFESAMENMGKIGVKTMGDQQGA 222
           +I+ K L  SD VL S+   ++  V + A   G +  +F  +M  MG I   T       
Sbjct: 264 LIENKGLLNSDQVLFSSNEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPLT---GSSG 320

Query: 221 EIRKVCWRVNN 189
           EIRK C ++N+
Sbjct: 321 EIRKNCRKINS 331



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>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3|
          Length = 465

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -1

Query: 93  CWF--SYTKIMYACVCQCVCLFRCI-ISK*LCVF 1
           CW+  S    +  CVC CVC++ C+ + +  CV+
Sbjct: 362 CWYLCSILSSVCVCVCVCVCMYVCMCVMESACVY 395



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>PER59_ARATH (Q39034) Peroxidase 59 precursor (EC 1.11.1.7) (Atperox P59)|
           (Peroxidase N) (ATPN)
          Length = 328

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = -2

Query: 383 KVLFTSDAVLNSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKVC 204
           ++LF+SD  +N+T+ + +    +     + R F  AM  MG I     G     E+R  C
Sbjct: 271 QILFSSDLAVNTTKKLVEAYSRSQ--SLFFRDFTCAMIRMGNISNGASG-----EVRTNC 323

Query: 203 WRVNN 189
             +NN
Sbjct: 324 RVINN 328



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>PER2_ZINEL (Q4W1I9) Basic peroxidase precursor 2 (EC 1.11.1.7) (ZePrx33.44)|
           (ZePrx34.70)
          Length = 321

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -2

Query: 395 VIDKKVLFTSDAVLNSTETITQVTENANVAGAWERKFESAMENMGKIGVKT 243
           V  + +L +   + N+  T + VTE  N    +   F +AM  M +IGV T
Sbjct: 257 VTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVT 307



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>PER1_ZINEL (Q4W1I8) Basic peroxidase precursor 1 (EC 1.11.1.7) (ZePrx33.44)|
           (ZePrx34.70)
          Length = 321

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -2

Query: 395 VIDKKVLFTSDAVLNSTETITQVTENANVAGAWERKFESAMENMGKIGVKT 243
           V  + +L +   + N+  T + VTE  N    +   F +AM  M +IGV T
Sbjct: 257 VTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVT 307



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>DHX9_XENLA (Q68FK8) ATP-dependent RNA helicase A-like protein (EC 3.6.1.-)|
           (Nuclear DNA helicase II) (NDH II) (DEAH box protein 9)
          Length = 1262

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 285 ELPLPRPGHVRVFCHLRYRFSRVEHGVRGEQHFLVN 392
           E  LPRP    +FC +     ++E G+RG  H +V+
Sbjct: 478 ESVLPRPHASMLFCTVGVLLRKLESGIRGISHVIVD 513



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>AEGP_RAT (Q63191) Apical endosomal glycoprotein precursor|
          Length = 1216

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -3

Query: 253 GSRPWETSKAQRSGRYAGESTTNAGQYSVAMRGSW 149
           G   W+ ++AQ SG+ A ++  NA  + +++R +W
Sbjct: 508 GKLQWQRAEAQESGKPARDTNRNAPGHFLSLRKAW 542



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>PER15_ARATH (Q9SI16) Peroxidase 15 precursor (EC 1.11.1.7) (Atperox P15)|
           (ATP36)
          Length = 338

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 14/95 (14%)
 Frame = -2

Query: 431 PRRSG*AVLSEWVIDK---------KVLFTSDAVLNSTETITQVTENAN-----VAGAWE 294
           PR  G   LSE  I+          K L  +  +LNS E +    E +       A   E
Sbjct: 243 PRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYAEDQE 302

Query: 293 RKFESAMENMGKIGVKTMGDQQGAEIRKVCWRVNN 189
             FE   E+M K+G  +       EIRK C ++NN
Sbjct: 303 EFFEQFAESMIKMGNISPLTGSSGEIRKNCRKINN 337


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,814,797
Number of Sequences: 219361
Number of extensions: 1235464
Number of successful extensions: 3301
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3291
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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