>T1RH_METJA (Q60295) Putative type-1 restriction enzyme MjaXP R protein (EC|
           3.1.21.3) (Putative type I restriction enzyme MjaXP R
           protein)
          Length = 1042

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
 Frame = -3

Query: 413 AYKVGDK-----NEWSYYKVAIP----LAQLRSVNPSTSRTNAAEKYIQVVSVDNHEFWF 261
           +YK G +     NE   Y+ AI     +  ++++NP  +   A + Y  V ++DN +F  
Sbjct: 47  SYKHGSELTPEYNERESYRDAILKNRFIKAIKNINPWLTEELALKVYKTVTNIDNPDFNM 106

Query: 260 MGFVYYDNAVKHLQEALQE 204
            G ++Y+  +  ++   +E
Sbjct: 107 RGKIFYEMLINGVKLEFKE 125

>SCNNG_RABIT (Q28738) Amiloride-sensitive sodium channel gamma-subunit|
           (Epithelial Na+ channel gamma subunit) (Gamma ENaC)
           (Nonvoltage-gated sodium channel 1 gamma subunit)
           (SCNEG) (Gamma NaCH)
          Length = 653

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
 Frame = +2

Query: 143 CMYNAC*SKPIDITKLAKYGPPGVLPAGALQHCRSTQSP*TKTRDYR------QRPPGCI 304
           C+Y+   +K ++    A+Y  P  LP  A  +C   Q P      Y+      Q   GC 
Sbjct: 398 CLYSCFQTKMVEKCGCAQYSQP--LPPAA-NYCNYQQHPNWMYCYYQLYQAFVQEELGCQ 454

Query: 305 SQLRLFCSLKD*LTSAGLAGWQPCNSSTHFYP 400
           S  +  CS K+   +  LA W    S     P
Sbjct: 455 SVCKQSCSFKEWALTTSLAQWPSAVSEKWLLP 486

>S6A11_MOUSE (P31650) Sodium- and chloride-dependent GABA transporter 4 (GAT4)|
          Length = 627

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 167 WTSMHYTYSCGILYMSTMNWELPVCSLIGVAIC 69
           W       S GI ++  + WEL +C L G  IC
Sbjct: 202 WERRVLAISDGIEHIGNLRWELALCLLAGWTIC 234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,991,625
Number of Sequences: 219361
Number of extensions: 1675088
Number of successful extensions: 3954
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3952
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)