ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart44h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 74 1e-13
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 57 1e-08
3XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 52 3e-07
4CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 48 5e-06
5CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 45 3e-05
6CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 44 1e-04
7CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 42 5e-04
8CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 41 7e-04
9CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 41 9e-04
10CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1... 37 0.012
11CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14) 37 0.016
12CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14) 36 0.028
13CONB_CANEN (P49347) Concanavalin B precursor (Con B) 36 0.028
14CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Solub... 30 1.5
15HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.... 30 1.5
16VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI) 29 3.4
17MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p... 28 4.4
18FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor 28 4.4
19SP1_HORSE (P81121) Seminal plasma protein HSP-1 28 5.8
20FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Floccul... 28 7.5
21LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precurso... 27 9.8
22PPID_MOUSE (Q9CR16) 40 kDa peptidyl-prolyl cis-trans isomerase (... 27 9.8
23NFASC_CHICK (O42414) Neurofascin precursor 27 9.8

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 31/51 (60%), Positives = 40/51 (78%)
 Frame = -3

Query: 318 YLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166
           Y+GL A ++   +VHPKN+YYGV  V QK  NYGG+M+W+RY DK+TNYSS
Sbjct: 248 YVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
 Frame = -3

Query: 321 IYLGLPASEQ--KVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAIQWA 148
           +YLGL A+    K   V  K LYY ++  VQKA NYGG+M+W+R+ DK+T Y      WA
Sbjct: 245 VYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
 Frame = -3

Query: 321 IYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 169
           +Y+GL AS EQ   ++  K+LYY ++Q V+   NYGG+ +++RY DK+ NY+
Sbjct: 236 VYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
 Frame = -3

Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166
           I+LGLPA+ +  G  YV P  L   ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 240 IFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = -3

Query: 318 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166
           +LGLPA+ +  G  Y+ P  L   ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 244 FLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = -3

Query: 318 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166
           ++GLPAS    G  ++    L   ++ V++++  YGGVM+W +Y D ++ YSS
Sbjct: 243 FMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
 Frame = -3

Query: 321 IYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166
           ++LG+PAS+      G +    L   V+  ++ +  YGGVM+W+R+ D ++ YS+
Sbjct: 233 VFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
 Frame = -3

Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 157
           ++LG+PAS    G  ++    L   V+  ++ ++ YGGVM+W+R+ D ++ YS   I
Sbjct: 239 LFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295



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>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 40.8 bits (94), Expect = 9e-04
 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
 Frame = -3

Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166
           +Y+GLPA++   G  Y+  + L   V+  ++ ++ YGGVM+W R  D +  YSS
Sbjct: 235 LYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288



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>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)|
          Length = 293

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = -3

Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166
           I+LGLPAS    G  ++    L   V+  ++ +A YGGVM+W +  D  + YSS
Sbjct: 236 IFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287



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>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 292

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
 Frame = -3

Query: 321 IYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 187
           +Y+GLPA+ +     G++    L   V+  ++ ++NYGGVM+W +  D
Sbjct: 233 LYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280



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>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 291

 Score = 35.8 bits (81), Expect = 0.028
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = -3

Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166
           I+LGLPA++   G  ++    L   V+ ++  +  YGGVM+W ++ D    YSS
Sbjct: 234 IFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSS 285



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>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 35.8 bits (81), Expect = 0.028
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = -3

Query: 321 IYLGLPASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERYEDKRTNYSSYAIQ 154
           ++L LPAS+      GY+ P  L   V+  +      Y G+ +W R  DK T YS+  I+
Sbjct: 247 LFLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIR 306

Query: 153 W 151
           +
Sbjct: 307 Y 307



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>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall|
           protein 2)
          Length = 562

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -3

Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 199
           ++LGLP S    G  Y+   +L    I  +  ++++GG+ +W+
Sbjct: 244 LFLGLPGSASAAGSGYISDTSLLESTIADIASSSSFGGIALWD 286



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>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 350

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 303 ASEQKVGYVHPKNLYYGVIQVVQKA 229
           A  +++GYVHP   YYG +  VQ A
Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126



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>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)|
          Length = 623

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 273 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 151
           P  +  GV++V++    Y GV +W  R  D  + Y+++ + W
Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319



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>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -2

Query: 280  RSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQL 164
            RSS  P  RR  GGA GG   RG G   L+  A  ++ L
Sbjct: 1029 RSSSFPGRRRPRGGAHGG---RGRGRARLKSTASSIETL 1064



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>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor|
          Length = 873

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 275 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 171
           +QR  T+A Y        + GSWSG     SGQ+T
Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647



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>SP1_HORSE (P81121) Seminal plasma protein HSP-1|
          Length = 120

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 290 RSVTFIQRTSTTASYRWCRRRPTMAGSW 207
           R   +   T T + YRWC    T +GSW
Sbjct: 41  RGYRYYDCTRTDSFYRWCSLTGTYSGSW 68



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>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)|
          Length = 1075

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -1

Query: 269 RTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATPSNG 150
           RT TTAS       P     W+G  T TS ++T  T +NG
Sbjct: 313 RTPTTASTITTTTEP-----WTGTFTSTSTEMTTVTGTNG 347



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>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor|
           1)
          Length = 909

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 276 HPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 175
           HP  LY  +  V+     +GG +VW+ +  K TN
Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867



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>PPID_MOUSE (Q9CR16) 40 kDa peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)|
           (PPIase) (Rotamase) (Cyclophilin-40) (CYP-40)
          Length = 369

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = +3

Query: 18  YKAHNFTLAILIHCKVSKHMHMHMQYTDGYNKSTR*RSERRRVKPIGWRSCCNLSAC 188
           +K+ N+ +AI  + KV       ++Y D  +K+   +++R R++PI      N+ AC
Sbjct: 233 FKSQNWEMAIKKYAKV-------LRYVDS-SKAVIEKADRSRLQPIALSCVLNIGAC 281



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>NFASC_CHICK (O42414) Neurofascin precursor|
          Length = 1369

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = -1

Query: 275  IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATP---SNGLDPPSLRSSP 120
            +QRT   + YR+  R  T  G     V  +   +  ATP   S  L PP+   +P
Sbjct: 1015 VQRTDPISRYRFFLRARTQVGDGEVIVEESPALLNEATPTPASTWLPPPTTELTP 1069


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,563,193
Number of Sequences: 219361
Number of extensions: 754478
Number of successful extensions: 2597
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2597
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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