Clone Name | rbart44h11 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 73.6 bits (179), Expect = 1e-13 Identities = 31/51 (60%), Positives = 40/51 (78%) Frame = -3 Query: 318 YLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166 Y+GL A ++ +VHPKN+YYGV V QK NYGG+M+W+RY DK+TNYSS Sbjct: 248 YVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 57.0 bits (136), Expect = 1e-08 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%) Frame = -3 Query: 321 IYLGLPASEQ--KVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAIQWA 148 +YLGL A+ K V K LYY ++ VQKA NYGG+M+W+R+ DK+T Y WA Sbjct: 245 VYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/52 (44%), Positives = 37/52 (71%), Gaps = 1/52 (1%) Frame = -3 Query: 321 IYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 169 +Y+GL AS EQ ++ K+LYY ++Q V+ NYGG+ +++RY DK+ NY+ Sbjct: 236 VYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 48.1 bits (113), Expect = 5e-06 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Frame = -3 Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166 I+LGLPA+ + G YV P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 240 IFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 45.4 bits (106), Expect = 3e-05 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%) Frame = -3 Query: 318 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166 +LGLPA+ + G Y+ P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 244 FLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 43.9 bits (102), Expect = 1e-04 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%) Frame = -3 Query: 318 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166 ++GLPAS G ++ L ++ V++++ YGGVM+W +Y D ++ YSS Sbjct: 243 FMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 41.6 bits (96), Expect = 5e-04 Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Frame = -3 Query: 321 IYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166 ++LG+PAS+ G + L V+ ++ + YGGVM+W+R+ D ++ YS+ Sbjct: 233 VFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 41.2 bits (95), Expect = 7e-04 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -3 Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 157 ++LG+PAS G ++ L V+ ++ ++ YGGVM+W+R+ D ++ YS I Sbjct: 239 LFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 40.8 bits (94), Expect = 9e-04 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Frame = -3 Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166 +Y+GLPA++ G Y+ + L V+ ++ ++ YGGVM+W R D + YSS Sbjct: 235 LYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 37.0 bits (84), Expect = 0.012 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Frame = -3 Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166 I+LGLPAS G ++ L V+ ++ +A YGGVM+W + D + YSS Sbjct: 236 IFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 36.6 bits (83), Expect = 0.016 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%) Frame = -3 Query: 321 IYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 187 +Y+GLPA+ + G++ L V+ ++ ++NYGGVM+W + D Sbjct: 233 LYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 35.8 bits (81), Expect = 0.028 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Frame = -3 Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 166 I+LGLPA++ G ++ L V+ ++ + YGGVM+W ++ D YSS Sbjct: 234 IFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSS 285
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 35.8 bits (81), Expect = 0.028 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = -3 Query: 321 IYLGLPASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERYEDKRTNYSSYAIQ 154 ++L LPAS+ GY+ P L V+ + Y G+ +W R DK T YS+ I+ Sbjct: 247 LFLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIR 306 Query: 153 W 151 + Sbjct: 307 Y 307
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -3 Query: 321 IYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 199 ++LGLP S G Y+ +L I + ++++GG+ +W+ Sbjct: 244 LFLGLPGSASAAGSGYISDTSLLESTIADIASSSSFGGIALWD 286
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 303 ASEQKVGYVHPKNLYYGVIQVVQKA 229 A +++GYVHP YYG + VQ A Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126
>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)| Length = 623 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -3 Query: 273 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 151 P + GV++V++ Y GV +W R D + Y+++ + W Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = -2 Query: 280 RSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQL 164 RSS P RR GGA GG RG G L+ A ++ L Sbjct: 1029 RSSSFPGRRRPRGGAHGG---RGRGRARLKSTASSIETL 1064
>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor| Length = 873 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 275 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 171 +QR T+A Y + GSWSG SGQ+T Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647
>SP1_HORSE (P81121) Seminal plasma protein HSP-1| Length = 120 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -1 Query: 290 RSVTFIQRTSTTASYRWCRRRPTMAGSW 207 R + T T + YRWC T +GSW Sbjct: 41 RGYRYYDCTRTDSFYRWCSLTGTYSGSW 68
>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)| Length = 1075 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -1 Query: 269 RTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATPSNG 150 RT TTAS P W+G T TS ++T T +NG Sbjct: 313 RTPTTASTITTTTEP-----WTGTFTSTSTEMTTVTGTNG 347
>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor| 1) Length = 909 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 276 HPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 175 HP LY + V+ +GG +VW+ + K TN Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867
>PPID_MOUSE (Q9CR16) 40 kDa peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-40) (CYP-40) Length = 369 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/57 (28%), Positives = 31/57 (54%) Frame = +3 Query: 18 YKAHNFTLAILIHCKVSKHMHMHMQYTDGYNKSTR*RSERRRVKPIGWRSCCNLSAC 188 +K+ N+ +AI + KV ++Y D +K+ +++R R++PI N+ AC Sbjct: 233 FKSQNWEMAIKKYAKV-------LRYVDS-SKAVIEKADRSRLQPIALSCVLNIGAC 281
>NFASC_CHICK (O42414) Neurofascin precursor| Length = 1369 Score = 27.3 bits (59), Expect = 9.8 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = -1 Query: 275 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATP---SNGLDPPSLRSSP 120 +QRT + YR+ R T G V + + ATP S L PP+ +P Sbjct: 1015 VQRTDPISRYRFFLRARTQVGDGEVIVEESPALLNEATPTPASTWLPPPTTELTP 1069 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,563,193 Number of Sequences: 219361 Number of extensions: 754478 Number of successful extensions: 2597 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 2507 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2597 length of database: 80,573,946 effective HSP length: 83 effective length of database: 62,366,983 effective search space used: 1496807592 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)